RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 NISCHQ9Y2I1 1504 aa23.25■■□□□ 1.31
DDX39B-202ENST00000396172 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
DDX39B-202ENST00000396172 ABCC9O60706 1549 aa19.58■□□□□ 0.73
DDX39B-202ENST00000396172 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
DDX39B-202ENST00000396172 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.68
DDX39B-202ENST00000396172 MYO15BQ96JP2 1530 aa19.26■□□□□ 0.67
DDX39B-202ENST00000396172 NACADO15069 1562 aa19.23■□□□□ 0.67
DDX39B-202ENST00000396172 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
DDX39B-202ENST00000396172 DCAF8L2P0C7V8 631 aa19.1■□□□□ 0.65
DDX39B-202ENST00000396172 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
DDX39B-202ENST00000396172 SCRIBQ14160 1630 aa18.76■□□□□ 0.59
DDX39B-202ENST00000396172 BICRAQ9NZM4 1560 aa18.5■□□□□ 0.55
DDX39B-202ENST00000396172 SHROOM4Q9ULL8 1493 aa18.49■□□□□ 0.55
DDX39B-202ENST00000396172 PABPN1Q86U42 306 aaKnown RBP eCLIP18.27■□□□□ 0.523e-19■■□□□ 11.8
DDX39B-202ENST00000396172 BAZ1AQ9NRL2 1556 aaPredicted RBP18.05■□□□□ 0.48
DDX39B-202ENST00000396172 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
DDX39B-202ENST00000396172 EIF4G1Q04637 1599 aaKnown RBP18■□□□□ 0.47
DDX39B-202ENST00000396172 CECR2Q9BXF3 1484 aa17.98■□□□□ 0.47
DDX39B-202ENST00000396172 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
DDX39B-202ENST00000396172 PEG3Q9GZU2 1588 aa17.84■□□□□ 0.45
DDX39B-202ENST00000396172 SMARCA2P51531 1590 aa17.82■□□□□ 0.44
DDX39B-202ENST00000396172 CC2D2AQ9P2K1 1620 aa17.82■□□□□ 0.44
DDX39B-202ENST00000396172 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
DDX39B-202ENST00000396172 WIZO95785 1651 aa17.78■□□□□ 0.44
DDX39B-202ENST00000396172 ATAD2BQ9ULI0 1458 aa17.72■□□□□ 0.43
DDX39B-202ENST00000396172 HMGXB3Q12766 1538 aa17.71■□□□□ 0.43
DDX39B-202ENST00000396172 NCAPD3P42695 1498 aa17.65■□□□□ 0.42
DDX39B-202ENST00000396172 BAZ1BQ9UIG0 1483 aaKnown RBP17.65■□□□□ 0.42
DDX39B-202ENST00000396172 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
DDX39B-202ENST00000396172 SUPT5HO00267 1087 aaKnown RBP17.59■□□□□ 0.41
DDX39B-202ENST00000396172 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
DDX39B-202ENST00000396172 CCDC88BA6NC98 1476 aa17.33■□□□□ 0.37
DDX39B-202ENST00000396172 PRDM2Q13029 1718 aa17.32■□□□□ 0.36
DDX39B-202ENST00000396172 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
DDX39B-202ENST00000396172 CFTRP13569 1480 aa17.16■□□□□ 0.34
DDX39B-202ENST00000396172 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
DDX39B-202ENST00000396172 NESP48681 1621 aa17.06■□□□□ 0.32
DDX39B-202ENST00000396172 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
DDX39B-202ENST00000396172 PDS5BQ9NTI5 1447 aa17.02■□□□□ 0.31
DDX39B-202ENST00000396172 FANCD2Q9BXW9 1451 aa16.98■□□□□ 0.31
DDX39B-202ENST00000396172 CEP164Q9UPV0 1460 aa16.96■□□□□ 0.31
DDX39B-202ENST00000396172 ERCC6Q03468 1493 aa16.91■□□□□ 0.3
DDX39B-202ENST00000396172 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
DDX39B-202ENST00000396172 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
DDX39B-202ENST00000396172 DNMBPQ6XZF7 1577 aa16.84■□□□□ 0.29
DDX39B-202ENST00000396172 THOC2Q8NI27 1593 aaKnown RBP16.84■□□□□ 0.29
DDX39B-202ENST00000396172 MRC2Q9UBG0 1479 aa16.84■□□□□ 0.29
DDX39B-202ENST00000396172 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
DDX39B-202ENST00000396172 TOP2BQ02880 1626 aa16.82■□□□□ 0.28
DDX39B-202ENST00000396172 SYNJ1O43426 1573 aa16.79■□□□□ 0.28
DDX39B-202ENST00000396172 WDR62O43379 1518 aa16.79■□□□□ 0.28
DDX39B-202ENST00000396172 CUX1P39880 1505 aa16.78■□□□□ 0.28
DDX39B-202ENST00000396172 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
DDX39B-202ENST00000396172 TOPBP1Q92547 1522 aa16.76■□□□□ 0.27
DDX39B-202ENST00000396172 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
DDX39B-202ENST00000396172 FGD5Q6ZNL6 1462 aa16.66■□□□□ 0.26
DDX39B-202ENST00000396172 TRIM41Q8WV44 630 aa16.64■□□□□ 0.25
DDX39B-202ENST00000396172 POLA1P09884 1462 aaPredicted RBP16.64■□□□□ 0.25
DDX39B-202ENST00000396172 WDR97A6NE52 1622 aa16.64■□□□□ 0.25
DDX39B-202ENST00000396172 CUX2O14529 1486 aa16.62■□□□□ 0.25
DDX39B-202ENST00000396172 TARBP1Q13395 1621 aaKnown RBP16.59■□□□□ 0.25
DDX39B-202ENST00000396172 IFT140Q96RY7 1462 aa16.57■□□□□ 0.24
DDX39B-202ENST00000396172 SOGA1O94964 1423 aa16.54■□□□□ 0.24
DDX39B-202ENST00000396172 ABCA10Q8WWZ4 1543 aa16.54■□□□□ 0.24
DDX39B-202ENST00000396172 RAD54L2Q9Y4B4 1467 aa16.5■□□□□ 0.23
DDX39B-202ENST00000396172 ABCA5Q8WWZ7 1642 aa16.5■□□□□ 0.23
DDX39B-202ENST00000396172 PBRM1Q86U86 1689 aa16.49■□□□□ 0.23
DDX39B-202ENST00000396172 EEA1Q15075 1411 aa16.47■□□□□ 0.23
DDX39B-202ENST00000396172 EIF4G3O43432 1585 aaKnown RBP16.47■□□□□ 0.23
DDX39B-202ENST00000396172 KIF27Q86VH2 1401 aa16.45■□□□□ 0.22
DDX39B-202ENST00000396172 CUL7Q14999 1698 aa16.4■□□□□ 0.22
DDX39B-202ENST00000396172 GAPVD1Q14C86 1478 aa16.4■□□□□ 0.22
DDX39B-202ENST00000396172 ERICH3Q5RHP9 1530 aa16.39■□□□□ 0.21
DDX39B-202ENST00000396172 ZNF608Q9ULD9 1512 aaPredicted RBP16.38■□□□□ 0.21
DDX39B-202ENST00000396172 GRIN2BQ13224 1484 aa16.35■□□□□ 0.21
DDX39B-202ENST00000396172 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
DDX39B-202ENST00000396172 RUSC2Q8N2Y8 1516 aa16.33■□□□□ 0.2
DDX39B-202ENST00000396172 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.27e-8■■■■□ 25.3
DDX39B-202ENST00000396172 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
DDX39B-202ENST00000396172 KIF21BO75037 1637 aa16.3■□□□□ 0.2
DDX39B-202ENST00000396172 MAGI1Q96QZ7 1491 aaPredicted RBP16.3■□□□□ 0.2
DDX39B-202ENST00000396172 SNAPC4Q5SXM2 1469 aa16.25■□□□□ 0.19
DDX39B-202ENST00000396172 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
DDX39B-202ENST00000396172 IGF1RP08069 1367 aa16.24■□□□□ 0.19
DDX39B-202ENST00000396172 CHD1O14646 1710 aa16.23■□□□□ 0.19
DDX39B-202ENST00000396172 FAM9AQ8IZU1 332 aaPredicted RBP16.22■□□□□ 0.19
DDX39B-202ENST00000396172 FHAD1B1AJZ9 1412 aa16.22■□□□□ 0.19
DDX39B-202ENST00000396172 PRXQ9BXM0 1461 aa16.22■□□□□ 0.19
DDX39B-202ENST00000396172 SYNJ2O15056 1496 aa16.2■□□□□ 0.18
DDX39B-202ENST00000396172 RAPGEF2Q9Y4G8 1499 aa16.2■□□□□ 0.18
DDX39B-202ENST00000396172 CARMIL1Q5VZK9 1371 aa16.2■□□□□ 0.18
DDX39B-202ENST00000396172 CTTNBP2Q8WZ74 1663 aa16.2■□□□□ 0.18
DDX39B-202ENST00000396172 GOLGA3Q08378 1498 aa16.18■□□□□ 0.18
DDX39B-202ENST00000396172 GRIN2AQ12879 1464 aa16.15■□□□□ 0.18
DDX39B-202ENST00000396172 CHMP7Q8WUX9 453 aaPredicted RBP16.08■□□□□ 0.16
DDX39B-202ENST00000396172 CEP170Q5SW79 1584 aa16.05■□□□□ 0.16
DDX39B-202ENST00000396172 NUP160Q12769 1436 aa16.04■□□□□ 0.16
DDX39B-202ENST00000396172 IQGAP2Q13576 1575 aa16.03■□□□□ 0.16
DDX39B-202ENST00000396172 FBLN2P98095 1184 aa16.03■□□□□ 0.16
DDX39B-202ENST00000396172 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms