RNA–Protein interactions for RNA: ENST00000585606.5

GIPC1-204, Transcript of GIPC PDZ domain containing family member 1, humanhuman

TSL 2

Gene GIPC1, Length 2,071 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-204ENST00000585606 NISCHQ9Y2I1 1504 aa42.27■■■■■ 4.36
GIPC1-204ENST00000585606 CCDC180Q9P1Z9 1646 aa36.42■■■■□ 3.42
GIPC1-204ENST00000585606 ZCCHC6Q5VYS8 1495 aaKnown RBP35.62■■■■□ 3.29
GIPC1-204ENST00000585606 SHROOM4Q9ULL8 1493 aa35.04■■■■□ 3.2
GIPC1-204ENST00000585606 DCAF1Q9Y4B6 1507 aa34.91■■■■□ 3.18
GIPC1-204ENST00000585606 DCAF8L2P0C7V8 631 aa34.81■■■■□ 3.16
GIPC1-204ENST00000585606 MYO15BQ96JP2 1530 aa34.22■■■■□ 3.07
GIPC1-204ENST00000585606 SUPT5HO00267 1087 aaKnown RBP34.08■■■■□ 3.05
GIPC1-204ENST00000585606 ABCC9O60706 1549 aa33.99■■■■□ 3.03
GIPC1-204ENST00000585606 NACADO15069 1562 aa33.82■■■■□ 3.01
GIPC1-204ENST00000585606 SCRIBQ14160 1630 aa33.68■■■□□ 2.98
GIPC1-204ENST00000585606 RB1CC1Q8TDY2 1594 aa33.35■■■□□ 2.93
GIPC1-204ENST00000585606 RSF1Q96T23 1441 aaPredicted RBP33.11■■■□□ 2.89
GIPC1-204ENST00000585606 CHIC1Q5VXU3 224 aa33.01■■■□□ 2.88
GIPC1-204ENST00000585606 CECR2Q9BXF3 1484 aa32.88■■■□□ 2.85
GIPC1-204ENST00000585606 UNC13AQ9UPW8 1703 aa32.75■■■□□ 2.83
GIPC1-204ENST00000585606 MROH2BQ7Z745 1585 aa32.73■■■□□ 2.83
GIPC1-204ENST00000585606 BAZ1AQ9NRL2 1556 aaPredicted RBP32.53■■■□□ 2.8
GIPC1-204ENST00000585606 WIZO95785 1651 aa32.47■■■□□ 2.79
GIPC1-204ENST00000585606 BICRAQ9NZM4 1560 aa32.44■■■□□ 2.78
GIPC1-204ENST00000585606 SMARCA4P51532 1647 aa32.32■■■□□ 2.76
GIPC1-204ENST00000585606 PABPN1Q86U42 306 aaKnown RBP eCLIP32.28■■■□□ 2.76
GIPC1-204ENST00000585606 TOP2AP11388 1531 aaKnown RBP32.09■■■□□ 2.73
GIPC1-204ENST00000585606 TRIM41Q8WV44 630 aa31.96■■■□□ 2.71
GIPC1-204ENST00000585606 PEG3Q9GZU2 1588 aa31.89■■■□□ 2.7
GIPC1-204ENST00000585606 CCDC88BA6NC98 1476 aa31.87■■■□□ 2.69
GIPC1-204ENST00000585606 SMARCA2P51531 1590 aa31.85■■■□□ 2.69
GIPC1-204ENST00000585606 EIF4G1Q04637 1599 aaKnown RBP31.85■■■□□ 2.69
GIPC1-204ENST00000585606 LOC105371045A0A1W2PR82 267 aa31.84■■■□□ 2.69
GIPC1-204ENST00000585606 ATAD2BQ9ULI0 1458 aa31.68■■■□□ 2.66
GIPC1-204ENST00000585606 BAZ1BQ9UIG0 1483 aaKnown RBP31.48■■■□□ 2.63
GIPC1-204ENST00000585606 FAM9AQ8IZU1 332 aaPredicted RBP31.44■■■□□ 2.62
GIPC1-204ENST00000585606 ABCC8Q09428 1581 aa31.39■■■□□ 2.62
GIPC1-204ENST00000585606 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
GIPC1-204ENST00000585606 HMGXB3Q12766 1538 aa31.21■■■□□ 2.59
GIPC1-204ENST00000585606 WRNQ14191 1432 aaPredicted RBP eCLIP31.09■■■□□ 2.57
GIPC1-204ENST00000585606 PCGF6Q9BYE7 350 aa31.02■■■□□ 2.56
GIPC1-204ENST00000585606 SOGA1O94964 1423 aa31■■■□□ 2.55
GIPC1-204ENST00000585606 EHMT2Q96KQ7 1210 aa30.99■■■□□ 2.55
GIPC1-204ENST00000585606 EEA1Q15075 1411 aa30.96■■■□□ 2.55
GIPC1-204ENST00000585606 SYNJ1O43426 1573 aa30.93■■■□□ 2.54
GIPC1-204ENST00000585606 RUSC2Q8N2Y8 1516 aa30.88■■■□□ 2.53
GIPC1-204ENST00000585606 CSRNP3Q8WYN3 585 aa30.86■■■□□ 2.53
GIPC1-204ENST00000585606 TRIM26Q12899 539 aaPredicted RBP30.82■■■□□ 2.52
GIPC1-204ENST00000585606 CFTRP13569 1480 aa30.77■■■□□ 2.52
GIPC1-204ENST00000585606 CC2D2AQ9P2K1 1620 aa30.73■■■□□ 2.51
GIPC1-204ENST00000585606 TOP2BQ02880 1626 aa30.73■■■□□ 2.51
GIPC1-204ENST00000585606 TNIKQ9UKE5 1360 aa30.68■■■□□ 2.5
GIPC1-204ENST00000585606 HRCP23327 699 aa30.67■■■□□ 2.5
GIPC1-204ENST00000585606 BIVM-ERCC5R4GMW8 1640 aa30.67■■■□□ 2.5
GIPC1-204ENST00000585606 GOLGA3Q08378 1498 aa30.58■■■□□ 2.49
GIPC1-204ENST00000585606 CADPSQ9ULU8 1353 aa30.55■■■□□ 2.48
GIPC1-204ENST00000585606 CUX1P39880 1505 aa30.54■■■□□ 2.48
GIPC1-204ENST00000585606 CEP162Q5TB80 1403 aa30.53■■■□□ 2.48
GIPC1-204ENST00000585606 PRDM2Q13029 1718 aa30.52■■■□□ 2.48
GIPC1-204ENST00000585606 KIF21BO75037 1637 aa30.52■■■□□ 2.48
GIPC1-204ENST00000585606 CEP164Q9UPV0 1460 aa30.51■■■□□ 2.48
GIPC1-204ENST00000585606 UBTFP17480 764 aaKnown RBP30.5■■■□□ 2.47
GIPC1-204ENST00000585606 RAPGEF2Q9Y4G8 1499 aa30.3■■■□□ 2.44
GIPC1-204ENST00000585606 PPARGC1BQ86YN6 1023 aaKnown RBP30.25■■■□□ 2.43
GIPC1-204ENST00000585606 PRXQ9BXM0 1461 aa30.24■■■□□ 2.43
GIPC1-204ENST00000585606 KIF27Q86VH2 1401 aa30.24■■■□□ 2.43
GIPC1-204ENST00000585606 ERICH3Q5RHP9 1530 aa30.19■■■□□ 2.42
GIPC1-204ENST00000585606 FANCD2Q9BXW9 1451 aa30.18■■■□□ 2.42
GIPC1-204ENST00000585606 CLIP1P30622 1438 aa30.14■■■□□ 2.42
GIPC1-204ENST00000585606 NESP48681 1621 aa30.09■■■□□ 2.41
GIPC1-204ENST00000585606 FGD5Q6ZNL6 1462 aa30.08■■■□□ 2.41
GIPC1-204ENST00000585606 LAMC3Q9Y6N6 1575 aa30.03■■■□□ 2.4
GIPC1-204ENST00000585606 CUX2O14529 1486 aa30.02■■■□□ 2.4
GIPC1-204ENST00000585606 IGF1RP08069 1367 aa30■■■□□ 2.39
GIPC1-204ENST00000585606 DNMBPQ6XZF7 1577 aa29.98■■■□□ 2.39
GIPC1-204ENST00000585606 DNAJC5BQ9UF47 199 aa29.97■■■□□ 2.39
GIPC1-204ENST00000585606 VPS8Q8N3P4 1428 aa29.97■■■□□ 2.39
GIPC1-204ENST00000585606 TOPBP1Q92547 1522 aa29.93■■■□□ 2.38
GIPC1-204ENST00000585606 ZEB1P37275 1124 aaPredicted RBP29.9■■■□□ 2.38
GIPC1-204ENST00000585606 POLA1P09884 1462 aaPredicted RBP29.84■■■□□ 2.37
GIPC1-204ENST00000585606 RANGAP1P46060 587 aaPredicted RBP29.83■■■□□ 2.37
GIPC1-204ENST00000585606 ABCA10Q8WWZ4 1543 aa29.82■■■□□ 2.36
GIPC1-204ENST00000585606 CARMIL1Q5VZK9 1371 aa29.82■■■□□ 2.36
GIPC1-204ENST00000585606 PDS5BQ9NTI5 1447 aa29.82■■■□□ 2.36
GIPC1-204ENST00000585606 TTBK1Q5TCY1 1321 aaPredicted RBP29.81■■■□□ 2.36
GIPC1-204ENST00000585606 RAD54L2Q9Y4B4 1467 aa29.8■■■□□ 2.36
GIPC1-204ENST00000585606 URB2Q14146 1524 aaKnown RBP29.79■■■□□ 2.36
GIPC1-204ENST00000585606 ARAP1Q96P48 1450 aa29.78■■■□□ 2.36
GIPC1-204ENST00000585606 APLP2Q06481 763 aa29.69■■■□□ 2.34
GIPC1-204ENST00000585606 ARHGAP35Q9NRY4 1499 aa29.66■■■□□ 2.34
GIPC1-204ENST00000585606 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
GIPC1-204ENST00000585606 WDR97A6NE52 1622 aa29.6■■■□□ 2.33
GIPC1-204ENST00000585606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.55■■■□□ 2.32
GIPC1-204ENST00000585606 CUL7Q14999 1698 aa29.53■■■□□ 2.32
GIPC1-204ENST00000585606 ABCA5Q8WWZ7 1642 aa29.49■■■□□ 2.31
GIPC1-204ENST00000585606 TDRD9Q8NDG6 1382 aaKnown RBP29.47■■■□□ 2.31
GIPC1-204ENST00000585606 CCER1Q8TC90 406 aaPredicted RBP29.46■■■□□ 2.31
GIPC1-204ENST00000585606 GAPVD1Q14C86 1478 aa29.44■■■□□ 2.3
GIPC1-204ENST00000585606 KANK4Q5T7N3 995 aaPredicted RBP29.43■■■□□ 2.3
GIPC1-204ENST00000585606 TARBP1Q13395 1621 aaKnown RBP29.42■■■□□ 2.3
GIPC1-204ENST00000585606 MRC2Q9UBG0 1479 aa29.39■■■□□ 2.3
GIPC1-204ENST00000585606 MAP3K1Q13233 1512 aa29.32■■■□□ 2.28
GIPC1-204ENST00000585606 HNRNPUL2Q1KMD3 747 aaKnown RBP29.3■■■□□ 2.28
GIPC1-204ENST00000585606 CTTNBP2Q8WZ74 1663 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms