RNA–Protein interactions for RNA: ENST00000378887.3

SDHAF1-201, Transcript of succinate dehydrogenase complex assembly factor 1, humanhuman

APPRIS P1 BASIC

Gene SDHAF1, Length 1,117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF1-201ENST00000378887 NISCHQ9Y2I1 1504 aa58.47■■■■■ 6.95
SDHAF1-201ENST00000378887 CCDC180Q9P1Z9 1646 aa52.02■■■■■ 5.92
SDHAF1-201ENST00000378887 ABCC9O60706 1549 aa50.83■■■■■ 5.73
SDHAF1-201ENST00000378887 RB1CC1Q8TDY2 1594 aa48.86■■■■■ 5.41
SDHAF1-201ENST00000378887 NACADO15069 1562 aa48.85■■■■■ 5.41
SDHAF1-201ENST00000378887 ZCCHC6Q5VYS8 1495 aaKnown RBP48.75■■■■■ 5.4
SDHAF1-201ENST00000378887 MYO15BQ96JP2 1530 aa48.67■■■■■ 5.38
SDHAF1-201ENST00000378887 DCAF1Q9Y4B6 1507 aa48.43■■■■■ 5.34
SDHAF1-201ENST00000378887 DCAF8L2P0C7V8 631 aa48.36■■■■■ 5.33
SDHAF1-201ENST00000378887 UNC13AQ9UPW8 1703 aa48.01■■■■■ 5.28
SDHAF1-201ENST00000378887 BICRAQ9NZM4 1560 aa47.68■■■■■ 5.22
SDHAF1-201ENST00000378887 PABPN1Q86U42 306 aaKnown RBP eCLIP47.42■■■■■ 5.18
SDHAF1-201ENST00000378887 SCRIBQ14160 1630 aa47.38■■■■■ 5.17
SDHAF1-201ENST00000378887 SHROOM4Q9ULL8 1493 aa46.99■■■■■ 5.11
SDHAF1-201ENST00000378887 DNAJC5BQ9UF47 199 aa46.91■■■■■ 5.1
SDHAF1-201ENST00000378887 EIF4G1Q04637 1599 aaKnown RBP46.26■■■■■ 5
SDHAF1-201ENST00000378887 CC2D2AQ9P2K1 1620 aa46.07■■■■■ 4.97
SDHAF1-201ENST00000378887 CECR2Q9BXF3 1484 aa45.68■■■■■ 4.9
SDHAF1-201ENST00000378887 SMARCA4P51532 1647 aa45.39■■■■■ 4.86
SDHAF1-201ENST00000378887 BAZ1AQ9NRL2 1556 aaPredicted RBP45.23■■■■■ 4.83
SDHAF1-201ENST00000378887 ATAD2BQ9ULI0 1458 aa45.15■■■■■ 4.82
SDHAF1-201ENST00000378887 NCAPD3P42695 1498 aa45.14■■■■■ 4.82
SDHAF1-201ENST00000378887 MROH2BQ7Z745 1585 aa45.1■■■■■ 4.81
SDHAF1-201ENST00000378887 PEG3Q9GZU2 1588 aa45.05■■■■■ 4.8
SDHAF1-201ENST00000378887 SMARCA2P51531 1590 aa44.99■■■■■ 4.79
SDHAF1-201ENST00000378887 HMGXB3Q12766 1538 aa44.92■■■■■ 4.78
SDHAF1-201ENST00000378887 BAZ1BQ9UIG0 1483 aaKnown RBP44.63■■■■■ 4.73
SDHAF1-201ENST00000378887 WIZO95785 1651 aa44.58■■■■■ 4.73
SDHAF1-201ENST00000378887 RSF1Q96T23 1441 aaPredicted RBP44.52■■■■■ 4.72
SDHAF1-201ENST00000378887 NESP48681 1621 aa44.09■■■■■ 4.65
SDHAF1-201ENST00000378887 TOP2AP11388 1531 aaKnown RBP44.07■■■■■ 4.65
SDHAF1-201ENST00000378887 LAMC3Q9Y6N6 1575 aa43.89■■■■■ 4.62
SDHAF1-201ENST00000378887 CADPSQ9ULU8 1353 aa43.72■■■■■ 4.59
SDHAF1-201ENST00000378887 ERCC6Q03468 1493 aa43.64■■■■■ 4.58
SDHAF1-201ENST00000378887 KIF21AQ7Z4S6 1674 aa43.57■■■■■ 4.57
SDHAF1-201ENST00000378887 CCDC88BA6NC98 1476 aa43.55■■■■■ 4.56
SDHAF1-201ENST00000378887 CFTRP13569 1480 aa43.55■■■■■ 4.56
SDHAF1-201ENST00000378887 THOC2Q8NI27 1593 aaKnown RBP43.52■■■■■ 4.56
SDHAF1-201ENST00000378887 PDS5BQ9NTI5 1447 aa43.46■■■■■ 4.55
SDHAF1-201ENST00000378887 CUX2O14529 1486 aa43.4■■■■■ 4.54
SDHAF1-201ENST00000378887 FANCD2Q9BXW9 1451 aa43.22■■■■■ 4.51
SDHAF1-201ENST00000378887 PRDM2Q13029 1718 aa43.22■■■■■ 4.51
SDHAF1-201ENST00000378887 MRC2Q9UBG0 1479 aa43.13■■■■■ 4.5
SDHAF1-201ENST00000378887 CEP164Q9UPV0 1460 aa43.13■■■■■ 4.49
SDHAF1-201ENST00000378887 WDR62O43379 1518 aa43.11■■■■■ 4.49
SDHAF1-201ENST00000378887 SUPT5HO00267 1087 aaKnown RBP42.96■■■■■ 4.47
SDHAF1-201ENST00000378887 URB2Q14146 1524 aaKnown RBP42.92■■■■■ 4.46
SDHAF1-201ENST00000378887 TOPBP1Q92547 1522 aa42.59■■■■■ 4.41
SDHAF1-201ENST00000378887 DNMBPQ6XZF7 1577 aa42.52■■■■■ 4.4
SDHAF1-201ENST00000378887 ABCC8Q09428 1581 aa42.42■■■■■ 4.38
SDHAF1-201ENST00000378887 CUX1P39880 1505 aa42.3■■■■■ 4.36
SDHAF1-201ENST00000378887 IFT140Q96RY7 1462 aa42.25■■■■■ 4.35
SDHAF1-201ENST00000378887 TARBP1Q13395 1621 aaKnown RBP42.24■■■■■ 4.35
SDHAF1-201ENST00000378887 POLA1P09884 1462 aaPredicted RBP42.23■■■■■ 4.35
SDHAF1-201ENST00000378887 ZNF608Q9ULD9 1512 aaPredicted RBP42.2■■■■■ 4.35
SDHAF1-201ENST00000378887 DNAJC5Q9H3Z4 198 aa42.12■■■■■ 4.33
SDHAF1-201ENST00000378887 FGD5Q6ZNL6 1462 aa42.08■■■■■ 4.33
SDHAF1-201ENST00000378887 RAD54L2Q9Y4B4 1467 aa42.03■■■■■ 4.32
SDHAF1-201ENST00000378887 EIF4G3O43432 1585 aaKnown RBP42.01■■■■■ 4.32
SDHAF1-201ENST00000378887 BIVM-ERCC5R4GMW8 1640 aa41.92■■■■■ 4.3
SDHAF1-201ENST00000378887 SYNJ1O43426 1573 aa41.92■■■■■ 4.3
SDHAF1-201ENST00000378887 WDR97A6NE52 1622 aa41.91■■■■■ 4.3
SDHAF1-201ENST00000378887 SOGA1O94964 1423 aa41.91■■■■■ 4.3
SDHAF1-201ENST00000378887 TOP2BQ02880 1626 aa41.88■■■■■ 4.3
SDHAF1-201ENST00000378887 AQRO60306 1485 aaKnown RBP eCLIP41.85■■■■■ 4.29
SDHAF1-201ENST00000378887 WRNQ14191 1432 aaPredicted RBP eCLIP41.85■■■■■ 4.29
SDHAF1-201ENST00000378887 TDRD9Q8NDG6 1382 aaKnown RBP41.72■■■■■ 4.27
SDHAF1-201ENST00000378887 ABCA10Q8WWZ4 1543 aa41.71■■■■■ 4.27
SDHAF1-201ENST00000378887 ABCA5Q8WWZ7 1642 aa41.63■■■■■ 4.26
SDHAF1-201ENST00000378887 CHD1O14646 1710 aa41.47■■■■■ 4.23
SDHAF1-201ENST00000378887 PBRM1Q86U86 1689 aa41.47■■■■■ 4.23
SDHAF1-201ENST00000378887 GRIN2BQ13224 1484 aa41.47■■■■■ 4.23
SDHAF1-201ENST00000378887 GAPVD1Q14C86 1478 aa41.47■■■■■ 4.23
SDHAF1-201ENST00000378887 SNAPC4Q5SXM2 1469 aa41.47■■■■■ 4.23
SDHAF1-201ENST00000378887 MAGI1Q96QZ7 1491 aaPredicted RBP41.4■■■■■ 4.22
SDHAF1-201ENST00000378887 OSCARQ8IYS5 282 aa41.39■■■■■ 4.22
SDHAF1-201ENST00000378887 SYNJ2O15056 1496 aa41.24■■■■■ 4.19
SDHAF1-201ENST00000378887 ADAMTS12P58397 1594 aa41.19■■■■■ 4.18
SDHAF1-201ENST00000378887 ERICH3Q5RHP9 1530 aa41.17■■■■■ 4.18
SDHAF1-201ENST00000378887 CLASP1Q7Z460 1538 aa41.12■■■■■ 4.17
SDHAF1-201ENST00000378887 FBLN2P98095 1184 aa41.03■■■■■ 4.16
SDHAF1-201ENST00000378887 RIMBP3CA6NJZ7 1639 aa41■■■■■ 4.15
SDHAF1-201ENST00000378887 RIMBP3BA6NNM3 1639 aa41■■■■■ 4.15
SDHAF1-201ENST00000378887 RIMBP3Q9UFD9 1639 aa41■■■■■ 4.15
SDHAF1-201ENST00000378887 GRIN2AQ12879 1464 aa40.99■■■■■ 4.15
SDHAF1-201ENST00000378887 FHAD1B1AJZ9 1412 aa40.99■■■■■ 4.15
SDHAF1-201ENST00000378887 CHMP7Q8WUX9 453 aaPredicted RBP40.98■■■■■ 4.15
SDHAF1-201ENST00000378887 ARHGEF11O15085 1522 aa40.96■■■■■ 4.15
SDHAF1-201ENST00000378887 IGF1RP08069 1367 aa40.9■■■■■ 4.14
SDHAF1-201ENST00000378887 NUP160Q12769 1436 aa40.9■■■■■ 4.14
SDHAF1-201ENST00000378887 KIF27Q86VH2 1401 aa40.9■■■■■ 4.14
SDHAF1-201ENST00000378887 CEP170Q5SW79 1584 aa40.89■■■■■ 4.14
SDHAF1-201ENST00000378887 CUL7Q14999 1698 aa40.75■■■■■ 4.11
SDHAF1-201ENST00000378887 RUSC2Q8N2Y8 1516 aa40.74■■■■■ 4.11
SDHAF1-201ENST00000378887 ARAP1Q96P48 1450 aa40.69■■■■■ 4.1
SDHAF1-201ENST00000378887 SHROOM2Q13796 1616 aa40.66■■■■■ 4.1
SDHAF1-201ENST00000378887 ERCC6L2Q5T890 1561 aa40.57■■■■■ 4.09
SDHAF1-201ENST00000378887 TRIM41Q8WV44 630 aa40.56■■■■■ 4.08
SDHAF1-201ENST00000378887 CARMIL1Q5VZK9 1371 aa40.53■■■■■ 4.08
SDHAF1-201ENST00000378887 KIAA0586Q9BVV6 1533 aa40.38■■■■■ 4.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms