RNA–Protein interactions for RNA: ENST00000554407.5

AP001267.3-203, humanhuman

TSL 2 BASIC

Gene AP001267.3, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001267.3-203ENST00000554407 NISCHQ9Y2I1 1504 aa57.26■■■■■ 6.76
AP001267.3-203ENST00000554407 CCDC180Q9P1Z9 1646 aa51.24■■■■■ 5.79
AP001267.3-203ENST00000554407 ABCC9O60706 1549 aa50.56■■■■■ 5.68
AP001267.3-203ENST00000554407 RB1CC1Q8TDY2 1594 aa48.43■■■■■ 5.34
AP001267.3-203ENST00000554407 NACADO15069 1562 aa48.23■■■■■ 5.31
AP001267.3-203ENST00000554407 DCAF8L2P0C7V8 631 aa47.86■■■■■ 5.25
AP001267.3-203ENST00000554407 MYO15BQ96JP2 1530 aa47.79■■■■■ 5.24
AP001267.3-203ENST00000554407 ZCCHC6Q5VYS8 1495 aaKnown RBP47.62■■■■■ 5.21
AP001267.3-203ENST00000554407 UNC13AQ9UPW8 1703 aa47.45■■■■■ 5.19
AP001267.3-203ENST00000554407 DCAF1Q9Y4B6 1507 aa47.38■■■■■ 5.18
AP001267.3-203ENST00000554407 PABPN1Q86U42 306 aaKnown RBP eCLIP47.07■■■■■ 5.13
AP001267.3-203ENST00000554407 BICRAQ9NZM4 1560 aa47.04■■■■■ 5.12
AP001267.3-203ENST00000554407 DNAJC5BQ9UF47 199 aa46.87■■■■■ 5.09
AP001267.3-203ENST00000554407 SCRIBQ14160 1630 aa46.65■■■■■ 5.06
AP001267.3-203ENST00000554407 SHROOM4Q9ULL8 1493 aa46.48■■■■■ 5.03
AP001267.3-203ENST00000554407 EIF4G1Q04637 1599 aaKnown RBP45.81■■■■■ 4.92
AP001267.3-203ENST00000554407 CC2D2AQ9P2K1 1620 aa45.76■■■■■ 4.92
AP001267.3-203ENST00000554407 CECR2Q9BXF3 1484 aa45.49■■■■■ 4.87
AP001267.3-203ENST00000554407 SMARCA4P51532 1647 aa44.6■■■■■ 4.73
AP001267.3-203ENST00000554407 NCAPD3P42695 1498 aa44.49■■■■■ 4.71
AP001267.3-203ENST00000554407 ATAD2BQ9ULI0 1458 aa44.44■■■■■ 4.7
AP001267.3-203ENST00000554407 BAZ1AQ9NRL2 1556 aaPredicted RBP44.43■■■■■ 4.7
AP001267.3-203ENST00000554407 SMARCA2P51531 1590 aa44.37■■■■■ 4.69
AP001267.3-203ENST00000554407 HMGXB3Q12766 1538 aa44.28■■■■■ 4.68
AP001267.3-203ENST00000554407 PEG3Q9GZU2 1588 aa44.18■■■■■ 4.66
AP001267.3-203ENST00000554407 MROH2BQ7Z745 1585 aa44.13■■■■■ 4.65
AP001267.3-203ENST00000554407 BAZ1BQ9UIG0 1483 aaKnown RBP44.03■■■■■ 4.64
AP001267.3-203ENST00000554407 WIZO95785 1651 aa43.65■■■■■ 4.58
AP001267.3-203ENST00000554407 NESP48681 1621 aa43.62■■■■■ 4.57
AP001267.3-203ENST00000554407 ERCC6Q03468 1493 aa43.59■■■■■ 4.57
AP001267.3-203ENST00000554407 LAMC3Q9Y6N6 1575 aa43.45■■■■■ 4.55
AP001267.3-203ENST00000554407 CUX2O14529 1486 aa43.39■■■■■ 4.54
AP001267.3-203ENST00000554407 RSF1Q96T23 1441 aaPredicted RBP43.39■■■■■ 4.54
AP001267.3-203ENST00000554407 KIF21AQ7Z4S6 1674 aa43.16■■■■■ 4.5
AP001267.3-203ENST00000554407 THOC2Q8NI27 1593 aaKnown RBP43.16■■■■■ 4.5
AP001267.3-203ENST00000554407 TOP2AP11388 1531 aaKnown RBP43.15■■■■■ 4.5
AP001267.3-203ENST00000554407 CADPSQ9ULU8 1353 aa43.13■■■■■ 4.49
AP001267.3-203ENST00000554407 PDS5BQ9NTI5 1447 aa43.09■■■■■ 4.49
AP001267.3-203ENST00000554407 CFTRP13569 1480 aa42.8■■■■■ 4.44
AP001267.3-203ENST00000554407 MRC2Q9UBG0 1479 aa42.74■■■■■ 4.43
AP001267.3-203ENST00000554407 CEP164Q9UPV0 1460 aa42.68■■■■■ 4.42
AP001267.3-203ENST00000554407 FANCD2Q9BXW9 1451 aa42.67■■■■■ 4.42
AP001267.3-203ENST00000554407 WDR62O43379 1518 aa42.66■■■■■ 4.42
AP001267.3-203ENST00000554407 DNAJC5Q9H3Z4 198 aa42.62■■■■■ 4.41
AP001267.3-203ENST00000554407 CCDC88BA6NC98 1476 aa42.59■■■■■ 4.41
AP001267.3-203ENST00000554407 PRDM2Q13029 1718 aa42.57■■■■■ 4.41
AP001267.3-203ENST00000554407 URB2Q14146 1524 aaKnown RBP42.31■■■■■ 4.36
AP001267.3-203ENST00000554407 TOPBP1Q92547 1522 aa41.95■■■■■ 4.31
AP001267.3-203ENST00000554407 DNMBPQ6XZF7 1577 aa41.88■■■■■ 4.29
AP001267.3-203ENST00000554407 ABCC8Q09428 1581 aa41.87■■■■■ 4.29
AP001267.3-203ENST00000554407 IFT140Q96RY7 1462 aa41.79■■■■■ 4.28
AP001267.3-203ENST00000554407 SUPT5HO00267 1087 aaKnown RBP41.74■■■■■ 4.27
AP001267.3-203ENST00000554407 ZNF608Q9ULD9 1512 aaPredicted RBP41.68■■■■■ 4.26
AP001267.3-203ENST00000554407 TARBP1Q13395 1621 aaKnown RBP41.58■■■■■ 4.25
AP001267.3-203ENST00000554407 POLA1P09884 1462 aaPredicted RBP41.55■■■■■ 4.24
AP001267.3-203ENST00000554407 EIF4G3O43432 1585 aaKnown RBP41.54■■■■■ 4.24
AP001267.3-203ENST00000554407 CUX1P39880 1505 aa41.44■■■■■ 4.23
AP001267.3-203ENST00000554407 FGD5Q6ZNL6 1462 aa41.37■■■■■ 4.21
AP001267.3-203ENST00000554407 OSCARQ8IYS5 282 aa41.37■■■■■ 4.21
AP001267.3-203ENST00000554407 RAD54L2Q9Y4B4 1467 aa41.35■■■■■ 4.21
AP001267.3-203ENST00000554407 AQRO60306 1485 aaKnown RBP eCLIP41.33■■■■■ 4.21
AP001267.3-203ENST00000554407 SOGA1O94964 1423 aa41.3■■■■■ 4.2
AP001267.3-203ENST00000554407 WDR97A6NE52 1622 aa41.22■■■■■ 4.19
AP001267.3-203ENST00000554407 CHD1O14646 1710 aa41.15■■■■■ 4.18
AP001267.3-203ENST00000554407 TDRD9Q8NDG6 1382 aaKnown RBP41.13■■■■■ 4.18
AP001267.3-203ENST00000554407 BIVM-ERCC5R4GMW8 1640 aa40.98■■■■■ 4.15
AP001267.3-203ENST00000554407 SNAPC4Q5SXM2 1469 aa40.97■■■■■ 4.15
AP001267.3-203ENST00000554407 TOP2BQ02880 1626 aa40.95■■■■■ 4.15
AP001267.3-203ENST00000554407 ABCA10Q8WWZ4 1543 aa40.94■■■■■ 4.14
AP001267.3-203ENST00000554407 TRIM41Q8WV44 630 aa40.94■■■■■ 4.14
AP001267.3-203ENST00000554407 RIMBP3CA6NJZ7 1639 aa40.93■■■■■ 4.14
AP001267.3-203ENST00000554407 RIMBP3BA6NNM3 1639 aa40.93■■■■■ 4.14
AP001267.3-203ENST00000554407 RIMBP3Q9UFD9 1639 aa40.93■■■■■ 4.14
AP001267.3-203ENST00000554407 GRIN2BQ13224 1484 aa40.93■■■■■ 4.14
AP001267.3-203ENST00000554407 PBRM1Q86U86 1689 aa40.91■■■■■ 4.14
AP001267.3-203ENST00000554407 SYNJ1O43426 1573 aa40.91■■■■■ 4.14
AP001267.3-203ENST00000554407 WRNQ14191 1432 aaPredicted RBP eCLIP40.91■■■■■ 4.14
AP001267.3-203ENST00000554407 MAGI1Q96QZ7 1491 aaPredicted RBP40.9■■■■■ 4.14
AP001267.3-203ENST00000554407 ABCA5Q8WWZ7 1642 aa40.89■■■■■ 4.14
AP001267.3-203ENST00000554407 GAPVD1Q14C86 1478 aa40.85■■■■■ 4.13
AP001267.3-203ENST00000554407 FBLN2P98095 1184 aa40.84■■■■■ 4.13
AP001267.3-203ENST00000554407 ARHGEF11O15085 1522 aa40.83■■■■■ 4.13
AP001267.3-203ENST00000554407 SYNJ2O15056 1496 aa40.74■■■■■ 4.11
AP001267.3-203ENST00000554407 CLASP1Q7Z460 1538 aa40.67■■■■■ 4.1
AP001267.3-203ENST00000554407 CHMP7Q8WUX9 453 aaPredicted RBP40.66■■■■■ 4.1
AP001267.3-203ENST00000554407 ADAMTS12P58397 1594 aa40.54■■■■■ 4.08
AP001267.3-203ENST00000554407 ARAP1Q96P48 1450 aa40.48■■■■■ 4.07
AP001267.3-203ENST00000554407 ERICH3Q5RHP9 1530 aa40.45■■■■■ 4.07
AP001267.3-203ENST00000554407 GRIN2AQ12879 1464 aa40.42■■■■■ 4.06
AP001267.3-203ENST00000554407 FHAD1B1AJZ9 1412 aa40.36■■■■■ 4.05
AP001267.3-203ENST00000554407 CYB5RLQ6IPT4 315 aa40.34■■■■■ 4.05
AP001267.3-203ENST00000554407 CEP170Q5SW79 1584 aa40.29■■■■■ 4.04
AP001267.3-203ENST00000554407 NUP160Q12769 1436 aa40.27■■■■■ 4.04
AP001267.3-203ENST00000554407 SHROOM2Q13796 1616 aa40.1■■■■■ 4.01
AP001267.3-203ENST00000554407 KIF27Q86VH2 1401 aa40.08■■■■■ 4.01
AP001267.3-203ENST00000554407 ERCC6L2Q5T890 1561 aa40.05■■■■■ 4
AP001267.3-203ENST00000554407 CUL7Q14999 1698 aa40.01■■■■■ 4
AP001267.3-203ENST00000554407 IGF1RP08069 1367 aa39.97■■■■□ 3.99
AP001267.3-203ENST00000554407 RUSC2Q8N2Y8 1516 aa39.96■■■■□ 3.99
AP001267.3-203ENST00000554407 PRG4Q92954 1404 aaPredicted RBP39.78■■■■□ 3.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms