RNA–Protein interactions for RNA: ENST00000564917.5

TK2-216, Transcript of thymidine kinase 2, mitochondrial, humanhuman

TSL 3 BASIC

Gene TK2, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TK2-216ENST00000564917 NISCHQ9Y2I1 1504 aa57.73■■■■■ 6.83
TK2-216ENST00000564917 CCDC180Q9P1Z9 1646 aa51.57■■■■■ 5.85
TK2-216ENST00000564917 ABCC9O60706 1549 aa50.77■■■■■ 5.72
TK2-216ENST00000564917 RB1CC1Q8TDY2 1594 aa48.73■■■■■ 5.39
TK2-216ENST00000564917 NACADO15069 1562 aa48.56■■■■■ 5.36
TK2-216ENST00000564917 DCAF8L2P0C7V8 631 aa48.39■■■■■ 5.34
TK2-216ENST00000564917 MYO15BQ96JP2 1530 aa48.14■■■■■ 5.3
TK2-216ENST00000564917 ZCCHC6Q5VYS8 1495 aaKnown RBP47.99■■■■■ 5.27
TK2-216ENST00000564917 DCAF1Q9Y4B6 1507 aa47.77■■■■■ 5.24
TK2-216ENST00000564917 UNC13AQ9UPW8 1703 aa47.64■■■■■ 5.22
TK2-216ENST00000564917 PABPN1Q86U42 306 aaKnown RBP eCLIP47.35■■■■■ 5.17
TK2-216ENST00000564917 BICRAQ9NZM4 1560 aa47.22■■■■■ 5.15
TK2-216ENST00000564917 SCRIBQ14160 1630 aa46.97■■■■■ 5.11
TK2-216ENST00000564917 DNAJC5BQ9UF47 199 aa46.94■■■■■ 5.1
TK2-216ENST00000564917 SHROOM4Q9ULL8 1493 aa46.75■■■■■ 5.07
TK2-216ENST00000564917 EIF4G1Q04637 1599 aaKnown RBP46.03■■■■■ 4.96
TK2-216ENST00000564917 CC2D2AQ9P2K1 1620 aa45.95■■■■■ 4.95
TK2-216ENST00000564917 CECR2Q9BXF3 1484 aa45.68■■■■■ 4.9
TK2-216ENST00000564917 SMARCA4P51532 1647 aa44.9■■■■■ 4.78
TK2-216ENST00000564917 BAZ1AQ9NRL2 1556 aaPredicted RBP44.8■■■■■ 4.76
TK2-216ENST00000564917 NCAPD3P42695 1498 aa44.78■■■■■ 4.76
TK2-216ENST00000564917 ATAD2BQ9ULI0 1458 aa44.73■■■■■ 4.75
TK2-216ENST00000564917 SMARCA2P51531 1590 aa44.7■■■■■ 4.75
TK2-216ENST00000564917 HMGXB3Q12766 1538 aa44.55■■■■■ 4.72
TK2-216ENST00000564917 MROH2BQ7Z745 1585 aa44.47■■■■■ 4.71
TK2-216ENST00000564917 PEG3Q9GZU2 1588 aa44.47■■■■■ 4.71
TK2-216ENST00000564917 BAZ1BQ9UIG0 1483 aaKnown RBP44.36■■■■■ 4.69
TK2-216ENST00000564917 WIZO95785 1651 aa43.99■■■■■ 4.63
TK2-216ENST00000564917 ERCC6Q03468 1493 aa43.87■■■■■ 4.61
TK2-216ENST00000564917 NESP48681 1621 aa43.81■■■■■ 4.6
TK2-216ENST00000564917 RSF1Q96T23 1441 aaPredicted RBP43.8■■■■■ 4.6
TK2-216ENST00000564917 LAMC3Q9Y6N6 1575 aa43.71■■■■■ 4.59
TK2-216ENST00000564917 CUX2O14529 1486 aa43.53■■■■■ 4.56
TK2-216ENST00000564917 TOP2AP11388 1531 aaKnown RBP43.5■■■■■ 4.55
TK2-216ENST00000564917 CADPSQ9ULU8 1353 aa43.46■■■■■ 4.55
TK2-216ENST00000564917 PDS5BQ9NTI5 1447 aa43.42■■■■■ 4.54
TK2-216ENST00000564917 KIF21AQ7Z4S6 1674 aa43.34■■■■■ 4.53
TK2-216ENST00000564917 THOC2Q8NI27 1593 aaKnown RBP43.27■■■■■ 4.52
TK2-216ENST00000564917 CFTRP13569 1480 aa43.11■■■■■ 4.49
TK2-216ENST00000564917 MRC2Q9UBG0 1479 aa42.98■■■■■ 4.47
TK2-216ENST00000564917 CCDC88BA6NC98 1476 aa42.97■■■■■ 4.47
TK2-216ENST00000564917 FANCD2Q9BXW9 1451 aa42.96■■■■■ 4.47
TK2-216ENST00000564917 CEP164Q9UPV0 1460 aa42.96■■■■■ 4.47
TK2-216ENST00000564917 WDR62O43379 1518 aa42.85■■■■■ 4.45
TK2-216ENST00000564917 PRDM2Q13029 1718 aa42.85■■■■■ 4.45
TK2-216ENST00000564917 DNAJC5Q9H3Z4 198 aa42.74■■■■■ 4.43
TK2-216ENST00000564917 URB2Q14146 1524 aaKnown RBP42.54■■■■■ 4.4
TK2-216ENST00000564917 SUPT5HO00267 1087 aaKnown RBP42.37■■■■■ 4.37
TK2-216ENST00000564917 ABCC8Q09428 1581 aa42.26■■■■■ 4.36
TK2-216ENST00000564917 TOPBP1Q92547 1522 aa42.23■■■■■ 4.35
TK2-216ENST00000564917 DNMBPQ6XZF7 1577 aa42.16■■■■■ 4.34
TK2-216ENST00000564917 IFT140Q96RY7 1462 aa42.08■■■■■ 4.33
TK2-216ENST00000564917 ZNF608Q9ULD9 1512 aaPredicted RBP41.88■■■■■ 4.29
TK2-216ENST00000564917 POLA1P09884 1462 aaPredicted RBP41.83■■■■■ 4.29
TK2-216ENST00000564917 TARBP1Q13395 1621 aaKnown RBP41.81■■■■■ 4.28
TK2-216ENST00000564917 EIF4G3O43432 1585 aaKnown RBP41.74■■■■■ 4.27
TK2-216ENST00000564917 CUX1P39880 1505 aa41.74■■■■■ 4.27
TK2-216ENST00000564917 FGD5Q6ZNL6 1462 aa41.67■■■■■ 4.26
TK2-216ENST00000564917 SOGA1O94964 1423 aa41.67■■■■■ 4.26
TK2-216ENST00000564917 OSCARQ8IYS5 282 aa41.65■■■■■ 4.26
TK2-216ENST00000564917 RAD54L2Q9Y4B4 1467 aa41.64■■■■■ 4.26
TK2-216ENST00000564917 AQRO60306 1485 aaKnown RBP eCLIP41.6■■■■■ 4.252e-9■■■■■ 39.4
TK2-216ENST00000564917 WDR97A6NE52 1622 aa41.51■■■■■ 4.24
TK2-216ENST00000564917 TDRD9Q8NDG6 1382 aaKnown RBP41.46■■■■■ 4.23
TK2-216ENST00000564917 CHD1O14646 1710 aa41.34■■■■■ 4.21
TK2-216ENST00000564917 WRNQ14191 1432 aaPredicted RBP eCLIP41.34■■■■■ 4.21
TK2-216ENST00000564917 BIVM-ERCC5R4GMW8 1640 aa41.33■■■■■ 4.21
TK2-216ENST00000564917 TOP2BQ02880 1626 aa41.3■■■■■ 4.2
TK2-216ENST00000564917 ABCA10Q8WWZ4 1543 aa41.27■■■■■ 4.2
TK2-216ENST00000564917 GRIN2BQ13224 1484 aa41.24■■■■■ 4.19
TK2-216ENST00000564917 SYNJ1O43426 1573 aa41.24■■■■■ 4.19
TK2-216ENST00000564917 SNAPC4Q5SXM2 1469 aa41.22■■■■■ 4.19
TK2-216ENST00000564917 FBLN2P98095 1184 aa41.21■■■■■ 4.19
TK2-216ENST00000564917 TRIM41Q8WV44 630 aa41.21■■■■■ 4.19
TK2-216ENST00000564917 GAPVD1Q14C86 1478 aa41.19■■■■■ 4.18
TK2-216ENST00000564917 MAGI1Q96QZ7 1491 aaPredicted RBP41.19■■■■■ 4.18
TK2-216ENST00000564917 PBRM1Q86U86 1689 aa41.17■■■■■ 4.18
TK2-216ENST00000564917 ABCA5Q8WWZ7 1642 aa41.14■■■■■ 4.18
TK2-216ENST00000564917 RIMBP3CA6NJZ7 1639 aa41.06■■■■■ 4.16
TK2-216ENST00000564917 RIMBP3BA6NNM3 1639 aa41.06■■■■■ 4.16
TK2-216ENST00000564917 RIMBP3Q9UFD9 1639 aa41.06■■■■■ 4.16
TK2-216ENST00000564917 CHMP7Q8WUX9 453 aaPredicted RBP41.05■■■■■ 4.16
TK2-216ENST00000564917 SYNJ2O15056 1496 aa41.02■■■■■ 4.16
TK2-216ENST00000564917 ARHGEF11O15085 1522 aa40.96■■■■■ 4.15
TK2-216ENST00000564917 CLASP1Q7Z460 1538 aa40.83■■■■■ 4.13
TK2-216ENST00000564917 ERICH3Q5RHP9 1530 aa40.78■■■■■ 4.12
TK2-216ENST00000564917 ADAMTS12P58397 1594 aa40.78■■■■■ 4.12
TK2-216ENST00000564917 FHAD1B1AJZ9 1412 aa40.7■■■■■ 4.11
TK2-216ENST00000564917 GRIN2AQ12879 1464 aa40.7■■■■■ 4.11
TK2-216ENST00000564917 CYB5RLQ6IPT4 315 aa40.61■■■■■ 4.09
TK2-216ENST00000564917 ARAP1Q96P48 1450 aa40.59■■■■■ 4.09
TK2-216ENST00000564917 NUP160Q12769 1436 aa40.53■■■■■ 4.08
TK2-216ENST00000564917 KIF27Q86VH2 1401 aa40.51■■■■■ 4.08
TK2-216ENST00000564917 CEP170Q5SW79 1584 aa40.51■■■■■ 4.08
TK2-216ENST00000564917 IGF1RP08069 1367 aa40.37■■■■■ 4.05
TK2-216ENST00000564917 CUL7Q14999 1698 aa40.35■■■■■ 4.05
TK2-216ENST00000564917 SHROOM2Q13796 1616 aa40.3■■■■■ 4.04
TK2-216ENST00000564917 ERCC6L2Q5T890 1561 aa40.2■■■■■ 4.03
TK2-216ENST00000564917 RUSC2Q8N2Y8 1516 aa40.18■■■■■ 4.02
TK2-216ENST00000564917 CARMIL1Q5VZK9 1371 aa40.14■■■■■ 4.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms