Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBR4Q5T4S7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBR4Q5T4S7 UNC93B8-201ENST00000511903 705 ntBASIC14.21□□□□□ -0.13
UBR4Q5T4S7 MED25-210ENST00000612854 801 ntTSL 5 BASIC14.21□□□□□ -0.13
UBR4Q5T4S7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBR4Q5T4S7 MED25-214ENST00000622402 642 ntTSL 5 BASIC14.21□□□□□ -0.13
UBR4Q5T4S7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBR4Q5T4S7 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.21□□□□□ -0.14
UBR4Q5T4S7 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBR4Q5T4S7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC14.2□□□□□ -0.14
UBR4Q5T4S7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBR4Q5T4S7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 MIR4787-201ENST00000607364 84 ntBASIC14.18□□□□□ -0.14
UBR4Q5T4S7 RARRES2P11-201ENST00000635158 484 ntBASIC14.18□□□□□ -0.14
UBR4Q5T4S7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
UBR4Q5T4S7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.17□□□□□ -0.14
UBR4Q5T4S7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
UBR4Q5T4S7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.16□□□□□ -0.14
UBR4Q5T4S7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
UBR4Q5T4S7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
UBR4Q5T4S7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC14.15□□□□□ -0.14
UBR4Q5T4S7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.14□□□□□ -0.15
UBR4Q5T4S7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 MIR219A2-201ENST00000608502 1504 ntBASIC14.13□□□□□ -0.15
UBR4Q5T4S7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC14.13□□□□□ -0.15
UBR4Q5T4S7 MIR6821-201ENST00000617625 74 ntBASIC14.13□□□□□ -0.15
UBR4Q5T4S7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 AC087623.3-201ENST00000607047 1098 ntBASIC14.12□□□□□ -0.15
UBR4Q5T4S7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
UBR4Q5T4S7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 REST-210ENST00000638187 1334 ntTSL 5 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 RAP2CP1-202ENST00000605179 643 ntBASIC14.11□□□□□ -0.15
UBR4Q5T4S7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC14.11□□□□□ -0.15
UBR4Q5T4S7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
UBR4Q5T4S7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC14.1□□□□□ -0.15
UBR4Q5T4S7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC14.1□□□□□ -0.15
UBR4Q5T4S7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC14.1□□□□□ -0.15
UBR4Q5T4S7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms