RNA–Protein interactions for RNA: ENST00000215574.8

CDC34-201, Transcript of cell division cycle 34, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC34, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34-201ENST00000215574 NISCHQ9Y2I1 1504 aa60.52■■■■■ 7.28
CDC34-201ENST00000215574 CCDC180Q9P1Z9 1646 aa53.61■■■■■ 6.17
CDC34-201ENST00000215574 ABCC9O60706 1549 aa52.33■■■■■ 5.97
CDC34-201ENST00000215574 DCAF8L2P0C7V8 631 aa50.56■■■■■ 5.68
CDC34-201ENST00000215574 ZCCHC6Q5VYS8 1495 aaKnown RBP50.47■■■■■ 5.67
CDC34-201ENST00000215574 NACADO15069 1562 aa50.37■■■■■ 5.65
CDC34-201ENST00000215574 RB1CC1Q8TDY2 1594 aa50.37■■■■■ 5.65
CDC34-201ENST00000215574 MYO15BQ96JP2 1530 aa50.13■■■■■ 5.61
CDC34-201ENST00000215574 DCAF1Q9Y4B6 1507 aa50.03■■■■■ 5.6
CDC34-201ENST00000215574 UNC13AQ9UPW8 1703 aa49.23■■■■■ 5.47
CDC34-201ENST00000215574 SCRIBQ14160 1630 aa49.03■■■■■ 5.44
CDC34-201ENST00000215574 PABPN1Q86U42 306 aaKnown RBP eCLIP48.99■■■■■ 5.43
CDC34-201ENST00000215574 BICRAQ9NZM4 1560 aa48.89■■■■■ 5.42
CDC34-201ENST00000215574 SHROOM4Q9ULL8 1493 aa48.29■■■■■ 5.32
CDC34-201ENST00000215574 DNAJC5BQ9UF47 199 aa47.85■■■■■ 5.25
CDC34-201ENST00000215574 EIF4G1Q04637 1599 aaKnown RBP47.56■■■■■ 5.2
CDC34-201ENST00000215574 CC2D2AQ9P2K1 1620 aa47.31■■■■■ 5.16
CDC34-201ENST00000215574 CECR2Q9BXF3 1484 aa47.18■■■■■ 5.14
CDC34-201ENST00000215574 SMARCA4P51532 1647 aa46.89■■■■■ 5.1
CDC34-201ENST00000215574 BAZ1AQ9NRL2 1556 aaPredicted RBP46.86■■■■■ 5.09
CDC34-201ENST00000215574 MROH2BQ7Z745 1585 aa46.68■■■■■ 5.06
CDC34-201ENST00000215574 ATAD2BQ9ULI0 1458 aa46.6■■■■■ 5.05
CDC34-201ENST00000215574 NCAPD3P42695 1498 aa46.51■■■■■ 5.04
CDC34-201ENST00000215574 SMARCA2P51531 1590 aa46.51■■■■■ 5.04
CDC34-201ENST00000215574 PEG3Q9GZU2 1588 aa46.4■■■■■ 5.02
CDC34-201ENST00000215574 HMGXB3Q12766 1538 aa46.27■■■■■ 5
CDC34-201ENST00000215574 RSF1Q96T23 1441 aaPredicted RBP46.24■■■■■ 4.99
CDC34-201ENST00000215574 BAZ1BQ9UIG0 1483 aaKnown RBP46.21■■■■■ 4.99
CDC34-201ENST00000215574 WIZO95785 1651 aa46.18■■■■■ 4.98
CDC34-201ENST00000215574 TOP2AP11388 1531 aaKnown RBP45.67■■■■■ 4.9
CDC34-201ENST00000215574 NESP48681 1621 aa45.37■■■■■ 4.85
CDC34-201ENST00000215574 SUPT5HO00267 1087 aaKnown RBP45.34■■■■■ 4.85
CDC34-201ENST00000215574 LAMC3Q9Y6N6 1575 aa45.21■■■■■ 4.83
CDC34-201ENST00000215574 CADPSQ9ULU8 1353 aa45.19■■■■■ 4.82
CDC34-201ENST00000215574 CCDC88BA6NC98 1476 aa45.18■■■■■ 4.82
CDC34-201ENST00000215574 ERCC6Q03468 1493 aa45.05■■■■■ 4.8
CDC34-201ENST00000215574 CFTRP13569 1480 aa44.97■■■■■ 4.79
CDC34-201ENST00000215574 PDS5BQ9NTI5 1447 aa44.92■■■■■ 4.78
CDC34-201ENST00000215574 KIF21AQ7Z4S6 1674 aa44.78■■■■■ 4.76
CDC34-201ENST00000215574 FANCD2Q9BXW9 1451 aa44.67■■■■■ 4.74
CDC34-201ENST00000215574 CEP164Q9UPV0 1460 aa44.57■■■■■ 4.73
CDC34-201ENST00000215574 THOC2Q8NI27 1593 aaKnown RBP44.57■■■■■ 4.73
CDC34-201ENST00000215574 PRDM2Q13029 1718 aa44.56■■■■■ 4.72
CDC34-201ENST00000215574 MRC2Q9UBG0 1479 aa44.45■■■■■ 4.71
CDC34-201ENST00000215574 CUX2O14529 1486 aa44.44■■■■■ 4.7
CDC34-201ENST00000215574 WDR62O43379 1518 aa44.29■■■■■ 4.68
CDC34-201ENST00000215574 URB2Q14146 1524 aaKnown RBP44.22■■■■■ 4.67
CDC34-201ENST00000215574 TOPBP1Q92547 1522 aa43.98■■■■■ 4.63
CDC34-201ENST00000215574 ABCC8Q09428 1581 aa43.94■■■■■ 4.62
CDC34-201ENST00000215574 DNMBPQ6XZF7 1577 aa43.93■■■■■ 4.62
CDC34-201ENST00000215574 CUX1P39880 1505 aa43.77■■■■■ 4.6
CDC34-201ENST00000215574 POLA1P09884 1462 aaPredicted RBP43.64■■■■■ 4.58
CDC34-201ENST00000215574 IFT140Q96RY7 1462 aa43.62■■■■■ 4.57
CDC34-201ENST00000215574 WRNQ14191 1432 aaPredicted RBP eCLIP43.57■■■■■ 4.57
CDC34-201ENST00000215574 FGD5Q6ZNL6 1462 aa43.57■■■■■ 4.57
CDC34-201ENST00000215574 RAD54L2Q9Y4B4 1467 aa43.48■■■■■ 4.55
CDC34-201ENST00000215574 TARBP1Q13395 1621 aaKnown RBP43.47■■■■■ 4.55
CDC34-201ENST00000215574 SOGA1O94964 1423 aa43.47■■■■■ 4.55
CDC34-201ENST00000215574 SYNJ1O43426 1573 aa43.46■■■■■ 4.55
CDC34-201ENST00000215574 ZNF608Q9ULD9 1512 aaPredicted RBP43.46■■■■■ 4.55
CDC34-201ENST00000215574 TOP2BQ02880 1626 aa43.42■■■■■ 4.54
CDC34-201ENST00000215574 BIVM-ERCC5R4GMW8 1640 aa43.4■■■■■ 4.54
CDC34-201ENST00000215574 AQRO60306 1485 aaKnown RBP eCLIP43.26■■■■■ 4.524e-7■■■■■ 33.4
CDC34-201ENST00000215574 EIF4G3O43432 1585 aaKnown RBP43.25■■■■■ 4.51
CDC34-201ENST00000215574 TDRD9Q8NDG6 1382 aaKnown RBP43.23■■■■■ 4.51
CDC34-201ENST00000215574 WDR97A6NE52 1622 aa43.15■■■■■ 4.5
CDC34-201ENST00000215574 ABCA10Q8WWZ4 1543 aa43.14■■■■■ 4.5
CDC34-201ENST00000215574 GAPVD1Q14C86 1478 aa42.96■■■■■ 4.47
CDC34-201ENST00000215574 ABCA5Q8WWZ7 1642 aa42.93■■■■■ 4.46
CDC34-201ENST00000215574 GRIN2BQ13224 1484 aa42.9■■■■■ 4.46
CDC34-201ENST00000215574 SNAPC4Q5SXM2 1469 aa42.84■■■■■ 4.45
CDC34-201ENST00000215574 DNAJC5Q9H3Z4 198 aa42.82■■■■■ 4.45
CDC34-201ENST00000215574 PBRM1Q86U86 1689 aa42.81■■■■■ 4.44
CDC34-201ENST00000215574 TRIM41Q8WV44 630 aa42.76■■■■■ 4.44
CDC34-201ENST00000215574 MAGI1Q96QZ7 1491 aaPredicted RBP42.74■■■■■ 4.43
CDC34-201ENST00000215574 FBLN2P98095 1184 aa42.7■■■■■ 4.43
CDC34-201ENST00000215574 OSCARQ8IYS5 282 aa42.7■■■■■ 4.43
CDC34-201ENST00000215574 CHD1O14646 1710 aa42.64■■■■■ 4.42
CDC34-201ENST00000215574 KIF27Q86VH2 1401 aa42.63■■■■■ 4.42
CDC34-201ENST00000215574 ERICH3Q5RHP9 1530 aa42.61■■■■■ 4.41
CDC34-201ENST00000215574 CHMP7Q8WUX9 453 aaPredicted RBP42.6■■■■■ 4.41
CDC34-201ENST00000215574 SYNJ2O15056 1496 aa42.59■■■■■ 4.41
CDC34-201ENST00000215574 ADAMTS12P58397 1594 aa42.51■■■■■ 4.4
CDC34-201ENST00000215574 IGF1RP08069 1367 aa42.47■■■■■ 4.39
CDC34-201ENST00000215574 FHAD1B1AJZ9 1412 aa42.46■■■■■ 4.39
CDC34-201ENST00000215574 CHIC1Q5VXU3 224 aa42.44■■■■■ 4.38
CDC34-201ENST00000215574 RUSC2Q8N2Y8 1516 aa42.41■■■■■ 4.38
CDC34-201ENST00000215574 GRIN2AQ12879 1464 aa42.36■■■■■ 4.37
CDC34-201ENST00000215574 CUL7Q14999 1698 aa42.25■■■■■ 4.35
CDC34-201ENST00000215574 CARMIL1Q5VZK9 1371 aa42.21■■■■■ 4.35
CDC34-201ENST00000215574 CLASP1Q7Z460 1538 aa42.2■■■■■ 4.35
CDC34-201ENST00000215574 NUP160Q12769 1436 aa42.16■■■■■ 4.34
CDC34-201ENST00000215574 CEP170Q5SW79 1584 aa42.15■■■■■ 4.34
CDC34-201ENST00000215574 ARHGEF11O15085 1522 aa42■■■■■ 4.31
CDC34-201ENST00000215574 RAPGEF2Q9Y4G8 1499 aa41.96■■■■■ 4.31
CDC34-201ENST00000215574 RIMBP3CA6NJZ7 1639 aa41.96■■■■■ 4.31
CDC34-201ENST00000215574 RIMBP3BA6NNM3 1639 aa41.96■■■■■ 4.31
CDC34-201ENST00000215574 RIMBP3Q9UFD9 1639 aa41.96■■■■■ 4.31
CDC34-201ENST00000215574 EEA1Q15075 1411 aa41.95■■■■■ 4.31
CDC34-201ENST00000215574 CSRNP3Q8WYN3 585 aa41.94■■■■■ 4.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms