RNA–Protein interactions for RNA: ENST00000518038.1

VPS37A-203, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 655 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-203ENST00000518038 NISCHQ9Y2I1 1504 aa44.45■■■■■ 4.71
VPS37A-203ENST00000518038 CCDC180Q9P1Z9 1646 aa39.58■■■■□ 3.93
VPS37A-203ENST00000518038 ABCC9O60706 1549 aa39.52■■■■□ 3.92
VPS37A-203ENST00000518038 RB1CC1Q8TDY2 1594 aa37.6■■■■□ 3.61
VPS37A-203ENST00000518038 DCAF8L2P0C7V8 631 aa37.57■■■■□ 3.6
VPS37A-203ENST00000518038 NACADO15069 1562 aa37.42■■■■□ 3.58
VPS37A-203ENST00000518038 MYO15BQ96JP2 1530 aa36.98■■■■□ 3.51
VPS37A-203ENST00000518038 PABPN1Q86U42 306 aaKnown RBP eCLIP36.96■■■■□ 3.51
VPS37A-203ENST00000518038 DNAJC5BQ9UF47 199 aa36.96■■■■□ 3.51
VPS37A-203ENST00000518038 ZCCHC6Q5VYS8 1495 aaKnown RBP36.87■■■■□ 3.49
VPS37A-203ENST00000518038 UNC13AQ9UPW8 1703 aa36.73■■■■□ 3.47
VPS37A-203ENST00000518038 DCAF1Q9Y4B6 1507 aa36.64■■■■□ 3.46
VPS37A-203ENST00000518038 BICRAQ9NZM4 1560 aa36.58■■■■□ 3.45
VPS37A-203ENST00000518038 SCRIBQ14160 1630 aa36.23■■■■□ 3.39
VPS37A-203ENST00000518038 SHROOM4Q9ULL8 1493 aa35.95■■■■□ 3.35
VPS37A-203ENST00000518038 CC2D2AQ9P2K1 1620 aa35.64■■■■□ 3.3
VPS37A-203ENST00000518038 EIF4G1Q04637 1599 aaKnown RBP35.63■■■■□ 3.29
VPS37A-203ENST00000518038 CECR2Q9BXF3 1484 aa35.53■■■■□ 3.28
VPS37A-203ENST00000518038 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
VPS37A-203ENST00000518038 ATAD2BQ9ULI0 1458 aa34.58■■■■□ 3.13
VPS37A-203ENST00000518038 SMARCA4P51532 1647 aa34.55■■■■□ 3.12
VPS37A-203ENST00000518038 BAZ1AQ9NRL2 1556 aaPredicted RBP34.41■■■■□ 3.1
VPS37A-203ENST00000518038 SMARCA2P51531 1590 aa34.4■■■■□ 3.1
VPS37A-203ENST00000518038 MROH2BQ7Z745 1585 aa34.31■■■■□ 3.08
VPS37A-203ENST00000518038 HMGXB3Q12766 1538 aa34.3■■■■□ 3.08
VPS37A-203ENST00000518038 BAZ1BQ9UIG0 1483 aaKnown RBP34.22■■■■□ 3.07
VPS37A-203ENST00000518038 PEG3Q9GZU2 1588 aa34.19■■■■□ 3.06
VPS37A-203ENST00000518038 NESP48681 1621 aa34.06■■■■□ 3.04
VPS37A-203ENST00000518038 ERCC6Q03468 1493 aa34.02■■■■□ 3.04
VPS37A-203ENST00000518038 WIZO95785 1651 aa33.87■■■■□ 3.01
VPS37A-203ENST00000518038 CUX2O14529 1486 aa33.81■■■■□ 3
VPS37A-203ENST00000518038 RSF1Q96T23 1441 aaPredicted RBP33.72■■■□□ 2.99
VPS37A-203ENST00000518038 LAMC3Q9Y6N6 1575 aa33.71■■■□□ 2.99
VPS37A-203ENST00000518038 CADPSQ9ULU8 1353 aa33.62■■■□□ 2.97
VPS37A-203ENST00000518038 DNAJC5Q9H3Z4 198 aa33.6■■■□□ 2.97
VPS37A-203ENST00000518038 PDS5BQ9NTI5 1447 aa33.56■■■□□ 2.96
VPS37A-203ENST00000518038 THOC2Q8NI27 1593 aaKnown RBP33.51■■■□□ 2.95
VPS37A-203ENST00000518038 KIF21AQ7Z4S6 1674 aa33.48■■■□□ 2.95
VPS37A-203ENST00000518038 TOP2AP11388 1531 aaKnown RBP33.41■■■□□ 2.94
VPS37A-203ENST00000518038 CFTRP13569 1480 aa33.27■■■□□ 2.92
VPS37A-203ENST00000518038 MRC2Q9UBG0 1479 aa33.25■■■□□ 2.91
VPS37A-203ENST00000518038 FANCD2Q9BXW9 1451 aa33.21■■■□□ 2.91
VPS37A-203ENST00000518038 CEP164Q9UPV0 1460 aa33.18■■■□□ 2.9
VPS37A-203ENST00000518038 WDR62O43379 1518 aa33.14■■■□□ 2.9
VPS37A-203ENST00000518038 CCDC88BA6NC98 1476 aa33.13■■■□□ 2.89
VPS37A-203ENST00000518038 URB2Q14146 1524 aaKnown RBP32.94■■■□□ 2.86
VPS37A-203ENST00000518038 PRDM2Q13029 1718 aa32.75■■■□□ 2.83
VPS37A-203ENST00000518038 TOPBP1Q92547 1522 aa32.61■■■□□ 2.81
VPS37A-203ENST00000518038 SUPT5HO00267 1087 aaKnown RBP32.57■■■□□ 2.8
VPS37A-203ENST00000518038 ZNF608Q9ULD9 1512 aaPredicted RBP32.52■■■□□ 2.8
VPS37A-203ENST00000518038 IFT140Q96RY7 1462 aa32.51■■■□□ 2.79
VPS37A-203ENST00000518038 ABCC8Q09428 1581 aa32.49■■■□□ 2.79
VPS37A-203ENST00000518038 DNMBPQ6XZF7 1577 aa32.46■■■□□ 2.79
VPS37A-203ENST00000518038 OSCARQ8IYS5 282 aa32.45■■■□□ 2.79
VPS37A-203ENST00000518038 POLA1P09884 1462 aaPredicted RBP32.3■■■□□ 2.76
VPS37A-203ENST00000518038 TRIM41Q8WV44 630 aa32.3■■■□□ 2.76
VPS37A-203ENST00000518038 AQRO60306 1485 aaKnown RBP eCLIP32.29■■■□□ 2.76
VPS37A-203ENST00000518038 TARBP1Q13395 1621 aaKnown RBP32.27■■■□□ 2.76
VPS37A-203ENST00000518038 RAD54L2Q9Y4B4 1467 aa32.26■■■□□ 2.75
VPS37A-203ENST00000518038 EIF4G3O43432 1585 aaKnown RBP32.23■■■□□ 2.75
VPS37A-203ENST00000518038 SOGA1O94964 1423 aa32.21■■■□□ 2.75
VPS37A-203ENST00000518038 CUX1P39880 1505 aa32.19■■■□□ 2.74
VPS37A-203ENST00000518038 TDRD9Q8NDG6 1382 aaKnown RBP32.16■■■□□ 2.74
VPS37A-203ENST00000518038 FGD5Q6ZNL6 1462 aa32.16■■■□□ 2.74
VPS37A-203ENST00000518038 FBLN2P98095 1184 aa32.05■■■□□ 2.72
VPS37A-203ENST00000518038 CHD1O14646 1710 aa31.92■■■□□ 2.7
VPS37A-203ENST00000518038 SNAPC4Q5SXM2 1469 aa31.9■■■□□ 2.7
VPS37A-203ENST00000518038 RIMBP3CA6NJZ7 1639 aa31.89■■■□□ 2.7
VPS37A-203ENST00000518038 RIMBP3BA6NNM3 1639 aa31.89■■■□□ 2.7
VPS37A-203ENST00000518038 RIMBP3Q9UFD9 1639 aa31.89■■■□□ 2.7
VPS37A-203ENST00000518038 ARHGEF11O15085 1522 aa31.85■■■□□ 2.69
VPS37A-203ENST00000518038 GRIN2BQ13224 1484 aa31.83■■■□□ 2.69
VPS37A-203ENST00000518038 WDR97A6NE52 1622 aa31.82■■■□□ 2.69
VPS37A-203ENST00000518038 CHMP7Q8WUX9 453 aaPredicted RBP31.81■■■□□ 2.68
VPS37A-203ENST00000518038 GAPVD1Q14C86 1478 aa31.78■■■□□ 2.68
VPS37A-203ENST00000518038 ABCA10Q8WWZ4 1543 aa31.77■■■□□ 2.68
VPS37A-203ENST00000518038 WRNQ14191 1432 aaPredicted RBP eCLIP31.76■■■□□ 2.68
VPS37A-203ENST00000518038 MAGI1Q96QZ7 1491 aaPredicted RBP31.76■■■□□ 2.67
VPS37A-203ENST00000518038 CYB5RLQ6IPT4 315 aa31.73■■■□□ 2.67
VPS37A-203ENST00000518038 SYNJ1O43426 1573 aa31.71■■■□□ 2.67
VPS37A-203ENST00000518038 TOP2BQ02880 1626 aa31.68■■■□□ 2.66
VPS37A-203ENST00000518038 SYNJ2O15056 1496 aa31.68■■■□□ 2.66
VPS37A-203ENST00000518038 ABCA5Q8WWZ7 1642 aa31.66■■■□□ 2.66
VPS37A-203ENST00000518038 BIVM-ERCC5R4GMW8 1640 aa31.64■■■□□ 2.66
VPS37A-203ENST00000518038 PBRM1Q86U86 1689 aa31.63■■■□□ 2.65
VPS37A-203ENST00000518038 CLASP1Q7Z460 1538 aa31.6■■■□□ 2.65
VPS37A-203ENST00000518038 ARAP1Q96P48 1450 aa31.59■■■□□ 2.65
VPS37A-203ENST00000518038 GRIN2AQ12879 1464 aa31.42■■■□□ 2.62
VPS37A-203ENST00000518038 ADAMTS12P58397 1594 aa31.4■■■□□ 2.62
VPS37A-203ENST00000518038 FHAD1B1AJZ9 1412 aa31.38■■■□□ 2.61
VPS37A-203ENST00000518038 ERICH3Q5RHP9 1530 aa31.34■■■□□ 2.61
VPS37A-203ENST00000518038 NUP160Q12769 1436 aa31.32■■■□□ 2.6
VPS37A-203ENST00000518038 CEP170Q5SW79 1584 aa31.3■■■□□ 2.6
VPS37A-203ENST00000518038 TRHP20396 242 aaPredicted RBP31.25■■■□□ 2.59
VPS37A-203ENST00000518038 ERCC6L2Q5T890 1561 aa31.23■■■□□ 2.59
VPS37A-203ENST00000518038 IGF1RP08069 1367 aa31.17■■■□□ 2.58
VPS37A-203ENST00000518038 KIF27Q86VH2 1401 aa31.12■■■□□ 2.57
VPS37A-203ENST00000518038 JPH4Q96JJ6 628 aa31.09■■■□□ 2.57
VPS37A-203ENST00000518038 SHROOM2Q13796 1616 aa31.08■■■□□ 2.57
VPS37A-203ENST00000518038 PRG4Q92954 1404 aaPredicted RBP31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms