RNA–Protein interactions for RNA: ENST00000593699.5

LRMDA-209, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 1 (best)

Gene LRMDA, Length 1,124 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-209ENST00000593699 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
LRMDA-209ENST00000593699 CCDC180Q9P1Z9 1646 aa24.3■■□□□ 1.48
LRMDA-209ENST00000593699 ABCC9O60706 1549 aa23.9■■□□□ 1.42
LRMDA-209ENST00000593699 RB1CC1Q8TDY2 1594 aa22.97■■□□□ 1.27
LRMDA-209ENST00000593699 NACADO15069 1562 aa22.85■■□□□ 1.25
LRMDA-209ENST00000593699 MYO15BQ96JP2 1530 aa22.62■■□□□ 1.21
LRMDA-209ENST00000593699 DCAF8L2P0C7V8 631 aa22.62■■□□□ 1.21
LRMDA-209ENST00000593699 ZCCHC6Q5VYS8 1495 aaKnown RBP22.51■■□□□ 1.19
LRMDA-209ENST00000593699 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
LRMDA-209ENST00000593699 UNC13AQ9UPW8 1703 aa22.39■■□□□ 1.17
LRMDA-209ENST00000593699 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
LRMDA-209ENST00000593699 BICRAQ9NZM4 1560 aa22.18■■□□□ 1.14
LRMDA-209ENST00000593699 SHROOM4Q9ULL8 1493 aa22.09■■□□□ 1.13
LRMDA-209ENST00000593699 SCRIBQ14160 1630 aa22.08■■□□□ 1.13
LRMDA-209ENST00000593699 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
LRMDA-209ENST00000593699 EIF4G1Q04637 1599 aaKnown RBP21.67■■□□□ 1.06
LRMDA-209ENST00000593699 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
LRMDA-209ENST00000593699 CECR2Q9BXF3 1484 aa21.54■■□□□ 1.04
LRMDA-209ENST00000593699 SMARCA4P51532 1647 aa21.09■□□□□ 0.97
LRMDA-209ENST00000593699 BAZ1AQ9NRL2 1556 aaPredicted RBP21.06■□□□□ 0.96
LRMDA-209ENST00000593699 SMARCA2P51531 1590 aa21.05■□□□□ 0.96
LRMDA-209ENST00000593699 NCAPD3P42695 1498 aa21.02■□□□□ 0.96
LRMDA-209ENST00000593699 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
LRMDA-209ENST00000593699 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
LRMDA-209ENST00000593699 PEG3Q9GZU2 1588 aa20.89■□□□□ 0.93
LRMDA-209ENST00000593699 BAZ1BQ9UIG0 1483 aaKnown RBP20.87■□□□□ 0.93
LRMDA-209ENST00000593699 MROH2BQ7Z745 1585 aa20.8■□□□□ 0.92
LRMDA-209ENST00000593699 ERCC6Q03468 1493 aa20.71■□□□□ 0.91
LRMDA-209ENST00000593699 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
LRMDA-209ENST00000593699 WIZO95785 1651 aa20.59■□□□□ 0.89
LRMDA-209ENST00000593699 CUX2O14529 1486 aa20.59■□□□□ 0.89
LRMDA-209ENST00000593699 NESP48681 1621 aa20.57■□□□□ 0.88
LRMDA-209ENST00000593699 RSF1Q96T23 1441 aaPredicted RBP20.45■□□□□ 0.86
LRMDA-209ENST00000593699 PDS5BQ9NTI5 1447 aa20.44■□□□□ 0.86
LRMDA-209ENST00000593699 TOP2AP11388 1531 aaKnown RBP20.43■□□□□ 0.86
LRMDA-209ENST00000593699 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
LRMDA-209ENST00000593699 KIF21AQ7Z4S6 1674 aa20.41■□□□□ 0.86
LRMDA-209ENST00000593699 CADPSQ9ULU8 1353 aa20.38■□□□□ 0.85
LRMDA-209ENST00000593699 MRC2Q9UBG0 1479 aa20.25■□□□□ 0.83
LRMDA-209ENST00000593699 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
LRMDA-209ENST00000593699 CFTRP13569 1480 aa20.23■□□□□ 0.83
LRMDA-209ENST00000593699 WDR62O43379 1518 aa20.2■□□□□ 0.82
LRMDA-209ENST00000593699 FANCD2Q9BXW9 1451 aa20.19■□□□□ 0.82
LRMDA-209ENST00000593699 PRDM2Q13029 1718 aa20.18■□□□□ 0.82
LRMDA-209ENST00000593699 DNAJC5Q9H3Z4 198 aa20.13■□□□□ 0.81
LRMDA-209ENST00000593699 CCDC88BA6NC98 1476 aa20.09■□□□□ 0.81
LRMDA-209ENST00000593699 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
LRMDA-209ENST00000593699 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
LRMDA-209ENST00000593699 DNMBPQ6XZF7 1577 aa19.83■□□□□ 0.77
LRMDA-209ENST00000593699 TOPBP1Q92547 1522 aa19.83■□□□□ 0.77
LRMDA-209ENST00000593699 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
LRMDA-209ENST00000593699 SUPT5HO00267 1087 aaKnown RBP19.7■□□□□ 0.74
LRMDA-209ENST00000593699 EIF4G3O43432 1585 aaKnown RBP19.69■□□□□ 0.74
LRMDA-209ENST00000593699 ZNF608Q9ULD9 1512 aaPredicted RBP19.66■□□□□ 0.74
LRMDA-209ENST00000593699 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.73
LRMDA-209ENST00000593699 TARBP1Q13395 1621 aaKnown RBP19.64■□□□□ 0.73
LRMDA-209ENST00000593699 WDR97A6NE52 1622 aa19.58■□□□□ 0.73
LRMDA-209ENST00000593699 OSCARQ8IYS5 282 aa19.58■□□□□ 0.72
LRMDA-209ENST00000593699 CUX1P39880 1505 aa19.56■□□□□ 0.72
LRMDA-209ENST00000593699 FGD5Q6ZNL6 1462 aa19.56■□□□□ 0.72
LRMDA-209ENST00000593699 SOGA1O94964 1423 aa19.53■□□□□ 0.72
LRMDA-209ENST00000593699 RAD54L2Q9Y4B4 1467 aa19.51■□□□□ 0.71
LRMDA-209ENST00000593699 AQRO60306 1485 aaKnown RBP eCLIP19.5■□□□□ 0.71
LRMDA-209ENST00000593699 CHD1O14646 1710 aa19.48■□□□□ 0.71
LRMDA-209ENST00000593699 TDRD9Q8NDG6 1382 aaKnown RBP19.42■□□□□ 0.7
LRMDA-209ENST00000593699 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
LRMDA-209ENST00000593699 SNAPC4Q5SXM2 1469 aa19.4■□□□□ 0.7
LRMDA-209ENST00000593699 MAGI1Q96QZ7 1491 aaPredicted RBP19.4■□□□□ 0.7
LRMDA-209ENST00000593699 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
LRMDA-209ENST00000593699 BIVM-ERCC5R4GMW8 1640 aa19.39■□□□□ 0.69
LRMDA-209ENST00000593699 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
LRMDA-209ENST00000593699 RIMBP3CA6NJZ7 1639 aa19.37■□□□□ 0.69
LRMDA-209ENST00000593699 RIMBP3BA6NNM3 1639 aa19.37■□□□□ 0.69
LRMDA-209ENST00000593699 TOP2BQ02880 1626 aa19.37■□□□□ 0.69
LRMDA-209ENST00000593699 RIMBP3Q9UFD9 1639 aa19.37■□□□□ 0.69
LRMDA-209ENST00000593699 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
LRMDA-209ENST00000593699 WRNQ14191 1432 aaPredicted RBP eCLIP19.35■□□□□ 0.69
LRMDA-209ENST00000593699 FBLN2P98095 1184 aa19.35■□□□□ 0.69
LRMDA-209ENST00000593699 ABCA5Q8WWZ7 1642 aa19.35■□□□□ 0.69
LRMDA-209ENST00000593699 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
LRMDA-209ENST00000593699 GAPVD1Q14C86 1478 aa19.33■□□□□ 0.68
LRMDA-209ENST00000593699 SYNJ1O43426 1573 aa19.32■□□□□ 0.68
LRMDA-209ENST00000593699 SYNJ2O15056 1496 aa19.3■□□□□ 0.68
LRMDA-209ENST00000593699 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
LRMDA-209ENST00000593699 CLASP1Q7Z460 1538 aa19.24■□□□□ 0.67
LRMDA-209ENST00000593699 ADAMTS12P58397 1594 aa19.21■□□□□ 0.67
LRMDA-209ENST00000593699 ERICH3Q5RHP9 1530 aa19.16■□□□□ 0.66
LRMDA-209ENST00000593699 GRIN2AQ12879 1464 aa19.14■□□□□ 0.65
LRMDA-209ENST00000593699 ARAP1Q96P48 1450 aa19.14■□□□□ 0.65
LRMDA-209ENST00000593699 FHAD1B1AJZ9 1412 aa19.11■□□□□ 0.65
LRMDA-209ENST00000593699 CYB5RLQ6IPT4 315 aa19.07■□□□□ 0.64
LRMDA-209ENST00000593699 CEP170Q5SW79 1584 aa19.05■□□□□ 0.64
LRMDA-209ENST00000593699 NUP160Q12769 1436 aa19.04■□□□□ 0.64
LRMDA-209ENST00000593699 KIF27Q86VH2 1401 aa19■□□□□ 0.63
LRMDA-209ENST00000593699 CUL7Q14999 1698 aa18.98■□□□□ 0.63
LRMDA-209ENST00000593699 SHROOM2Q13796 1616 aa18.96■□□□□ 0.63
LRMDA-209ENST00000593699 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
LRMDA-209ENST00000593699 ERCC6L2Q5T890 1561 aa18.88■□□□□ 0.61
LRMDA-209ENST00000593699 TRHP20396 242 aaPredicted RBP18.84■□□□□ 0.61
LRMDA-209ENST00000593699 IGF1RP08069 1367 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms