RNA–Protein interactions for RNA: ENST00000437480.1

GLI3-203, Transcript of GLI family zinc finger 3, humanhuman

TSL 2 BASIC

Gene GLI3, Length 451 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-203ENST00000437480 NISCHQ9Y2I1 1504 aa54.01■■■■■ 6.24
GLI3-203ENST00000437480 ABCC9O60706 1549 aa49.1■■■■■ 5.45
GLI3-203ENST00000437480 CCDC180Q9P1Z9 1646 aa48.54■■■■■ 5.36
GLI3-203ENST00000437480 RB1CC1Q8TDY2 1594 aa46.52■■■■■ 5.04
GLI3-203ENST00000437480 DNAJC5BQ9UF47 199 aa46.44■■■■■ 5.02
GLI3-203ENST00000437480 NACADO15069 1562 aa46.11■■■■■ 4.97
GLI3-203ENST00000437480 DCAF8L2P0C7V8 631 aa45.93■■■■■ 4.94
GLI3-203ENST00000437480 PABPN1Q86U42 306 aaKnown RBP eCLIP45.71■■■■■ 4.91
GLI3-203ENST00000437480 MYO15BQ96JP2 1530 aa45.36■■■■■ 4.85
GLI3-203ENST00000437480 UNC13AQ9UPW8 1703 aa45.17■■■■■ 4.82
GLI3-203ENST00000437480 BICRAQ9NZM4 1560 aa45.09■■■■■ 4.81
GLI3-203ENST00000437480 ZCCHC6Q5VYS8 1495 aaKnown RBP44.66■■■■■ 4.74
GLI3-203ENST00000437480 DCAF1Q9Y4B6 1507 aa44.6■■■■■ 4.73
GLI3-203ENST00000437480 SHROOM4Q9ULL8 1493 aa44.59■■■■■ 4.73
GLI3-203ENST00000437480 CECR2Q9BXF3 1484 aa44.32■■■■■ 4.69
GLI3-203ENST00000437480 SCRIBQ14160 1630 aa44.25■■■■■ 4.67
GLI3-203ENST00000437480 CC2D2AQ9P2K1 1620 aa44.25■■■■■ 4.67
GLI3-203ENST00000437480 EIF4G1Q04637 1599 aaKnown RBP44.09■■■■■ 4.65
GLI3-203ENST00000437480 DNAJC5Q9H3Z4 198 aa43.04■■■■■ 4.48
GLI3-203ENST00000437480 NCAPD3P42695 1498 aa42.62■■■■■ 4.41
GLI3-203ENST00000437480 CUX2O14529 1486 aa42.54■■■■■ 4.4
GLI3-203ENST00000437480 ERCC6Q03468 1493 aa42.5■■■■■ 4.39
GLI3-203ENST00000437480 ATAD2BQ9ULI0 1458 aa42.41■■■■■ 4.38
GLI3-203ENST00000437480 SMARCA2P51531 1590 aa42.26■■■■■ 4.36
GLI3-203ENST00000437480 HMGXB3Q12766 1538 aa42.2■■■■■ 4.35
GLI3-203ENST00000437480 SMARCA4P51532 1647 aa42.17■■■■■ 4.34
GLI3-203ENST00000437480 NESP48681 1621 aa42.01■■■■■ 4.32
GLI3-203ENST00000437480 BAZ1BQ9UIG0 1483 aaKnown RBP41.99■■■■■ 4.31
GLI3-203ENST00000437480 BAZ1AQ9NRL2 1556 aaPredicted RBP41.97■■■■■ 4.31
GLI3-203ENST00000437480 PEG3Q9GZU2 1588 aa41.77■■■■■ 4.28
GLI3-203ENST00000437480 LAMC3Q9Y6N6 1575 aa41.66■■■■■ 4.26
GLI3-203ENST00000437480 THOC2Q8NI27 1593 aaKnown RBP41.61■■■■■ 4.25
GLI3-203ENST00000437480 MROH2BQ7Z745 1585 aa41.59■■■■■ 4.25
GLI3-203ENST00000437480 PDS5BQ9NTI5 1447 aa41.56■■■■■ 4.24
GLI3-203ENST00000437480 CADPSQ9ULU8 1353 aa41.34■■■■■ 4.21
GLI3-203ENST00000437480 KIF21AQ7Z4S6 1674 aa41.31■■■■■ 4.2
GLI3-203ENST00000437480 MRC2Q9UBG0 1479 aa41.16■■■■■ 4.18
GLI3-203ENST00000437480 WDR62O43379 1518 aa41.03■■■■■ 4.16
GLI3-203ENST00000437480 TRIM41Q8WV44 630 aa41.01■■■■■ 4.16
GLI3-203ENST00000437480 WIZO95785 1651 aa40.98■■■■■ 4.15
GLI3-203ENST00000437480 CEP164Q9UPV0 1460 aa40.92■■■■■ 4.14
GLI3-203ENST00000437480 FANCD2Q9BXW9 1451 aa40.83■■■■■ 4.13
GLI3-203ENST00000437480 CFTRP13569 1480 aa40.73■■■■■ 4.11
GLI3-203ENST00000437480 RSF1Q96T23 1441 aaPredicted RBP40.63■■■■■ 4.09
GLI3-203ENST00000437480 OSCARQ8IYS5 282 aa40.6■■■■■ 4.09
GLI3-203ENST00000437480 TOP2AP11388 1531 aaKnown RBP40.53■■■■■ 4.08
GLI3-203ENST00000437480 URB2Q14146 1524 aaKnown RBP40.47■■■■■ 4.07
GLI3-203ENST00000437480 IFT140Q96RY7 1462 aa40.14■■■■■ 4.02
GLI3-203ENST00000437480 CCDC88BA6NC98 1476 aa40.1■■■■■ 4.01
GLI3-203ENST00000437480 ZNF608Q9ULD9 1512 aaPredicted RBP40.05■■■■■ 4
GLI3-203ENST00000437480 PRDM2Q13029 1718 aa40■■■■□ 3.99
GLI3-203ENST00000437480 TOPBP1Q92547 1522 aa39.97■■■■□ 3.99
GLI3-203ENST00000437480 ABCC8Q09428 1581 aa39.93■■■■□ 3.98
GLI3-203ENST00000437480 RIMBP3CA6NJZ7 1639 aa39.92■■■■□ 3.98
GLI3-203ENST00000437480 RIMBP3BA6NNM3 1639 aa39.92■■■■□ 3.98
GLI3-203ENST00000437480 RIMBP3Q9UFD9 1639 aa39.92■■■■□ 3.98
GLI3-203ENST00000437480 ARHGEF11O15085 1522 aa39.83■■■■□ 3.97
GLI3-203ENST00000437480 DNMBPQ6XZF7 1577 aa39.77■■■■□ 3.96
GLI3-203ENST00000437480 EIF4G3O43432 1585 aaKnown RBP39.75■■■■□ 3.95
GLI3-203ENST00000437480 CYB5RLQ6IPT4 315 aa39.67■■■■□ 3.94
GLI3-203ENST00000437480 AQRO60306 1485 aaKnown RBP eCLIP39.67■■■■□ 3.94
GLI3-203ENST00000437480 FBLN2P98095 1184 aa39.6■■■■□ 3.93
GLI3-203ENST00000437480 TARBP1Q13395 1621 aaKnown RBP39.56■■■■□ 3.92
GLI3-203ENST00000437480 POLA1P09884 1462 aaPredicted RBP39.55■■■■□ 3.92
GLI3-203ENST00000437480 CHD1O14646 1710 aa39.43■■■■□ 3.9
GLI3-203ENST00000437480 SOGA1O94964 1423 aa39.42■■■■□ 3.9
GLI3-203ENST00000437480 TRHP20396 242 aaPredicted RBP39.41■■■■□ 3.9
GLI3-203ENST00000437480 ARAP1Q96P48 1450 aa39.41■■■■□ 3.9
GLI3-203ENST00000437480 RAD54L2Q9Y4B4 1467 aa39.41■■■■□ 3.9
GLI3-203ENST00000437480 TDRD9Q8NDG6 1382 aaKnown RBP39.39■■■■□ 3.9
GLI3-203ENST00000437480 SNAPC4Q5SXM2 1469 aa39.25■■■■□ 3.87
GLI3-203ENST00000437480 CHMP7Q8WUX9 453 aaPredicted RBP39.25■■■■□ 3.87
GLI3-203ENST00000437480 FGD5Q6ZNL6 1462 aa39.24■■■■□ 3.87
GLI3-203ENST00000437480 WDR97A6NE52 1622 aa39.2■■■■□ 3.87
GLI3-203ENST00000437480 MAGI1Q96QZ7 1491 aaPredicted RBP39.15■■■■□ 3.86
GLI3-203ENST00000437480 GRIN2BQ13224 1484 aa39.12■■■■□ 3.85
GLI3-203ENST00000437480 CUX1P39880 1505 aa39.09■■■■□ 3.85
GLI3-203ENST00000437480 CLASP1Q7Z460 1538 aa39.09■■■■□ 3.85
GLI3-203ENST00000437480 SYNJ1O43426 1573 aa39.09■■■■□ 3.85
GLI3-203ENST00000437480 SYNJ2O15056 1496 aa39.03■■■■□ 3.84
GLI3-203ENST00000437480 GAPVD1Q14C86 1478 aa38.91■■■■□ 3.82
GLI3-203ENST00000437480 ABCA10Q8WWZ4 1543 aa38.79■■■■□ 3.8
GLI3-203ENST00000437480 PBRM1Q86U86 1689 aa38.71■■■■□ 3.79
GLI3-203ENST00000437480 ABCA5Q8WWZ7 1642 aa38.67■■■■□ 3.78
GLI3-203ENST00000437480 AEBP2Q6ZN18 517 aaPredicted RBP38.61■■■■□ 3.77
GLI3-203ENST00000437480 WRNQ14191 1432 aaPredicted RBP eCLIP38.61■■■■□ 3.77
GLI3-203ENST00000437480 SUPT5HO00267 1087 aaKnown RBP38.58■■■■□ 3.77
GLI3-203ENST00000437480 GRIN2AQ12879 1464 aa38.58■■■■□ 3.77
GLI3-203ENST00000437480 NUP160Q12769 1436 aa38.48■■■■□ 3.75
GLI3-203ENST00000437480 ADAMTS12P58397 1594 aa38.44■■■■□ 3.74
GLI3-203ENST00000437480 FHAD1B1AJZ9 1412 aa38.43■■■■□ 3.74
GLI3-203ENST00000437480 ERCC6L2Q5T890 1561 aa38.42■■■■□ 3.74
GLI3-203ENST00000437480 CEP170Q5SW79 1584 aa38.39■■■■□ 3.74
GLI3-203ENST00000437480 TOP2BQ02880 1626 aa38.33■■■■□ 3.73
GLI3-203ENST00000437480 BIVM-ERCC5R4GMW8 1640 aa38.28■■■■□ 3.72
GLI3-203ENST00000437480 ERICH3Q5RHP9 1530 aa38.28■■■■□ 3.72
GLI3-203ENST00000437480 SHROOM2Q13796 1616 aa38.23■■■■□ 3.71
GLI3-203ENST00000437480 PRG4Q92954 1404 aaPredicted RBP38.18■■■■□ 3.7
GLI3-203ENST00000437480 JPH4Q96JJ6 628 aa38.16■■■■□ 3.7
GLI3-203ENST00000437480 NPM1P06748 294 aaKnown RBP eCLIP38■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms