RNA–Protein interactions for RNA: ENST00000360454.6

CLPSL2-201, Transcript of colipase like 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLPSL2, Length 488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPSL2-201ENST00000360454 NISCHQ9Y2I1 1504 aa55.4■■■■■ 6.46
CLPSL2-201ENST00000360454 CCDC180Q9P1Z9 1646 aa49.73■■■■■ 5.55
CLPSL2-201ENST00000360454 ABCC9O60706 1549 aa49.7■■■■■ 5.55
CLPSL2-201ENST00000360454 RB1CC1Q8TDY2 1594 aa47.32■■■■■ 5.17
CLPSL2-201ENST00000360454 NACADO15069 1562 aa47■■■■■ 5.11
CLPSL2-201ENST00000360454 DCAF8L2P0C7V8 631 aa46.7■■■■■ 5.07
CLPSL2-201ENST00000360454 DNAJC5BQ9UF47 199 aa46.59■■■■■ 5.05
CLPSL2-201ENST00000360454 MYO15BQ96JP2 1530 aa46.35■■■■■ 5.01
CLPSL2-201ENST00000360454 UNC13AQ9UPW8 1703 aa46.28■■■■■ 5
CLPSL2-201ENST00000360454 PABPN1Q86U42 306 aaKnown RBP eCLIP46.25■■■■■ 4.99
CLPSL2-201ENST00000360454 BICRAQ9NZM4 1560 aa45.95■■■■■ 4.95
CLPSL2-201ENST00000360454 ZCCHC6Q5VYS8 1495 aaKnown RBP45.93■■■■■ 4.94
CLPSL2-201ENST00000360454 DCAF1Q9Y4B6 1507 aa45.77■■■■■ 4.92
CLPSL2-201ENST00000360454 SHROOM4Q9ULL8 1493 aa45.34■■■■■ 4.85
CLPSL2-201ENST00000360454 SCRIBQ14160 1630 aa45.3■■■■■ 4.84
CLPSL2-201ENST00000360454 CC2D2AQ9P2K1 1620 aa44.91■■■■■ 4.78
CLPSL2-201ENST00000360454 EIF4G1Q04637 1599 aaKnown RBP44.82■■■■■ 4.76
CLPSL2-201ENST00000360454 CECR2Q9BXF3 1484 aa44.78■■■■■ 4.76
CLPSL2-201ENST00000360454 NCAPD3P42695 1498 aa43.38■■■■■ 4.53
CLPSL2-201ENST00000360454 ATAD2BQ9ULI0 1458 aa43.25■■■■■ 4.51
CLPSL2-201ENST00000360454 SMARCA4P51532 1647 aa43.22■■■■■ 4.51
CLPSL2-201ENST00000360454 SMARCA2P51531 1590 aa43.15■■■■■ 4.5
CLPSL2-201ENST00000360454 HMGXB3Q12766 1538 aa43.07■■■■■ 4.49
CLPSL2-201ENST00000360454 BAZ1AQ9NRL2 1556 aaPredicted RBP43■■■■■ 4.47
CLPSL2-201ENST00000360454 ERCC6Q03468 1493 aa42.92■■■■■ 4.46
CLPSL2-201ENST00000360454 CUX2O14529 1486 aa42.84■■■■■ 4.45
CLPSL2-201ENST00000360454 BAZ1BQ9UIG0 1483 aaKnown RBP42.84■■■■■ 4.45
CLPSL2-201ENST00000360454 PEG3Q9GZU2 1588 aa42.81■■■■■ 4.44
CLPSL2-201ENST00000360454 DNAJC5Q9H3Z4 198 aa42.78■■■■■ 4.44
CLPSL2-201ENST00000360454 NESP48681 1621 aa42.7■■■■■ 4.43
CLPSL2-201ENST00000360454 MROH2BQ7Z745 1585 aa42.69■■■■■ 4.43
CLPSL2-201ENST00000360454 LAMC3Q9Y6N6 1575 aa42.4■■■■■ 4.38
CLPSL2-201ENST00000360454 THOC2Q8NI27 1593 aaKnown RBP42.29■■■■■ 4.36
CLPSL2-201ENST00000360454 WIZO95785 1651 aa42.18■■■■■ 4.34
CLPSL2-201ENST00000360454 KIF21AQ7Z4S6 1674 aa42.17■■■■■ 4.34
CLPSL2-201ENST00000360454 PDS5BQ9NTI5 1447 aa42.15■■■■■ 4.34
CLPSL2-201ENST00000360454 CADPSQ9ULU8 1353 aa42.06■■■■■ 4.32
CLPSL2-201ENST00000360454 MRC2Q9UBG0 1479 aa41.8■■■■■ 4.28
CLPSL2-201ENST00000360454 RSF1Q96T23 1441 aaPredicted RBP41.8■■■■■ 4.28
CLPSL2-201ENST00000360454 WDR62O43379 1518 aa41.71■■■■■ 4.27
CLPSL2-201ENST00000360454 TOP2AP11388 1531 aaKnown RBP41.65■■■■■ 4.26
CLPSL2-201ENST00000360454 CEP164Q9UPV0 1460 aa41.65■■■■■ 4.26
CLPSL2-201ENST00000360454 CFTRP13569 1480 aa41.6■■■■■ 4.25
CLPSL2-201ENST00000360454 FANCD2Q9BXW9 1451 aa41.6■■■■■ 4.25
CLPSL2-201ENST00000360454 URB2Q14146 1524 aaKnown RBP41.26■■■■■ 4.2
CLPSL2-201ENST00000360454 PRDM2Q13029 1718 aa41.21■■■■■ 4.19
CLPSL2-201ENST00000360454 CCDC88BA6NC98 1476 aa41.16■■■■■ 4.18
CLPSL2-201ENST00000360454 TRIM41Q8WV44 630 aa40.91■■■■■ 4.14
CLPSL2-201ENST00000360454 OSCARQ8IYS5 282 aa40.85■■■■■ 4.13
CLPSL2-201ENST00000360454 TOPBP1Q92547 1522 aa40.82■■■■■ 4.12
CLPSL2-201ENST00000360454 IFT140Q96RY7 1462 aa40.8■■■■■ 4.12
CLPSL2-201ENST00000360454 ZNF608Q9ULD9 1512 aaPredicted RBP40.74■■■■■ 4.11
CLPSL2-201ENST00000360454 ABCC8Q09428 1581 aa40.71■■■■■ 4.11
CLPSL2-201ENST00000360454 DNMBPQ6XZF7 1577 aa40.67■■■■■ 4.1
CLPSL2-201ENST00000360454 EIF4G3O43432 1585 aaKnown RBP40.53■■■■■ 4.08
CLPSL2-201ENST00000360454 TARBP1Q13395 1621 aaKnown RBP40.45■■■■■ 4.07
CLPSL2-201ENST00000360454 POLA1P09884 1462 aaPredicted RBP40.39■■■■■ 4.06
CLPSL2-201ENST00000360454 RIMBP3CA6NJZ7 1639 aa40.36■■■■■ 4.05
CLPSL2-201ENST00000360454 RIMBP3BA6NNM3 1639 aa40.36■■■■■ 4.05
CLPSL2-201ENST00000360454 RIMBP3Q9UFD9 1639 aa40.36■■■■■ 4.05
CLPSL2-201ENST00000360454 AQRO60306 1485 aaKnown RBP eCLIP40.36■■■■■ 4.05
CLPSL2-201ENST00000360454 ARHGEF11O15085 1522 aa40.24■■■■■ 4.03
CLPSL2-201ENST00000360454 CHD1O14646 1710 aa40.24■■■■■ 4.03
CLPSL2-201ENST00000360454 RAD54L2Q9Y4B4 1467 aa40.24■■■■■ 4.03
CLPSL2-201ENST00000360454 SOGA1O94964 1423 aa40.19■■■■■ 4.02
CLPSL2-201ENST00000360454 FGD5Q6ZNL6 1462 aa40.14■■■■■ 4.02
CLPSL2-201ENST00000360454 CUX1P39880 1505 aa40.12■■■■■ 4.01
CLPSL2-201ENST00000360454 TDRD9Q8NDG6 1382 aaKnown RBP40.11■■■■■ 4.01
CLPSL2-201ENST00000360454 FBLN2P98095 1184 aa40.08■■■■■ 4.01
CLPSL2-201ENST00000360454 WDR97A6NE52 1622 aa40.05■■■■■ 4
CLPSL2-201ENST00000360454 SNAPC4Q5SXM2 1469 aa39.97■■■■□ 3.99
CLPSL2-201ENST00000360454 SUPT5HO00267 1087 aaKnown RBP39.93■■■■□ 3.98
CLPSL2-201ENST00000360454 CYB5RLQ6IPT4 315 aa39.9■■■■□ 3.98
CLPSL2-201ENST00000360454 MAGI1Q96QZ7 1491 aaPredicted RBP39.87■■■■□ 3.97
CLPSL2-201ENST00000360454 GRIN2BQ13224 1484 aa39.86■■■■□ 3.97
CLPSL2-201ENST00000360454 ARAP1Q96P48 1450 aa39.84■■■■□ 3.97
CLPSL2-201ENST00000360454 CHMP7Q8WUX9 453 aaPredicted RBP39.78■■■■□ 3.96
CLPSL2-201ENST00000360454 CLASP1Q7Z460 1538 aa39.77■■■■□ 3.96
CLPSL2-201ENST00000360454 SYNJ1O43426 1573 aa39.74■■■■□ 3.95
CLPSL2-201ENST00000360454 SYNJ2O15056 1496 aa39.73■■■■□ 3.95
CLPSL2-201ENST00000360454 GAPVD1Q14C86 1478 aa39.72■■■■□ 3.95
CLPSL2-201ENST00000360454 PBRM1Q86U86 1689 aa39.72■■■■□ 3.95
CLPSL2-201ENST00000360454 ABCA10Q8WWZ4 1543 aa39.69■■■■□ 3.94
CLPSL2-201ENST00000360454 ABCA5Q8WWZ7 1642 aa39.65■■■■□ 3.94
CLPSL2-201ENST00000360454 WRNQ14191 1432 aaPredicted RBP eCLIP39.52■■■■□ 3.92
CLPSL2-201ENST00000360454 BIVM-ERCC5R4GMW8 1640 aa39.48■■■■□ 3.91
CLPSL2-201ENST00000360454 TOP2BQ02880 1626 aa39.47■■■■□ 3.91
CLPSL2-201ENST00000360454 TRHP20396 242 aaPredicted RBP39.44■■■■□ 3.9
CLPSL2-201ENST00000360454 ADAMTS12P58397 1594 aa39.35■■■■□ 3.89
CLPSL2-201ENST00000360454 GRIN2AQ12879 1464 aa39.35■■■■□ 3.89
CLPSL2-201ENST00000360454 NUP160Q12769 1436 aa39.23■■■■□ 3.87
CLPSL2-201ENST00000360454 FHAD1B1AJZ9 1412 aa39.22■■■■□ 3.87
CLPSL2-201ENST00000360454 CEP170Q5SW79 1584 aa39.21■■■■□ 3.87
CLPSL2-201ENST00000360454 ERICH3Q5RHP9 1530 aa39.19■■■■□ 3.86
CLPSL2-201ENST00000360454 ERCC6L2Q5T890 1561 aa39.14■■■■□ 3.86
CLPSL2-201ENST00000360454 SHROOM2Q13796 1616 aa39.06■■■■□ 3.84
CLPSL2-201ENST00000360454 PRG4Q92954 1404 aaPredicted RBP38.82■■■■□ 3.81
CLPSL2-201ENST00000360454 RUSC2Q8N2Y8 1516 aa38.79■■■■□ 3.8
CLPSL2-201ENST00000360454 JPH4Q96JJ6 628 aa38.78■■■■□ 3.8
CLPSL2-201ENST00000360454 KIF27Q86VH2 1401 aa38.7■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms