RNA–Protein interactions for RNA: ENST00000598155.5

SYMPK-209, Transcript of symplekin, humanhuman

TSL 5

Gene SYMPK, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-209ENST00000598155 NISCHQ9Y2I1 1504 aa49.74■■■■■ 5.55
SYMPK-209ENST00000598155 CCDC180Q9P1Z9 1646 aa44.5■■■■■ 4.71
SYMPK-209ENST00000598155 ABCC9O60706 1549 aa44.13■■■■■ 4.65
SYMPK-209ENST00000598155 RB1CC1Q8TDY2 1594 aa42.21■■■■■ 4.35
SYMPK-209ENST00000598155 NACADO15069 1562 aa42.01■■■■■ 4.32
SYMPK-209ENST00000598155 DCAF8L2P0C7V8 631 aa41.75■■■■■ 4.27
SYMPK-209ENST00000598155 MYO15BQ96JP2 1530 aa41.59■■■■■ 4.25
SYMPK-209ENST00000598155 ZCCHC6Q5VYS8 1495 aaKnown RBP41.32■■■■■ 4.2
SYMPK-209ENST00000598155 DCAF1Q9Y4B6 1507 aa41.16■■■■■ 4.18
SYMPK-209ENST00000598155 UNC13AQ9UPW8 1703 aa41.13■■■■■ 4.17
SYMPK-209ENST00000598155 PABPN1Q86U42 306 aaKnown RBP eCLIP41.11■■■■■ 4.171e-6■■■□□ 15.6
SYMPK-209ENST00000598155 DNAJC5BQ9UF47 199 aa41.05■■■■■ 4.16
SYMPK-209ENST00000598155 BICRAQ9NZM4 1560 aa40.92■■■■■ 4.14
SYMPK-209ENST00000598155 SHROOM4Q9ULL8 1493 aa40.54■■■■■ 4.08
SYMPK-209ENST00000598155 SCRIBQ14160 1630 aa40.52■■■■■ 4.08
SYMPK-209ENST00000598155 EIF4G1Q04637 1599 aaKnown RBP39.91■■■■□ 3.98
SYMPK-209ENST00000598155 CC2D2AQ9P2K1 1620 aa39.89■■■■□ 3.98
SYMPK-209ENST00000598155 CECR2Q9BXF3 1484 aa39.75■■■■□ 3.95
SYMPK-209ENST00000598155 NCAPD3P42695 1498 aa38.78■■■■□ 3.8
SYMPK-209ENST00000598155 SMARCA4P51532 1647 aa38.72■■■■□ 3.79
SYMPK-209ENST00000598155 ATAD2BQ9ULI0 1458 aa38.69■■■■□ 3.78
SYMPK-209ENST00000598155 SMARCA2P51531 1590 aa38.63■■■■□ 3.77
SYMPK-209ENST00000598155 BAZ1AQ9NRL2 1556 aaPredicted RBP38.61■■■■□ 3.77
SYMPK-209ENST00000598155 HMGXB3Q12766 1538 aa38.53■■■■□ 3.76
SYMPK-209ENST00000598155 PEG3Q9GZU2 1588 aa38.38■■■■□ 3.73
SYMPK-209ENST00000598155 BAZ1BQ9UIG0 1483 aaKnown RBP38.34■■■■□ 3.73
SYMPK-209ENST00000598155 MROH2BQ7Z745 1585 aa38.3■■■■□ 3.72
SYMPK-209ENST00000598155 ERCC6Q03468 1493 aa38.12■■■■□ 3.69
SYMPK-209ENST00000598155 NESP48681 1621 aa37.99■■■■□ 3.67
SYMPK-209ENST00000598155 CUX2O14529 1486 aa37.98■■■■□ 3.67
SYMPK-209ENST00000598155 LAMC3Q9Y6N6 1575 aa37.84■■■■□ 3.65
SYMPK-209ENST00000598155 WIZO95785 1651 aa37.82■■■■□ 3.64
SYMPK-209ENST00000598155 RSF1Q96T23 1441 aaPredicted RBP37.65■■■■□ 3.62
SYMPK-209ENST00000598155 PDS5BQ9NTI5 1447 aa37.63■■■■□ 3.61
SYMPK-209ENST00000598155 CADPSQ9ULU8 1353 aa37.61■■■■□ 3.61
SYMPK-209ENST00000598155 THOC2Q8NI27 1593 aaKnown RBP37.58■■■■□ 3.61
SYMPK-209ENST00000598155 DNAJC5Q9H3Z4 198 aa37.52■■■■□ 3.6
SYMPK-209ENST00000598155 KIF21AQ7Z4S6 1674 aa37.5■■■■□ 3.59
SYMPK-209ENST00000598155 TOP2AP11388 1531 aaKnown RBP37.45■■■■□ 3.59
SYMPK-209ENST00000598155 MRC2Q9UBG0 1479 aa37.28■■■■□ 3.56
SYMPK-209ENST00000598155 CFTRP13569 1480 aa37.26■■■■□ 3.55
SYMPK-209ENST00000598155 CEP164Q9UPV0 1460 aa37.2■■■■□ 3.55
SYMPK-209ENST00000598155 WDR62O43379 1518 aa37.17■■■■□ 3.54
SYMPK-209ENST00000598155 FANCD2Q9BXW9 1451 aa37.17■■■■□ 3.54
SYMPK-209ENST00000598155 CCDC88BA6NC98 1476 aa36.98■■■■□ 3.51
SYMPK-209ENST00000598155 PRDM2Q13029 1718 aa36.84■■■■□ 3.49
SYMPK-209ENST00000598155 URB2Q14146 1524 aaKnown RBP36.83■■■■□ 3.49
SYMPK-209ENST00000598155 TOPBP1Q92547 1522 aa36.5■■■■□ 3.43
SYMPK-209ENST00000598155 ABCC8Q09428 1581 aa36.49■■■■□ 3.43
SYMPK-209ENST00000598155 IFT140Q96RY7 1462 aa36.45■■■■□ 3.43
SYMPK-209ENST00000598155 DNMBPQ6XZF7 1577 aa36.41■■■■□ 3.42
SYMPK-209ENST00000598155 ZNF608Q9ULD9 1512 aaPredicted RBP36.3■■■■□ 3.4
SYMPK-209ENST00000598155 OSCARQ8IYS5 282 aa36.25■■■■□ 3.39
SYMPK-209ENST00000598155 SUPT5HO00267 1087 aaKnown RBP36.17■■■■□ 3.38
SYMPK-209ENST00000598155 POLA1P09884 1462 aaPredicted RBP36.15■■■■□ 3.38
SYMPK-209ENST00000598155 EIF4G3O43432 1585 aaKnown RBP36.13■■■■□ 3.38
SYMPK-209ENST00000598155 TARBP1Q13395 1621 aaKnown RBP36.13■■■■□ 3.37
SYMPK-209ENST00000598155 AQRO60306 1485 aaKnown RBP eCLIP36.01■■■■□ 3.357e-7■■■■□ 24.9
SYMPK-209ENST00000598155 SOGA1O94964 1423 aa35.99■■■■□ 3.35
SYMPK-209ENST00000598155 TRIM41Q8WV44 630 aa35.97■■■■□ 3.35
SYMPK-209ENST00000598155 CUX1P39880 1505 aa35.97■■■■□ 3.35
SYMPK-209ENST00000598155 RAD54L2Q9Y4B4 1467 aa35.97■■■■□ 3.35
SYMPK-209ENST00000598155 FGD5Q6ZNL6 1462 aa35.97■■■■□ 3.35
SYMPK-209ENST00000598155 WDR97A6NE52 1622 aa35.87■■■■□ 3.33
SYMPK-209ENST00000598155 TDRD9Q8NDG6 1382 aaKnown RBP35.85■■■■□ 3.33
SYMPK-209ENST00000598155 CHD1O14646 1710 aa35.75■■■■□ 3.31
SYMPK-209ENST00000598155 RIMBP3CA6NJZ7 1639 aa35.71■■■■□ 3.31
SYMPK-209ENST00000598155 RIMBP3BA6NNM3 1639 aa35.71■■■■□ 3.31
SYMPK-209ENST00000598155 RIMBP3Q9UFD9 1639 aa35.71■■■■□ 3.31
SYMPK-209ENST00000598155 FBLN2P98095 1184 aa35.69■■■■□ 3.3
SYMPK-209ENST00000598155 SNAPC4Q5SXM2 1469 aa35.69■■■■□ 3.3
SYMPK-209ENST00000598155 ARHGEF11O15085 1522 aa35.67■■■■□ 3.3
SYMPK-209ENST00000598155 GRIN2BQ13224 1484 aa35.67■■■■□ 3.3
SYMPK-209ENST00000598155 MAGI1Q96QZ7 1491 aaPredicted RBP35.64■■■■□ 3.3
SYMPK-209ENST00000598155 ABCA10Q8WWZ4 1543 aa35.6■■■■□ 3.29
SYMPK-209ENST00000598155 GAPVD1Q14C86 1478 aa35.56■■■■□ 3.28
SYMPK-209ENST00000598155 WRNQ14191 1432 aaPredicted RBP eCLIP35.53■■■■□ 3.28
SYMPK-209ENST00000598155 CHMP7Q8WUX9 453 aaPredicted RBP35.53■■■■□ 3.28
SYMPK-209ENST00000598155 SYNJ2O15056 1496 aa35.51■■■■□ 3.28
SYMPK-209ENST00000598155 TOP2BQ02880 1626 aa35.5■■■■□ 3.27
SYMPK-209ENST00000598155 ABCA5Q8WWZ7 1642 aa35.5■■■■□ 3.27
SYMPK-209ENST00000598155 BIVM-ERCC5R4GMW8 1640 aa35.5■■■■□ 3.27
SYMPK-209ENST00000598155 PBRM1Q86U86 1689 aa35.48■■■■□ 3.27
SYMPK-209ENST00000598155 SYNJ1O43426 1573 aa35.44■■■■□ 3.26
SYMPK-209ENST00000598155 CLASP1Q7Z460 1538 aa35.42■■■■□ 3.26
SYMPK-209ENST00000598155 ARAP1Q96P48 1450 aa35.34■■■■□ 3.25
SYMPK-209ENST00000598155 CYB5RLQ6IPT4 315 aa35.34■■■■□ 3.25
SYMPK-209ENST00000598155 ADAMTS12P58397 1594 aa35.22■■■■□ 3.23
SYMPK-209ENST00000598155 GRIN2AQ12879 1464 aa35.19■■■■□ 3.22
SYMPK-209ENST00000598155 ERICH3Q5RHP9 1530 aa35.17■■■■□ 3.22
SYMPK-209ENST00000598155 FHAD1B1AJZ9 1412 aa35.15■■■■□ 3.22
SYMPK-209ENST00000598155 NUP160Q12769 1436 aa35.08■■■■□ 3.21
SYMPK-209ENST00000598155 CEP170Q5SW79 1584 aa35.02■■■■□ 3.2
SYMPK-209ENST00000598155 SHROOM2Q13796 1616 aa34.86■■■■□ 3.17
SYMPK-209ENST00000598155 TRHP20396 242 aaPredicted RBP34.85■■■■□ 3.17
SYMPK-209ENST00000598155 KIF27Q86VH2 1401 aa34.85■■■■□ 3.17
SYMPK-209ENST00000598155 ERCC6L2Q5T890 1561 aa34.83■■■■□ 3.17
SYMPK-209ENST00000598155 IGF1RP08069 1367 aa34.76■■■■□ 3.16
SYMPK-209ENST00000598155 RUSC2Q8N2Y8 1516 aa34.71■■■■□ 3.15
SYMPK-209ENST00000598155 CUL7Q14999 1698 aa34.71■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms