RNA–Protein interactions for RNA: ENST00000530022.5

RPL27A-206, Transcript of ribosomal protein L27a, humanhuman

TSL 1 (best) BASIC

Gene RPL27A, Length 878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27A-206ENST00000530022 NISCHQ9Y2I1 1504 aa59.75■■■■■ 7.15
RPL27A-206ENST00000530022 CCDC180Q9P1Z9 1646 aa52.98■■■■■ 6.07
RPL27A-206ENST00000530022 ABCC9O60706 1549 aa51.65■■■■■ 5.86
RPL27A-206ENST00000530022 ZCCHC6Q5VYS8 1495 aaKnown RBP49.83■■■■■ 5.57
RPL27A-206ENST00000530022 DCAF8L2P0C7V8 631 aa49.77■■■■■ 5.56
RPL27A-206ENST00000530022 NACADO15069 1562 aa49.75■■■■■ 5.56
RPL27A-206ENST00000530022 RB1CC1Q8TDY2 1594 aa49.75■■■■■ 5.55
RPL27A-206ENST00000530022 MYO15BQ96JP2 1530 aa49.55■■■■■ 5.52
RPL27A-206ENST00000530022 DCAF1Q9Y4B6 1507 aa49.44■■■■■ 5.5
RPL27A-206ENST00000530022 UNC13AQ9UPW8 1703 aa48.69■■■■■ 5.38
RPL27A-206ENST00000530022 SCRIBQ14160 1630 aa48.39■■■■■ 5.34
RPL27A-206ENST00000530022 PABPN1Q86U42 306 aaKnown RBP eCLIP48.32■■■■■ 5.33
RPL27A-206ENST00000530022 BICRAQ9NZM4 1560 aa48.3■■■■■ 5.32
RPL27A-206ENST00000530022 SHROOM4Q9ULL8 1493 aa47.74■■■■■ 5.23
RPL27A-206ENST00000530022 DNAJC5BQ9UF47 199 aa47.26■■■■■ 5.16
RPL27A-206ENST00000530022 EIF4G1Q04637 1599 aaKnown RBP46.98■■■■■ 5.11
RPL27A-206ENST00000530022 CC2D2AQ9P2K1 1620 aa46.73■■■■■ 5.07
RPL27A-206ENST00000530022 CECR2Q9BXF3 1484 aa46.56■■■■■ 5.04
RPL27A-206ENST00000530022 SMARCA4P51532 1647 aa46.31■■■■■ 5
RPL27A-206ENST00000530022 BAZ1AQ9NRL2 1556 aaPredicted RBP46.26■■■■■ 5
RPL27A-206ENST00000530022 MROH2BQ7Z745 1585 aa46.08■■■■■ 4.97
RPL27A-206ENST00000530022 ATAD2BQ9ULI0 1458 aa46■■■■■ 4.95
RPL27A-206ENST00000530022 NCAPD3P42695 1498 aa45.93■■■■■ 4.94
RPL27A-206ENST00000530022 SMARCA2P51531 1590 aa45.92■■■■■ 4.94
RPL27A-206ENST00000530022 PEG3Q9GZU2 1588 aa45.86■■■■■ 4.93
RPL27A-206ENST00000530022 HMGXB3Q12766 1538 aa45.72■■■■■ 4.91
RPL27A-206ENST00000530022 RSF1Q96T23 1441 aaPredicted RBP45.63■■■■■ 4.9
RPL27A-206ENST00000530022 BAZ1BQ9UIG0 1483 aaKnown RBP45.61■■■■■ 4.89
RPL27A-206ENST00000530022 WIZO95785 1651 aa45.58■■■■■ 4.89
RPL27A-206ENST00000530022 TOP2AP11388 1531 aaKnown RBP45.09■■■■■ 4.81
RPL27A-206ENST00000530022 NESP48681 1621 aa44.79■■■■■ 4.76
RPL27A-206ENST00000530022 LAMC3Q9Y6N6 1575 aa44.66■■■■■ 4.74
RPL27A-206ENST00000530022 CADPSQ9ULU8 1353 aa44.61■■■■■ 4.73
RPL27A-206ENST00000530022 SUPT5HO00267 1087 aaKnown RBP44.61■■■■■ 4.73
RPL27A-206ENST00000530022 CCDC88BA6NC98 1476 aa44.58■■■■■ 4.73
RPL27A-206ENST00000530022 ERCC6Q03468 1493 aa44.45■■■■■ 4.71
RPL27A-206ENST00000530022 CFTRP13569 1480 aa44.4■■■■■ 4.7
RPL27A-206ENST00000530022 PDS5BQ9NTI5 1447 aa44.34■■■■■ 4.69
RPL27A-206ENST00000530022 KIF21AQ7Z4S6 1674 aa44.25■■■■■ 4.67
RPL27A-206ENST00000530022 FANCD2Q9BXW9 1451 aa44.09■■■■■ 4.65
RPL27A-206ENST00000530022 PRDM2Q13029 1718 aa44.05■■■■■ 4.64
RPL27A-206ENST00000530022 THOC2Q8NI27 1593 aaKnown RBP44.05■■■■■ 4.64
RPL27A-206ENST00000530022 CEP164Q9UPV0 1460 aa44■■■■■ 4.63
RPL27A-206ENST00000530022 CUX2O14529 1486 aa43.92■■■■■ 4.62
RPL27A-206ENST00000530022 MRC2Q9UBG0 1479 aa43.89■■■■■ 4.62
RPL27A-206ENST00000530022 WDR62O43379 1518 aa43.76■■■■■ 4.6
RPL27A-206ENST00000530022 URB2Q14146 1524 aaKnown RBP43.67■■■■■ 4.58
RPL27A-206ENST00000530022 TOPBP1Q92547 1522 aa43.43■■■■■ 4.54
RPL27A-206ENST00000530022 ABCC8Q09428 1581 aa43.38■■■■■ 4.54
RPL27A-206ENST00000530022 DNMBPQ6XZF7 1577 aa43.38■■■■■ 4.54
RPL27A-206ENST00000530022 CUX1P39880 1505 aa43.2■■■■■ 4.51
RPL27A-206ENST00000530022 POLA1P09884 1462 aaPredicted RBP43.08■■■■■ 4.49
RPL27A-206ENST00000530022 IFT140Q96RY7 1462 aa43.07■■■■■ 4.49
RPL27A-206ENST00000530022 FGD5Q6ZNL6 1462 aa43■■■■■ 4.47
RPL27A-206ENST00000530022 WRNQ14191 1432 aaPredicted RBP eCLIP42.98■■■■■ 4.47
RPL27A-206ENST00000530022 TARBP1Q13395 1621 aaKnown RBP42.94■■■■■ 4.46
RPL27A-206ENST00000530022 ZNF608Q9ULD9 1512 aaPredicted RBP42.91■■■■■ 4.46
RPL27A-206ENST00000530022 RAD54L2Q9Y4B4 1467 aa42.9■■■■■ 4.46
RPL27A-206ENST00000530022 SYNJ1O43426 1573 aa42.9■■■■■ 4.46
RPL27A-206ENST00000530022 SOGA1O94964 1423 aa42.88■■■■■ 4.46
RPL27A-206ENST00000530022 TOP2BQ02880 1626 aa42.87■■■■■ 4.45
RPL27A-206ENST00000530022 BIVM-ERCC5R4GMW8 1640 aa42.86■■■■■ 4.45
RPL27A-206ENST00000530022 EIF4G3O43432 1585 aaKnown RBP42.72■■■■■ 4.43
RPL27A-206ENST00000530022 AQRO60306 1485 aaKnown RBP eCLIP42.68■■■■■ 4.421e-7■■■■□ 22.9
RPL27A-206ENST00000530022 WDR97A6NE52 1622 aa42.64■■■■■ 4.42
RPL27A-206ENST00000530022 TDRD9Q8NDG6 1382 aaKnown RBP42.64■■■■■ 4.42
RPL27A-206ENST00000530022 ABCA10Q8WWZ4 1543 aa42.6■■■■■ 4.41
RPL27A-206ENST00000530022 ABCA5Q8WWZ7 1642 aa42.41■■■■■ 4.38
RPL27A-206ENST00000530022 GAPVD1Q14C86 1478 aa42.39■■■■■ 4.38
RPL27A-206ENST00000530022 GRIN2BQ13224 1484 aa42.36■■■■■ 4.37
RPL27A-206ENST00000530022 DNAJC5Q9H3Z4 198 aa42.32■■■■■ 4.37
RPL27A-206ENST00000530022 PBRM1Q86U86 1689 aa42.29■■■■■ 4.36
RPL27A-206ENST00000530022 SNAPC4Q5SXM2 1469 aa42.29■■■■■ 4.36
RPL27A-206ENST00000530022 MAGI1Q96QZ7 1491 aaPredicted RBP42.21■■■■■ 4.35
RPL27A-206ENST00000530022 CHD1O14646 1710 aa42.13■■■■■ 4.33
RPL27A-206ENST00000530022 OSCARQ8IYS5 282 aa42.13■■■■■ 4.33
RPL27A-206ENST00000530022 TRIM41Q8WV44 630 aa42.09■■■■■ 4.33
RPL27A-206ENST00000530022 ERICH3Q5RHP9 1530 aa42.08■■■■■ 4.33
RPL27A-206ENST00000530022 FBLN2P98095 1184 aa42.07■■■■■ 4.33
RPL27A-206ENST00000530022 SYNJ2O15056 1496 aa42.05■■■■■ 4.32
RPL27A-206ENST00000530022 KIF27Q86VH2 1401 aa42.04■■■■■ 4.32
RPL27A-206ENST00000530022 CHMP7Q8WUX9 453 aaPredicted RBP42■■■■■ 4.31
RPL27A-206ENST00000530022 ADAMTS12P58397 1594 aa41.98■■■■■ 4.31
RPL27A-206ENST00000530022 FHAD1B1AJZ9 1412 aa41.91■■■■■ 4.3
RPL27A-206ENST00000530022 IGF1RP08069 1367 aa41.89■■■■■ 4.3
RPL27A-206ENST00000530022 RUSC2Q8N2Y8 1516 aa41.82■■■■■ 4.29
RPL27A-206ENST00000530022 GRIN2AQ12879 1464 aa41.81■■■■■ 4.28
RPL27A-206ENST00000530022 CHIC1Q5VXU3 224 aa41.81■■■■■ 4.28
RPL27A-206ENST00000530022 CUL7Q14999 1698 aa41.73■■■■■ 4.27
RPL27A-206ENST00000530022 CLASP1Q7Z460 1538 aa41.7■■■■■ 4.27
RPL27A-206ENST00000530022 NUP160Q12769 1436 aa41.64■■■■■ 4.26
RPL27A-206ENST00000530022 CEP170Q5SW79 1584 aa41.63■■■■■ 4.25
RPL27A-206ENST00000530022 CARMIL1Q5VZK9 1371 aa41.63■■■■■ 4.25
RPL27A-206ENST00000530022 ARHGEF11O15085 1522 aa41.49■■■■■ 4.23
RPL27A-206ENST00000530022 RIMBP3CA6NJZ7 1639 aa41.47■■■■■ 4.23
RPL27A-206ENST00000530022 RIMBP3BA6NNM3 1639 aa41.47■■■■■ 4.23
RPL27A-206ENST00000530022 RIMBP3Q9UFD9 1639 aa41.47■■■■■ 4.23
RPL27A-206ENST00000530022 RAPGEF2Q9Y4G8 1499 aa41.4■■■■■ 4.22
RPL27A-206ENST00000530022 EEA1Q15075 1411 aa41.39■■■■■ 4.22
RPL27A-206ENST00000530022 PRXQ9BXM0 1461 aa41.34■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms