RNA–Protein interactions for RNA: ENST00000598364.1

SYMPK-211, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-211ENST00000598364 NISCHQ9Y2I1 1504 aa37.71■■■■□ 3.63
SYMPK-211ENST00000598364 ABCC9O60706 1549 aa34.61■■■■□ 3.13
SYMPK-211ENST00000598364 CCDC180Q9P1Z9 1646 aa34■■■■□ 3.03
SYMPK-211ENST00000598364 DNAJC5BQ9UF47 199 aa33.09■■■□□ 2.89
SYMPK-211ENST00000598364 RB1CC1Q8TDY2 1594 aa32.65■■■□□ 2.82
SYMPK-211ENST00000598364 NACADO15069 1562 aa32.32■■■□□ 2.76
SYMPK-211ENST00000598364 PABPN1Q86U42 306 aaKnown RBP eCLIP32.18■■■□□ 2.741e-6■■■□□ 16.2
SYMPK-211ENST00000598364 DCAF8L2P0C7V8 631 aa32.02■■■□□ 2.72
SYMPK-211ENST00000598364 UNC13AQ9UPW8 1703 aa31.92■■■□□ 2.7
SYMPK-211ENST00000598364 BICRAQ9NZM4 1560 aa31.81■■■□□ 2.68
SYMPK-211ENST00000598364 MYO15BQ96JP2 1530 aa31.72■■■□□ 2.67
SYMPK-211ENST00000598364 SHROOM4Q9ULL8 1493 aa31.25■■■□□ 2.59
SYMPK-211ENST00000598364 CECR2Q9BXF3 1484 aa31.24■■■□□ 2.59
SYMPK-211ENST00000598364 CC2D2AQ9P2K1 1620 aa31.23■■■□□ 2.59
SYMPK-211ENST00000598364 ZCCHC6Q5VYS8 1495 aaKnown RBP31.14■■■□□ 2.58
SYMPK-211ENST00000598364 DCAF1Q9Y4B6 1507 aa31.11■■■□□ 2.57
SYMPK-211ENST00000598364 EIF4G1Q04637 1599 aaKnown RBP31.04■■■□□ 2.56
SYMPK-211ENST00000598364 SCRIBQ14160 1630 aa30.98■■■□□ 2.55
SYMPK-211ENST00000598364 DNAJC5Q9H3Z4 198 aa30.72■■■□□ 2.51
SYMPK-211ENST00000598364 CUX2O14529 1486 aa30.04■■■□□ 2.4
SYMPK-211ENST00000598364 NCAPD3P42695 1498 aa29.9■■■□□ 2.38
SYMPK-211ENST00000598364 ERCC6Q03468 1493 aa29.86■■■□□ 2.37
SYMPK-211ENST00000598364 ATAD2BQ9ULI0 1458 aa29.73■■■□□ 2.35
SYMPK-211ENST00000598364 NESP48681 1621 aa29.61■■■□□ 2.33
SYMPK-211ENST00000598364 HMGXB3Q12766 1538 aa29.57■■■□□ 2.32
SYMPK-211ENST00000598364 SMARCA2P51531 1590 aa29.53■■■□□ 2.32
SYMPK-211ENST00000598364 SMARCA4P51532 1647 aa29.51■■■□□ 2.31
SYMPK-211ENST00000598364 THOC2Q8NI27 1593 aaKnown RBP29.39■■■□□ 2.29
SYMPK-211ENST00000598364 BAZ1BQ9UIG0 1483 aaKnown RBP29.34■■■□□ 2.29
SYMPK-211ENST00000598364 BAZ1AQ9NRL2 1556 aaPredicted RBP29.26■■■□□ 2.28
SYMPK-211ENST00000598364 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.27
SYMPK-211ENST00000598364 LAMC3Q9Y6N6 1575 aa29.24■■■□□ 2.27
SYMPK-211ENST00000598364 KIF21AQ7Z4S6 1674 aa29.14■■■□□ 2.26
SYMPK-211ENST00000598364 PDS5BQ9NTI5 1447 aa29.1■■■□□ 2.25
SYMPK-211ENST00000598364 TRIM41Q8WV44 630 aa29.08■■■□□ 2.25
SYMPK-211ENST00000598364 MROH2BQ7Z745 1585 aa29.08■■■□□ 2.25
SYMPK-211ENST00000598364 CADPSQ9ULU8 1353 aa28.95■■■□□ 2.22
SYMPK-211ENST00000598364 MRC2Q9UBG0 1479 aa28.9■■■□□ 2.22
SYMPK-211ENST00000598364 WDR62O43379 1518 aa28.86■■■□□ 2.21
SYMPK-211ENST00000598364 WIZO95785 1651 aa28.66■■■□□ 2.18
SYMPK-211ENST00000598364 CEP164Q9UPV0 1460 aa28.65■■■□□ 2.18
SYMPK-211ENST00000598364 FANCD2Q9BXW9 1451 aa28.6■■■□□ 2.17
SYMPK-211ENST00000598364 OSCARQ8IYS5 282 aa28.59■■■□□ 2.17
SYMPK-211ENST00000598364 CFTRP13569 1480 aa28.51■■■□□ 2.15
SYMPK-211ENST00000598364 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
SYMPK-211ENST00000598364 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
SYMPK-211ENST00000598364 RIMBP3CA6NJZ7 1639 aa28.27■■■□□ 2.12
SYMPK-211ENST00000598364 RIMBP3BA6NNM3 1639 aa28.27■■■□□ 2.12
SYMPK-211ENST00000598364 RIMBP3Q9UFD9 1639 aa28.27■■■□□ 2.12
SYMPK-211ENST00000598364 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
SYMPK-211ENST00000598364 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
SYMPK-211ENST00000598364 ARHGEF11O15085 1522 aa28.14■■■□□ 2.1
SYMPK-211ENST00000598364 IFT140Q96RY7 1462 aa28.12■■■□□ 2.09
SYMPK-211ENST00000598364 PRDM2Q13029 1718 aa28.05■■■□□ 2.08
SYMPK-211ENST00000598364 TOPBP1Q92547 1522 aa28■■■□□ 2.07
SYMPK-211ENST00000598364 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
SYMPK-211ENST00000598364 CYB5RLQ6IPT4 315 aa27.97■■■□□ 2.07
SYMPK-211ENST00000598364 EIF4G3O43432 1585 aaKnown RBP27.94■■■□□ 2.06
SYMPK-211ENST00000598364 AQRO60306 1485 aaKnown RBP eCLIP27.85■■■□□ 2.058e-7■■■■■ 28.7
SYMPK-211ENST00000598364 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
SYMPK-211ENST00000598364 ABCC8Q09428 1581 aa27.85■■■□□ 2.05
SYMPK-211ENST00000598364 DNMBPQ6XZF7 1577 aa27.82■■■□□ 2.04
SYMPK-211ENST00000598364 TARBP1Q13395 1621 aaKnown RBP27.81■■■□□ 2.04
SYMPK-211ENST00000598364 CHD1O14646 1710 aa27.8■■■□□ 2.04
SYMPK-211ENST00000598364 TRHP20396 242 aaPredicted RBP27.78■■■□□ 2.04
SYMPK-211ENST00000598364 FBLN2P98095 1184 aa27.7■■■□□ 2.02
SYMPK-211ENST00000598364 POLA1P09884 1462 aaPredicted RBP27.7■■■□□ 2.02
SYMPK-211ENST00000598364 RAD54L2Q9Y4B4 1467 aa27.62■■■□□ 2.01
SYMPK-211ENST00000598364 TDRD9Q8NDG6 1382 aaKnown RBP27.59■■■□□ 2.01
SYMPK-211ENST00000598364 SOGA1O94964 1423 aa27.54■■■□□ 2
SYMPK-211ENST00000598364 CLASP1Q7Z460 1538 aa27.54■■■□□ 2
SYMPK-211ENST00000598364 SNAPC4Q5SXM2 1469 aa27.51■■■□□ 2
SYMPK-211ENST00000598364 CHMP7Q8WUX9 453 aaPredicted RBP27.43■■□□□ 1.98
SYMPK-211ENST00000598364 FGD5Q6ZNL6 1462 aa27.42■■□□□ 1.98
SYMPK-211ENST00000598364 WDR97A6NE52 1622 aa27.41■■□□□ 1.98
SYMPK-211ENST00000598364 SYNJ1O43426 1573 aa27.4■■□□□ 1.98
SYMPK-211ENST00000598364 MAGI1Q96QZ7 1491 aaPredicted RBP27.39■■□□□ 1.98
SYMPK-211ENST00000598364 GRIN2BQ13224 1484 aa27.35■■□□□ 1.97
SYMPK-211ENST00000598364 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
SYMPK-211ENST00000598364 CUX1P39880 1505 aa27.34■■□□□ 1.97
SYMPK-211ENST00000598364 SYNJ2O15056 1496 aa27.33■■□□□ 1.97
SYMPK-211ENST00000598364 GAPVD1Q14C86 1478 aa27.26■■□□□ 1.95
SYMPK-211ENST00000598364 PBRM1Q86U86 1689 aa27.15■■□□□ 1.94
SYMPK-211ENST00000598364 ERCC6L2Q5T890 1561 aa27.1■■□□□ 1.93
SYMPK-211ENST00000598364 ABCA10Q8WWZ4 1543 aa27.09■■□□□ 1.93
SYMPK-211ENST00000598364 ABCA5Q8WWZ7 1642 aa27.08■■□□□ 1.93
SYMPK-211ENST00000598364 GRIN2AQ12879 1464 aa27■■□□□ 1.91
SYMPK-211ENST00000598364 NUP160Q12769 1436 aa26.98■■□□□ 1.91
SYMPK-211ENST00000598364 CEP170Q5SW79 1584 aa26.97■■□□□ 1.91
SYMPK-211ENST00000598364 ADAMTS12P58397 1594 aa26.91■■□□□ 1.9
SYMPK-211ENST00000598364 SHROOM2Q13796 1616 aa26.89■■□□□ 1.9
SYMPK-211ENST00000598364 WRNQ14191 1432 aaPredicted RBP eCLIP26.84■■□□□ 1.89
SYMPK-211ENST00000598364 FHAD1B1AJZ9 1412 aa26.82■■□□□ 1.88
SYMPK-211ENST00000598364 KIF13AQ9H1H9 1805 aa26.81■■□□□ 1.88
SYMPK-211ENST00000598364 PRG4Q92954 1404 aaPredicted RBP26.73■■□□□ 1.87
SYMPK-211ENST00000598364 ERICH3Q5RHP9 1530 aa26.71■■□□□ 1.87
SYMPK-211ENST00000598364 TOP2BQ02880 1626 aa26.71■■□□□ 1.87
SYMPK-211ENST00000598364 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.86
SYMPK-211ENST00000598364 JPH4Q96JJ6 628 aa26.69■■□□□ 1.86
SYMPK-211ENST00000598364 ABCC10Q5T3U5 1492 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms