RNA–Protein interactions for RNA: ENST00000258829.5

NKX2-8-201, Transcript of NK2 homeobox 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-8, Length 1,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8-201ENST00000258829 NISCHQ9Y2I1 1504 aa55.93■■■■■ 6.54
NKX2-8-201ENST00000258829 CCDC180Q9P1Z9 1646 aa49.71■■■■■ 5.55
NKX2-8-201ENST00000258829 ABCC9O60706 1549 aa48.37■■■■■ 5.33
NKX2-8-201ENST00000258829 ZCCHC6Q5VYS8 1495 aaKnown RBP46.66■■■■■ 5.06
NKX2-8-201ENST00000258829 RB1CC1Q8TDY2 1594 aa46.65■■■■■ 5.06
NKX2-8-201ENST00000258829 NACADO15069 1562 aa46.64■■■■■ 5.06
NKX2-8-201ENST00000258829 DCAF8L2P0C7V8 631 aa46.55■■■■■ 5.04
NKX2-8-201ENST00000258829 MYO15BQ96JP2 1530 aa46.42■■■■■ 5.02
NKX2-8-201ENST00000258829 DCAF1Q9Y4B6 1507 aa46.3■■■■■ 5
NKX2-8-201ENST00000258829 UNC13AQ9UPW8 1703 aa45.62■■■■■ 4.89
NKX2-8-201ENST00000258829 SCRIBQ14160 1630 aa45.35■■■■■ 4.85
NKX2-8-201ENST00000258829 DNAJC5BQ9UF47 199 aa45.24■■■■■ 4.83
NKX2-8-201ENST00000258829 BICRAQ9NZM4 1560 aa45.23■■■■■ 4.83
NKX2-8-201ENST00000258829 PABPN1Q86U42 306 aaKnown RBP eCLIP45.18■■■■■ 4.82
NKX2-8-201ENST00000258829 SHROOM4Q9ULL8 1493 aa44.79■■■■■ 4.76
NKX2-8-201ENST00000258829 EIF4G1Q04637 1599 aaKnown RBP44.01■■■■■ 4.64
NKX2-8-201ENST00000258829 CC2D2AQ9P2K1 1620 aa43.79■■■■■ 4.6
NKX2-8-201ENST00000258829 CECR2Q9BXF3 1484 aa43.53■■■■■ 4.56
NKX2-8-201ENST00000258829 SMARCA4P51532 1647 aa43.39■■■■■ 4.54
NKX2-8-201ENST00000258829 BAZ1AQ9NRL2 1556 aaPredicted RBP43.36■■■■■ 4.53
NKX2-8-201ENST00000258829 MROH2BQ7Z745 1585 aa43.11■■■■■ 4.49
NKX2-8-201ENST00000258829 ATAD2BQ9ULI0 1458 aa43.06■■■■■ 4.48
NKX2-8-201ENST00000258829 SMARCA2P51531 1590 aa43.05■■■■■ 4.48
NKX2-8-201ENST00000258829 NCAPD3P42695 1498 aa43■■■■■ 4.47
NKX2-8-201ENST00000258829 PEG3Q9GZU2 1588 aa42.95■■■■■ 4.47
NKX2-8-201ENST00000258829 HMGXB3Q12766 1538 aa42.87■■■■■ 4.45
NKX2-8-201ENST00000258829 BAZ1BQ9UIG0 1483 aaKnown RBP42.74■■■■■ 4.43
NKX2-8-201ENST00000258829 WIZO95785 1651 aa42.67■■■■■ 4.42
NKX2-8-201ENST00000258829 RSF1Q96T23 1441 aaPredicted RBP42.67■■■■■ 4.42
NKX2-8-201ENST00000258829 TOP2AP11388 1531 aaKnown RBP42.25■■■■■ 4.35
NKX2-8-201ENST00000258829 DNAJC5Q9H3Z4 198 aa42.08■■■■■ 4.33
NKX2-8-201ENST00000258829 NESP48681 1621 aa41.92■■■■■ 4.3
NKX2-8-201ENST00000258829 LAMC3Q9Y6N6 1575 aa41.88■■■■■ 4.29
NKX2-8-201ENST00000258829 CADPSQ9ULU8 1353 aa41.74■■■■■ 4.27
NKX2-8-201ENST00000258829 CCDC88BA6NC98 1476 aa41.7■■■■■ 4.27
NKX2-8-201ENST00000258829 ERCC6Q03468 1493 aa41.69■■■■■ 4.26
NKX2-8-201ENST00000258829 SUPT5HO00267 1087 aaKnown RBP41.69■■■■■ 4.26
NKX2-8-201ENST00000258829 CFTRP13569 1480 aa41.56■■■■■ 4.24
NKX2-8-201ENST00000258829 PDS5BQ9NTI5 1447 aa41.54■■■■■ 4.24
NKX2-8-201ENST00000258829 KIF21AQ7Z4S6 1674 aa41.49■■■■■ 4.23
NKX2-8-201ENST00000258829 PRDM2Q13029 1718 aa41.35■■■■■ 4.21
NKX2-8-201ENST00000258829 FANCD2Q9BXW9 1451 aa41.3■■■■■ 4.2
NKX2-8-201ENST00000258829 THOC2Q8NI27 1593 aaKnown RBP41.29■■■■■ 4.2
NKX2-8-201ENST00000258829 CEP164Q9UPV0 1460 aa41.25■■■■■ 4.19
NKX2-8-201ENST00000258829 CUX2O14529 1486 aa41.18■■■■■ 4.18
NKX2-8-201ENST00000258829 MRC2Q9UBG0 1479 aa41.15■■■■■ 4.18
NKX2-8-201ENST00000258829 WDR62O43379 1518 aa41.01■■■■■ 4.16
NKX2-8-201ENST00000258829 URB2Q14146 1524 aaKnown RBP40.88■■■■■ 4.14
NKX2-8-201ENST00000258829 TOPBP1Q92547 1522 aa40.67■■■■■ 4.1
NKX2-8-201ENST00000258829 ABCC8Q09428 1581 aa40.66■■■■■ 4.1
NKX2-8-201ENST00000258829 DNMBPQ6XZF7 1577 aa40.66■■■■■ 4.1
NKX2-8-201ENST00000258829 CUX1P39880 1505 aa40.45■■■■■ 4.07
NKX2-8-201ENST00000258829 IFT140Q96RY7 1462 aa40.36■■■■■ 4.05
NKX2-8-201ENST00000258829 POLA1P09884 1462 aaPredicted RBP40.33■■■■■ 4.05
NKX2-8-201ENST00000258829 FGD5Q6ZNL6 1462 aa40.27■■■■■ 4.04
NKX2-8-201ENST00000258829 WRNQ14191 1432 aaPredicted RBP eCLIP40.25■■■■■ 4.03
NKX2-8-201ENST00000258829 TARBP1Q13395 1621 aaKnown RBP40.23■■■■■ 4.03
NKX2-8-201ENST00000258829 BIVM-ERCC5R4GMW8 1640 aa40.18■■■■■ 4.02
NKX2-8-201ENST00000258829 SYNJ1O43426 1573 aa40.17■■■■■ 4.02
NKX2-8-201ENST00000258829 TOP2BQ02880 1626 aa40.16■■■■■ 4.02
NKX2-8-201ENST00000258829 ZNF608Q9ULD9 1512 aaPredicted RBP40.15■■■■■ 4.02
NKX2-8-201ENST00000258829 SOGA1O94964 1423 aa40.14■■■■■ 4.02
NKX2-8-201ENST00000258829 RAD54L2Q9Y4B4 1467 aa40.13■■■■■ 4.02
NKX2-8-201ENST00000258829 EIF4G3O43432 1585 aaKnown RBP40.06■■■■■ 4
NKX2-8-201ENST00000258829 WDR97A6NE52 1622 aa39.98■■■■□ 3.99
NKX2-8-201ENST00000258829 TRIM41Q8WV44 630 aa39.96■■■■□ 3.99
NKX2-8-201ENST00000258829 AQRO60306 1485 aaKnown RBP eCLIP39.93■■■■□ 3.98
NKX2-8-201ENST00000258829 ABCA10Q8WWZ4 1543 aa39.89■■■■□ 3.98
NKX2-8-201ENST00000258829 TDRD9Q8NDG6 1382 aaKnown RBP39.88■■■■□ 3.97
NKX2-8-201ENST00000258829 ABCA5Q8WWZ7 1642 aa39.76■■■■□ 3.95
NKX2-8-201ENST00000258829 GAPVD1Q14C86 1478 aa39.7■■■■□ 3.95
NKX2-8-201ENST00000258829 PBRM1Q86U86 1689 aa39.68■■■■□ 3.94
NKX2-8-201ENST00000258829 GRIN2BQ13224 1484 aa39.68■■■■□ 3.94
NKX2-8-201ENST00000258829 SNAPC4Q5SXM2 1469 aa39.61■■■■□ 3.93
NKX2-8-201ENST00000258829 MAGI1Q96QZ7 1491 aaPredicted RBP39.56■■■■□ 3.92
NKX2-8-201ENST00000258829 CHD1O14646 1710 aa39.51■■■■□ 3.92
NKX2-8-201ENST00000258829 OSCARQ8IYS5 282 aa39.43■■■■□ 3.9
NKX2-8-201ENST00000258829 ERICH3Q5RHP9 1530 aa39.43■■■■□ 3.9
NKX2-8-201ENST00000258829 SYNJ2O15056 1496 aa39.4■■■■□ 3.9
NKX2-8-201ENST00000258829 FBLN2P98095 1184 aa39.38■■■■□ 3.89
NKX2-8-201ENST00000258829 KIF27Q86VH2 1401 aa39.38■■■■□ 3.89
NKX2-8-201ENST00000258829 ADAMTS12P58397 1594 aa39.37■■■■□ 3.89
NKX2-8-201ENST00000258829 CHMP7Q8WUX9 453 aaPredicted RBP39.3■■■■□ 3.88
NKX2-8-201ENST00000258829 FHAD1B1AJZ9 1412 aa39.25■■■■□ 3.87
NKX2-8-201ENST00000258829 GRIN2AQ12879 1464 aa39.18■■■■□ 3.86
NKX2-8-201ENST00000258829 IGF1RP08069 1367 aa39.15■■■■□ 3.86
NKX2-8-201ENST00000258829 CUL7Q14999 1698 aa39.15■■■■□ 3.86
NKX2-8-201ENST00000258829 CLASP1Q7Z460 1538 aa39.08■■■■□ 3.85
NKX2-8-201ENST00000258829 RUSC2Q8N2Y8 1516 aa39.06■■■■□ 3.84
NKX2-8-201ENST00000258829 CHIC1Q5VXU3 224 aa39.02■■■■□ 3.84
NKX2-8-201ENST00000258829 CEP170Q5SW79 1584 aa38.99■■■■□ 3.83
NKX2-8-201ENST00000258829 NUP160Q12769 1436 aa38.98■■■■□ 3.83
NKX2-8-201ENST00000258829 CARMIL1Q5VZK9 1371 aa38.95■■■■□ 3.83
NKX2-8-201ENST00000258829 RIMBP3CA6NJZ7 1639 aa38.88■■■■□ 3.81
NKX2-8-201ENST00000258829 RIMBP3BA6NNM3 1639 aa38.88■■■■□ 3.81
NKX2-8-201ENST00000258829 RIMBP3Q9UFD9 1639 aa38.88■■■■□ 3.81
NKX2-8-201ENST00000258829 ARHGEF11O15085 1522 aa38.88■■■■□ 3.81
NKX2-8-201ENST00000258829 EEA1Q15075 1411 aa38.77■■■■□ 3.8
NKX2-8-201ENST00000258829 RAPGEF2Q9Y4G8 1499 aa38.77■■■■□ 3.8
NKX2-8-201ENST00000258829 SHROOM2Q13796 1616 aa38.71■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms