RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 AEBP2Q6ZN18 517 aaPredicted RBP26.78■■□□□ 1.88
SAMSN1-202ENST00000400564 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
SAMSN1-202ENST00000400564 SENP3Q9H4L4 574 aaPredicted RBP23.09■■□□□ 1.29
SAMSN1-202ENST00000400564 PHF23Q9BUL5 403 aaPredicted RBP22.62■■□□□ 1.21
SAMSN1-202ENST00000400564 FOXD1Q16676 465 aa21.47■■□□□ 1.03
SAMSN1-202ENST00000400564 POTEDQ86YR6 584 aa20.66■□□□□ 0.9
SAMSN1-202ENST00000400564 MSH5O43196 834 aa20.42■□□□□ 0.86
SAMSN1-202ENST00000400564 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
SAMSN1-202ENST00000400564 PLPPR3Q6T4P5 718 aa19.96■□□□□ 0.79
SAMSN1-202ENST00000400564 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
SAMSN1-202ENST00000400564 ADRA2BP18089 450 aa19.57■□□□□ 0.72
SAMSN1-202ENST00000400564 DMRT2Q9Y5R5 561 aa18.18■□□□□ 0.5
SAMSN1-202ENST00000400564 MAPK8IP2Q13387 824 aaPredicted RBP18.08■□□□□ 0.49
SAMSN1-202ENST00000400564 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.48
SAMSN1-202ENST00000400564 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
SAMSN1-202ENST00000400564 PPP4R3CPQ6ZMV5 832 aa17.63■□□□□ 0.41
SAMSN1-202ENST00000400564 DCAF8L1A6NGE4 600 aa17.52■□□□□ 0.39
SAMSN1-202ENST00000400564 HOXD11P31277 338 aaPredicted RBP17.3■□□□□ 0.36
SAMSN1-202ENST00000400564 RNF39Q9H2S5 420 aa17.29■□□□□ 0.36
SAMSN1-202ENST00000400564 KCNA4P22459 653 aa17.2■□□□□ 0.34
SAMSN1-202ENST00000400564 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
SAMSN1-202ENST00000400564 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
SAMSN1-202ENST00000400564 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
SAMSN1-202ENST00000400564 RNF216Q9NWF9 866 aaPredicted RBP17.07■□□□□ 0.32
SAMSN1-202ENST00000400564 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
SAMSN1-202ENST00000400564 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
SAMSN1-202ENST00000400564 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.242e-8■□□□□ 9.9
SAMSN1-202ENST00000400564 SLC4A1APQ9BWU0 796 aaKnown RBP16.33■□□□□ 0.2
SAMSN1-202ENST00000400564 POTEHQ6S545 545 aa16.13■□□□□ 0.17
SAMSN1-202ENST00000400564 U3KPZ7 1027 aaPredicted RBP16.08■□□□□ 0.16
SAMSN1-202ENST00000400564 CAPN15O75808 1086 aa16.05■□□□□ 0.16
SAMSN1-202ENST00000400564 DSG3P32926 999 aa16.01■□□□□ 0.15
SAMSN1-202ENST00000400564 SLC4A2P04920 1241 aa16■□□□□ 0.15
SAMSN1-202ENST00000400564 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
SAMSN1-202ENST00000400564 EHMT2Q96KQ7 1210 aa15.87■□□□□ 0.13
SAMSN1-202ENST00000400564 ZBTB22O15209 634 aa15.86■□□□□ 0.13
SAMSN1-202ENST00000400564 FOXD4L1Q9NU39 408 aa15.79■□□□□ 0.12
SAMSN1-202ENST00000400564 APLP2Q06481 763 aa15.78■□□□□ 0.12
SAMSN1-202ENST00000400564 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
SAMSN1-202ENST00000400564 ZNF219Q9P2Y4 722 aaPredicted RBP15.68■□□□□ 0.1
SAMSN1-202ENST00000400564 TRHP20396 242 aaPredicted RBP15.66■□□□□ 0.1
SAMSN1-202ENST00000400564 ABCB7O75027 752 aa15.6■□□□□ 0.09
SAMSN1-202ENST00000400564 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.59■□□□□ 0.09
SAMSN1-202ENST00000400564 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
SAMSN1-202ENST00000400564 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
SAMSN1-202ENST00000400564 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
SAMSN1-202ENST00000400564 RBM42Q9BTD8 480 aaKnown RBP15.44■□□□□ 0.06
SAMSN1-202ENST00000400564 ATF5Q9Y2D1 282 aaPredicted RBP15.27■□□□□ 0.04
SAMSN1-202ENST00000400564 CHRDL2Q6WN34 429 aa15.2■□□□□ 0.02
SAMSN1-202ENST00000400564 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
SAMSN1-202ENST00000400564 POLA2Q14181 598 aa15.08■□□□□ 0
SAMSN1-202ENST00000400564 SP7Q8TDD2 431 aaPredicted RBP14.91□□□□□ -0.02
SAMSN1-202ENST00000400564 AKT1S1Q96B36 256 aa14.9□□□□□ -0.02
SAMSN1-202ENST00000400564 ZBTB12Q9Y330 459 aaPredicted RBP14.89□□□□□ -0.03
SAMSN1-202ENST00000400564 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
SAMSN1-202ENST00000400564 PIP4P2Q8N4L2 257 aa14.71□□□□□ -0.06
SAMSN1-202ENST00000400564 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
SAMSN1-202ENST00000400564 HAX1O00165 279 aa14.6□□□□□ -0.07
SAMSN1-202ENST00000400564 MKRN4PQ13434 485 aaPredicted RBP14.59□□□□□ -0.07
SAMSN1-202ENST00000400564 PITPNM1O00562 1244 aa14.58□□□□□ -0.08
SAMSN1-202ENST00000400564 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.084e-7■□□□□ 8.9
SAMSN1-202ENST00000400564 FBLN2P98095 1184 aa14.52□□□□□ -0.08
SAMSN1-202ENST00000400564 SPDYE2BA6NHP3 402 aa14.33□□□□□ -0.12
SAMSN1-202ENST00000400564 SPDYE6P0CI01 402 aa14.33□□□□□ -0.12
SAMSN1-202ENST00000400564 SPDYE2Q495Y8 402 aa14.33□□□□□ -0.12
SAMSN1-202ENST00000400564 EVX2Q03828 476 aa14.23□□□□□ -0.13
SAMSN1-202ENST00000400564 SPDYE1Q8NFV5 336 aaPredicted RBP14.22□□□□□ -0.13
SAMSN1-202ENST00000400564 PRKAR2AP13861 404 aaKnown RBP14.21□□□□□ -0.14
SAMSN1-202ENST00000400564 SPDYE4A6NLX3 237 aa14.19□□□□□ -0.14
SAMSN1-202ENST00000400564 FKBP8Q14318 412 aa14.19□□□□□ -0.14
SAMSN1-202ENST00000400564 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
SAMSN1-202ENST00000400564 CLEC11AQ9Y240 323 aa14.17□□□□□ -0.14
SAMSN1-202ENST00000400564 SSUH2Q9Y2M2 353 aa14.11□□□□□ -0.15
SAMSN1-202ENST00000400564 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
SAMSN1-202ENST00000400564 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
SAMSN1-202ENST00000400564 GABBR2O75899 941 aa13.99□□□□□ -0.17
SAMSN1-202ENST00000400564 LHX8Q68G74 356 aa13.96□□□□□ -0.18
SAMSN1-202ENST00000400564 PROM2Q8N271 834 aa13.93□□□□□ -0.18
SAMSN1-202ENST00000400564 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
SAMSN1-202ENST00000400564 PRR29P0C7W0 189 aa13.87□□□□□ -0.19
SAMSN1-202ENST00000400564 CD44P16070 742 aaKnown RBP13.75□□□□□ -0.21
SAMSN1-202ENST00000400564 CLCN6P51797 869 aa13.72□□□□□ -0.21
SAMSN1-202ENST00000400564 STAG3Q9UJ98 1225 aa13.67□□□□□ -0.22
SAMSN1-202ENST00000400564 FARP1Q9Y4F1 1045 aaPredicted RBP13.67□□□□□ -0.22
SAMSN1-202ENST00000400564 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
SAMSN1-202ENST00000400564 DCBLD2Q96PD2 775 aa13.6□□□□□ -0.23
SAMSN1-202ENST00000400564 FBXO3Q9UK99 471 aa13.58□□□□□ -0.23
SAMSN1-202ENST00000400564 ZNF579Q8NAF0 562 aaKnown RBP13.52□□□□□ -0.25
SAMSN1-202ENST00000400564 PLSCR2Q9NRY7 297 aa13.51□□□□□ -0.25
SAMSN1-202ENST00000400564 CREBZFQ9NS37 354 aa13.48□□□□□ -0.25
SAMSN1-202ENST00000400564 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
SAMSN1-202ENST00000400564 ZRANB1Q9UGI0 708 aa13.47□□□□□ -0.25
SAMSN1-202ENST00000400564 MIER1Q8N108 512 aa13.45□□□□□ -0.26
SAMSN1-202ENST00000400564 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
SAMSN1-202ENST00000400564 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
SAMSN1-202ENST00000400564 MNX1P50219 401 aaPredicted RBP13.33□□□□□ -0.27
SAMSN1-202ENST00000400564 GALR2O43603 387 aaPredicted RBP13.32□□□□□ -0.28
SAMSN1-202ENST00000400564 IFNLR1Q8IU57 520 aaPredicted RBP13.32□□□□□ -0.28
SAMSN1-202ENST00000400564 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
SAMSN1-202ENST00000400564 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms