Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 KANSL1-211ENST00000575318 4935 ntTSL 5 BASIC13.1□□□□□ -0.311e-6■■■□□ 17.2
MATR3P43243 KANSL1-217ENST00000638269 3365 ntTSL 511.45□□□□□ -0.581e-6■■■□□ 17.2
MATR3P43243 KANSL1-205ENST00000572904 4973 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.71e-6■■■□□ 17.2
MATR3P43243 KANSL1-226ENST00000639375 3392 ntTSL 59.38□□□□□ -0.911e-6■■■□□ 17.2
MATR3P43243 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.7■□□□□ 0.744e-7■■■□□ 17.2
MATR3P43243 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.63■□□□□ 0.734e-7■■■□□ 17.2
MATR3P43243 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.62■□□□□ 0.734e-7■■■□□ 17.2
MATR3P43243 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.644e-7■■■□□ 17.2
MATR3P43243 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.03■□□□□ 0.644e-7■■■□□ 17.2
MATR3P43243 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.574e-7■■■□□ 17.2
MATR3P43243 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.24e-7■■■□□ 17.2
MATR3P43243 ZNF133-215ENST00000630056 1999 ntTSL 2 BASIC13.07□□□□□ -0.324e-7■■■□□ 17.2
MATR3P43243 ZNF133-214ENST00000628216 2318 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.484e-7■■■□□ 17.2
MATR3P43243 ZNF133-213ENST00000626025 616 ntTSL 511.13□□□□□ -0.634e-7■■■□□ 17.2
MATR3P43243 ZNF133-208ENST00000434018 523 ntTSL 310.23□□□□□ -0.774e-7■■■□□ 17.2
MATR3P43243 ZNF133-202ENST00000360010 481 ntTSL 59.23□□□□□ -0.934e-7■■■□□ 17.2
MATR3P43243 LRMDA-209ENST00000593699 1124 ntTSL 1 (best)12.01□□□□□ -0.492e-6■■■□□ 17.2
MATR3P43243 CHD1L-209ENST00000492728 662 ntTSL 220.11■□□□□ 0.811e-6■■■□□ 17.2
MATR3P43243 AL137230.2-201ENST00000555070 452 ntTSL 3 BASIC9.69□□□□□ -0.864e-7■■■□□ 17.2
MATR3P43243 LPP-207ENST00000443217 400 ntTSL 315.4■□□□□ 0.061e-6■■■□□ 17.2
MATR3P43243 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.457e-7■■■□□ 17.2
MATR3P43243 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.73□□□□□ -1.497e-7■■■□□ 17.2
MATR3P43243 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.04□□□□□ -1.67e-7■■■□□ 17.2
MATR3P43243 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.19□□□□□ -1.747e-7■■■□□ 17.2
MATR3P43243 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC7.32□□□□□ -1.241e-8■■■□□ 17.1
MATR3P43243 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.5□□□□□ -1.534e-6■■■□□ 17.1
MATR3P43243 HMBOX1-209ENST00000522468 817 ntTSL 315.28■□□□□ 0.047e-7■■■□□ 17.1
MATR3P43243 FCHSD2-206ENST00000422375 587 ntTSL 413.17□□□□□ -0.31e-6■■■□□ 17.1
MATR3P43243 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.29□□□□□ -2.046e-7■■■□□ 17.1
MATR3P43243 ABCD3-204ENST00000468860 661 ntTSL 319.79■□□□□ 0.766e-7■■■□□ 17.1
MATR3P43243 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC13.25□□□□□ -0.296e-7■■■□□ 17.1
MATR3P43243 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.49■■□□□ 1.992e-6■■■□□ 17.1
MATR3P43243 HSD17B12-212ENST00000636722 540 ntTSL 421.77■■□□□ 1.082e-6■■■□□ 17.1
MATR3P43243 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.155e-6■■■□□ 17.1
MATR3P43243 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.175e-6■■■□□ 17.1
MATR3P43243 SHPRH-206ENST00000438092 6994 ntTSL 1 (best) BASIC12.36□□□□□ -0.435e-6■■■□□ 17.1
MATR3P43243 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.95e-6■■■□□ 17.1
MATR3P43243 ACSS3-204ENST00000548324 2214 ntTSL 29.47□□□□□ -0.899e-7■■■□□ 17.1
MATR3P43243 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.15□□□□□ -1.911e-6■■■□□ 17.1
MATR3P43243 MMS22L-209ENST00000509383 3083 ntTSL 1 (best)10.87□□□□□ -0.678e-7■■■□□ 17.1
MATR3P43243 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.29□□□□□ -1.728e-7■■■□□ 17.1
MATR3P43243 MMS22L-210ENST00000510018 966 ntTSL 54.19□□□□□ -1.748e-7■■■□□ 17.1
MATR3P43243 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.519e-7■■■□□ 17.1
MATR3P43243 MALRD1-201ENST00000377265 1761 ntTSL 27.42□□□□□ -1.229e-7■■■□□ 17.1
MATR3P43243 VPS37A-203ENST00000518038 655 ntTSL 319.58■□□□□ 0.723e-6■■■□□ 17.1
MATR3P43243 VPS37A-204ENST00000519381 575 ntTSL 417.4■□□□□ 0.383e-6■■■□□ 17.1
MATR3P43243 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.54■□□□□ 0.241e-6■■■□□ 17.1
MATR3P43243 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.241e-6■■■□□ 17.1
MATR3P43243 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.241e-6■■■□□ 17.1
MATR3P43243 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.16■□□□□ 0.181e-6■■■□□ 17.1
MATR3P43243 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC16.01■□□□□ 0.151e-6■■■□□ 17.1
MATR3P43243 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC14.78□□□□□ -0.041e-6■■■□□ 17.1
MATR3P43243 RPS6KC1-204ENST00000490299 5154 ntTSL 1 (best)4.2□□□□□ -1.741e-6■■■□□ 17.1
MATR3P43243 PDLIM5-206ENST00000437932 5713 ntTSL 5 BASIC13.33□□□□□ -0.281e-6■■■□□ 17.1
MATR3P43243 PDLIM5-207ENST00000503974 2081 ntTSL 2 BASIC10.45□□□□□ -0.741e-6■■■□□ 17.1
MATR3P43243 PDLIM5-223ENST00000627587 1853 ntTSL 210.27□□□□□ -0.761e-6■■■□□ 17.1
MATR3P43243 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC10.21□□□□□ -0.781e-6■■■□□ 17.1
MATR3P43243 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.821e-6■■■□□ 17.1
MATR3P43243 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.021e-6■■■□□ 17.1
MATR3P43243 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC8.27□□□□□ -1.091e-6■■■□□ 17.1
MATR3P43243 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.072e-6■■■□□ 17.1
MATR3P43243 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.312e-6■■■□□ 17.1
MATR3P43243 LANCL1-206ENST00000448951 808 ntTSL 312.71□□□□□ -0.372e-6■■■□□ 17.1
MATR3P43243 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.742e-6■■■□□ 17.1
MATR3P43243 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.892e-6■■■□□ 17.1
MATR3P43243 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.52e-6■■■□□ 17.1
MATR3P43243 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.828e-7■■■□□ 17.1
MATR3P43243 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.858e-7■■■□□ 17
MATR3P43243 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.68e-7■■■□□ 17
MATR3P43243 ABO-201ENST00000453660 6341 ntTSL 1 (best)15.68■□□□□ 0.18e-7■■■□□ 17
MATR3P43243 MIR4713HG-201ENST00000559909 561 ntTSL 4 BASIC12.66□□□□□ -0.383e-7■■■□□ 17
MATR3P43243 CLEC2D-209ENST00000476198 981 ntTSL 57.26□□□□□ -1.251e-6■■■□□ 17
MATR3P43243 ADIPOR2-205ENST00000540974 480 ntTSL 315.22■□□□□ 0.035e-7■■■□□ 17
MATR3P43243 CHN2-220ENST00000474070 754 ntTSL 510.02□□□□□ -0.817e-7■■■□□ 17
MATR3P43243 FOXP1-207ENST00000471386 299 ntTSL 1 (best)27.99■■■□□ 2.072e-6■■■□□ 17
MATR3P43243 FOXP1-217ENST00000498154 535 ntTSL 326.72■■□□□ 1.872e-6■■■□□ 17
MATR3P43243 C3orf35-207ENST00000466204 1398 ntTSL 1 (best)15.31■□□□□ 0.041e-6■■■□□ 17
MATR3P43243 C3orf35-208ENST00000481400 1495 ntTSL 1 (best)15.17■□□□□ 0.021e-6■■■□□ 17
MATR3P43243 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC13.39□□□□□ -0.271e-6■■■□□ 17
MATR3P43243 C3orf35-202ENST00000332506 1845 ntTSL 1 (best)12.91□□□□□ -0.341e-6■■■□□ 17
MATR3P43243 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.55■□□□□ 0.085e-10■■■□□ 17
MATR3P43243 TTC3-223ENST00000492275 769 ntTSL 328.21■■■□□ 2.117e-7■■■□□ 17
MATR3P43243 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.69■■□□□ 1.867e-7■■■□□ 17
MATR3P43243 TTC3-212ENST00000463216 842 ntTSL 526.35■■□□□ 1.817e-7■■■□□ 17
MATR3P43243 TTC3-224ENST00000494243 861 ntTSL 526.02■■□□□ 1.767e-7■■■□□ 17
MATR3P43243 TTC3-217ENST00000481605 1540 ntTSL 525.66■■□□□ 1.77e-7■■■□□ 17
MATR3P43243 TTC3-210ENST00000450533 2451 ntTSL 1 (best)24.5■■□□□ 1.517e-7■■■□□ 17
MATR3P43243 RASGRF2-205ENST00000514946 548 ntTSL 511.14□□□□□ -0.636e-7■■■□□ 17
MATR3P43243 USP15-205ENST00000546694 799 ntTSL 54.91□□□□□ -1.624e-7■■■□□ 17
MATR3P43243 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC8.99□□□□□ -0.971e-38■■■□□ 17
MATR3P43243 GMDS-210ENST00000533279 817 ntTSL 512.5□□□□□ -0.412e-6■■■□□ 17
MATR3P43243 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC22.32■■□□□ 1.161e-6■■■□□ 17
MATR3P43243 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC22.17■■□□□ 1.141e-6■■■□□ 17
MATR3P43243 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.91■□□□□ 0.941e-6■■■□□ 17
MATR3P43243 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.77■□□□□ 0.751e-6■■■□□ 17
MATR3P43243 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC10.4□□□□□ -0.741e-6■■■□□ 17
MATR3P43243 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC10.27□□□□□ -0.771e-6■■■□□ 17
MATR3P43243 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.781e-6■■■□□ 17
MATR3P43243 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC9.47□□□□□ -0.891e-6■■■□□ 17
MATR3P43243 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC9.26□□□□□ -0.931e-6■■■□□ 17
Retrieved 100 of 16,209 protein–RNA pairs in 90.7 ms