RNA–Protein interactions for RNA: ENST00000492728.1

CHD1L-209, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-209ENST00000492728 NISCHQ9Y2I1 1504 aa46.2■■■■■ 4.99
CHD1L-209ENST00000492728 CCDC180Q9P1Z9 1646 aa41.33■■■■■ 4.21
CHD1L-209ENST00000492728 ABCC9O60706 1549 aa41.13■■■■■ 4.17
CHD1L-209ENST00000492728 RB1CC1Q8TDY2 1594 aa39.19■■■■□ 3.86
CHD1L-209ENST00000492728 NACADO15069 1562 aa38.98■■■■□ 3.83
CHD1L-209ENST00000492728 DCAF8L2P0C7V8 631 aa38.75■■■■□ 3.79
CHD1L-209ENST00000492728 MYO15BQ96JP2 1530 aa38.53■■■■□ 3.76
CHD1L-209ENST00000492728 DNAJC5BQ9UF47 199 aa38.39■■■■□ 3.74
CHD1L-209ENST00000492728 ZCCHC6Q5VYS8 1495 aaKnown RBP38.39■■■■□ 3.74
CHD1L-209ENST00000492728 UNC13AQ9UPW8 1703 aa38.38■■■■□ 3.74
CHD1L-209ENST00000492728 PABPN1Q86U42 306 aaKnown RBP eCLIP38.3■■■■□ 3.72
CHD1L-209ENST00000492728 BICRAQ9NZM4 1560 aa38.15■■■■□ 3.7
CHD1L-209ENST00000492728 DCAF1Q9Y4B6 1507 aa38.15■■■■□ 3.7
CHD1L-209ENST00000492728 SCRIBQ14160 1630 aa37.73■■■■□ 3.63
CHD1L-209ENST00000492728 SHROOM4Q9ULL8 1493 aa37.55■■■■□ 3.6
CHD1L-209ENST00000492728 CC2D2AQ9P2K1 1620 aa37.16■■■■□ 3.54
CHD1L-209ENST00000492728 EIF4G1Q04637 1599 aaKnown RBP37.15■■■■□ 3.54
CHD1L-209ENST00000492728 CECR2Q9BXF3 1484 aa36.99■■■■□ 3.51
CHD1L-209ENST00000492728 NCAPD3P42695 1498 aa36■■■■□ 3.35
CHD1L-209ENST00000492728 SMARCA4P51532 1647 aa36■■■■□ 3.35
CHD1L-209ENST00000492728 ATAD2BQ9ULI0 1458 aa35.97■■■■□ 3.35
CHD1L-209ENST00000492728 SMARCA2P51531 1590 aa35.82■■■■□ 3.32
CHD1L-209ENST00000492728 BAZ1AQ9NRL2 1556 aaPredicted RBP35.81■■■■□ 3.32
CHD1L-209ENST00000492728 HMGXB3Q12766 1538 aa35.78■■■■□ 3.32
CHD1L-209ENST00000492728 MROH2BQ7Z745 1585 aa35.65■■■■□ 3.3
CHD1L-209ENST00000492728 PEG3Q9GZU2 1588 aa35.64■■■■□ 3.3
CHD1L-209ENST00000492728 BAZ1BQ9UIG0 1483 aaKnown RBP35.6■■■■□ 3.29
CHD1L-209ENST00000492728 NESP48681 1621 aa35.44■■■■□ 3.26
CHD1L-209ENST00000492728 ERCC6Q03468 1493 aa35.41■■■■□ 3.26
CHD1L-209ENST00000492728 CUX2O14529 1486 aa35.29■■■■□ 3.24
CHD1L-209ENST00000492728 WIZO95785 1651 aa35.22■■■■□ 3.23
CHD1L-209ENST00000492728 LAMC3Q9Y6N6 1575 aa35.13■■■■□ 3.21
CHD1L-209ENST00000492728 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
CHD1L-209ENST00000492728 RSF1Q96T23 1441 aaPredicted RBP34.97■■■■□ 3.19
CHD1L-209ENST00000492728 KIF21AQ7Z4S6 1674 aa34.96■■■■□ 3.19
CHD1L-209ENST00000492728 DNAJC5Q9H3Z4 198 aa34.95■■■■□ 3.19
CHD1L-209ENST00000492728 CADPSQ9ULU8 1353 aa34.91■■■■□ 3.18
CHD1L-209ENST00000492728 PDS5BQ9NTI5 1447 aa34.89■■■■□ 3.18
CHD1L-209ENST00000492728 TOP2AP11388 1531 aaKnown RBP34.77■■■■□ 3.16
CHD1L-209ENST00000492728 MRC2Q9UBG0 1479 aa34.64■■■■□ 3.14
CHD1L-209ENST00000492728 CFTRP13569 1480 aa34.6■■■■□ 3.13
CHD1L-209ENST00000492728 WDR62O43379 1518 aa34.58■■■■□ 3.13
CHD1L-209ENST00000492728 FANCD2Q9BXW9 1451 aa34.54■■■■□ 3.12
CHD1L-209ENST00000492728 CEP164Q9UPV0 1460 aa34.53■■■■□ 3.12
CHD1L-209ENST00000492728 CCDC88BA6NC98 1476 aa34.38■■■■□ 3.09
CHD1L-209ENST00000492728 URB2Q14146 1524 aaKnown RBP34.3■■■■□ 3.08
CHD1L-209ENST00000492728 PRDM2Q13029 1718 aa34.25■■■■□ 3.07
CHD1L-209ENST00000492728 TOPBP1Q92547 1522 aa33.94■■■■□ 3.02
CHD1L-209ENST00000492728 ZNF608Q9ULD9 1512 aaPredicted RBP33.84■■■■□ 3.01
CHD1L-209ENST00000492728 IFT140Q96RY7 1462 aa33.83■■■■□ 3.01
CHD1L-209ENST00000492728 DNMBPQ6XZF7 1577 aa33.82■■■■□ 3
CHD1L-209ENST00000492728 ABCC8Q09428 1581 aa33.75■■■□□ 2.99
CHD1L-209ENST00000492728 EIF4G3O43432 1585 aaKnown RBP33.65■■■□□ 2.98
CHD1L-209ENST00000492728 TARBP1Q13395 1621 aaKnown RBP33.64■■■□□ 2.98
CHD1L-209ENST00000492728 OSCARQ8IYS5 282 aa33.63■■■□□ 2.97
CHD1L-209ENST00000492728 POLA1P09884 1462 aaPredicted RBP33.62■■■□□ 2.97
CHD1L-209ENST00000492728 SUPT5HO00267 1087 aaKnown RBP33.53■■■□□ 2.96
CHD1L-209ENST00000492728 TRIM41Q8WV44 630 aa33.52■■■□□ 2.96
CHD1L-209ENST00000492728 AQRO60306 1485 aaKnown RBP eCLIP33.51■■■□□ 2.964e-7■■■■■ 28.4
CHD1L-209ENST00000492728 RAD54L2Q9Y4B4 1467 aa33.5■■■□□ 2.95
CHD1L-209ENST00000492728 CUX1P39880 1505 aa33.48■■■□□ 2.95
CHD1L-209ENST00000492728 FGD5Q6ZNL6 1462 aa33.44■■■□□ 2.94
CHD1L-209ENST00000492728 SOGA1O94964 1423 aa33.39■■■□□ 2.94
CHD1L-209ENST00000492728 TDRD9Q8NDG6 1382 aaKnown RBP33.34■■■□□ 2.93
CHD1L-209ENST00000492728 CHD1O14646 1710 aa33.33■■■□□ 2.93
CHD1L-209ENST00000492728 RIMBP3CA6NJZ7 1639 aa33.31■■■□□ 2.92
CHD1L-209ENST00000492728 RIMBP3BA6NNM3 1639 aa33.31■■■□□ 2.92
CHD1L-209ENST00000492728 RIMBP3Q9UFD9 1639 aa33.31■■■□□ 2.92
CHD1L-209ENST00000492728 WDR97A6NE52 1622 aa33.23■■■□□ 2.91
CHD1L-209ENST00000492728 ARHGEF11O15085 1522 aa33.23■■■□□ 2.91
CHD1L-209ENST00000492728 SNAPC4Q5SXM2 1469 aa33.2■■■□□ 2.91
CHD1L-209ENST00000492728 FBLN2P98095 1184 aa33.14■■■□□ 2.9
CHD1L-209ENST00000492728 GRIN2BQ13224 1484 aa33.1■■■□□ 2.89
CHD1L-209ENST00000492728 MAGI1Q96QZ7 1491 aaPredicted RBP33.06■■■□□ 2.88
CHD1L-209ENST00000492728 ABCA10Q8WWZ4 1543 aa33.06■■■□□ 2.88
CHD1L-209ENST00000492728 ABCA5Q8WWZ7 1642 aa33.02■■■□□ 2.88
CHD1L-209ENST00000492728 PBRM1Q86U86 1689 aa33.02■■■□□ 2.88
CHD1L-209ENST00000492728 GAPVD1Q14C86 1478 aa33.01■■■□□ 2.88
CHD1L-209ENST00000492728 SYNJ1O43426 1573 aa32.99■■■□□ 2.87
CHD1L-209ENST00000492728 CLASP1Q7Z460 1538 aa32.98■■■□□ 2.87
CHD1L-209ENST00000492728 BIVM-ERCC5R4GMW8 1640 aa32.98■■■□□ 2.87
CHD1L-209ENST00000492728 TOP2BQ02880 1626 aa32.96■■■□□ 2.87
CHD1L-209ENST00000492728 SYNJ2O15056 1496 aa32.96■■■□□ 2.87
CHD1L-209ENST00000492728 ARAP1Q96P48 1450 aa32.95■■■□□ 2.87
CHD1L-209ENST00000492728 WRNQ14191 1432 aaPredicted RBP eCLIP32.94■■■□□ 2.86
CHD1L-209ENST00000492728 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
CHD1L-209ENST00000492728 CYB5RLQ6IPT4 315 aa32.87■■■□□ 2.85
CHD1L-209ENST00000492728 ADAMTS12P58397 1594 aa32.76■■■□□ 2.84
CHD1L-209ENST00000492728 GRIN2AQ12879 1464 aa32.69■■■□□ 2.82
CHD1L-209ENST00000492728 ERICH3Q5RHP9 1530 aa32.62■■■□□ 2.81
CHD1L-209ENST00000492728 CEP170Q5SW79 1584 aa32.62■■■□□ 2.81
CHD1L-209ENST00000492728 FHAD1B1AJZ9 1412 aa32.6■■■□□ 2.81
CHD1L-209ENST00000492728 NUP160Q12769 1436 aa32.6■■■□□ 2.81
CHD1L-209ENST00000492728 ERCC6L2Q5T890 1561 aa32.53■■■□□ 2.8
CHD1L-209ENST00000492728 SHROOM2Q13796 1616 aa32.43■■■□□ 2.78
CHD1L-209ENST00000492728 TRHP20396 242 aaPredicted RBP32.37■■■□□ 2.77
CHD1L-209ENST00000492728 RUSC2Q8N2Y8 1516 aa32.3■■■□□ 2.76
CHD1L-209ENST00000492728 IGF1RP08069 1367 aa32.27■■■□□ 2.76
CHD1L-209ENST00000492728 KIF27Q86VH2 1401 aa32.26■■■□□ 2.76
CHD1L-209ENST00000492728 PRG4Q92954 1404 aaPredicted RBP32.22■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms