RNA–Protein interactions for RNA: ENST00000400566.5

SAMSN1-203, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMSN1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-203ENST00000400566 AEBP2Q6ZN18 517 aaPredicted RBP16.73■□□□□ 0.27
SAMSN1-203ENST00000400566 POTEDQ86YR6 584 aa16.18■□□□□ 0.18
SAMSN1-203ENST00000400566 CHIC1Q5VXU3 224 aa15.94■□□□□ 0.14
SAMSN1-203ENST00000400566 SENP3Q9H4L4 574 aaPredicted RBP14.84□□□□□ -0.03
SAMSN1-203ENST00000400566 PHF23Q9BUL5 403 aaPredicted RBP14.27□□□□□ -0.12
SAMSN1-203ENST00000400566 MSH5O43196 834 aa13.86□□□□□ -0.19
SAMSN1-203ENST00000400566 FOXD1Q16676 465 aa13.84□□□□□ -0.19
SAMSN1-203ENST00000400566 CACNB1Q02641 598 aaPredicted RBP12.82□□□□□ -0.36
SAMSN1-203ENST00000400566 NISCHQ9Y2I1 1504 aa12.81□□□□□ -0.36
SAMSN1-203ENST00000400566 PIAS4Q8N2W9 510 aaPredicted RBP12.58□□□□□ -0.4
SAMSN1-203ENST00000400566 POTEHQ6S545 545 aa12.39□□□□□ -0.43
SAMSN1-203ENST00000400566 PLPPR3Q6T4P5 718 aa11.7□□□□□ -0.54
SAMSN1-203ENST00000400566 RNF39Q9H2S5 420 aa11.52□□□□□ -0.57
SAMSN1-203ENST00000400566 PPP6R1Q9UPN7 881 aa11.51□□□□□ -0.57
SAMSN1-203ENST00000400566 DMRT2Q9Y5R5 561 aa11.44□□□□□ -0.58
SAMSN1-203ENST00000400566 ADRA2BP18089 450 aa11.42□□□□□ -0.58
SAMSN1-203ENST00000400566 C1QBPQ07021 282 aaKnown RBP11.39□□□□□ -0.59
SAMSN1-203ENST00000400566 CCDC180Q9P1Z9 1646 aa11.27□□□□□ -0.6
SAMSN1-203ENST00000400566 PLSCR2Q9NRY7 297 aa11.12□□□□□ -0.63
SAMSN1-203ENST00000400566 DCAF8L1A6NGE4 600 aa11□□□□□ -0.65
SAMSN1-203ENST00000400566 MAPK8IP2Q13387 824 aaPredicted RBP10.95□□□□□ -0.66
SAMSN1-203ENST00000400566 SP7Q8TDD2 431 aaPredicted RBP10.85□□□□□ -0.67
SAMSN1-203ENST00000400566 SCAF1Q9H7N4 1312 aaKnown RBP10.84□□□□□ -0.67
SAMSN1-203ENST00000400566 ZCCHC6Q5VYS8 1495 aaKnown RBP10.75□□□□□ -0.69
SAMSN1-203ENST00000400566 ABCC9O60706 1549 aa10.7□□□□□ -0.7
SAMSN1-203ENST00000400566 DCAF1Q9Y4B6 1507 aa10.64□□□□□ -0.71
SAMSN1-203ENST00000400566 MYO15BQ96JP2 1530 aa10.57□□□□□ -0.72
SAMSN1-203ENST00000400566 DNAJC5BQ9UF47 199 aa10.55□□□□□ -0.72
SAMSN1-203ENST00000400566 DCAF8L2P0C7V8 631 aa10.52□□□□□ -0.73
SAMSN1-203ENST00000400566 NACADO15069 1562 aa10.51□□□□□ -0.73
SAMSN1-203ENST00000400566 RB1CC1Q8TDY2 1594 aa10.45□□□□□ -0.74
SAMSN1-203ENST00000400566 HOXD11P31277 338 aaPredicted RBP10.37□□□□□ -0.75
SAMSN1-203ENST00000400566 PPP4R3CPQ6ZMV5 832 aa10.34□□□□□ -0.75
SAMSN1-203ENST00000400566 SCRIBQ14160 1630 aa10.28□□□□□ -0.76
SAMSN1-203ENST00000400566 SHROOM4Q9ULL8 1493 aa10.27□□□□□ -0.77
SAMSN1-203ENST00000400566 CHRDL2Q6WN34 429 aa10.26□□□□□ -0.77
SAMSN1-203ENST00000400566 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
SAMSN1-203ENST00000400566 DSG3P32926 999 aa10.19□□□□□ -0.78
SAMSN1-203ENST00000400566 KCNA4P22459 653 aa10.18□□□□□ -0.78
SAMSN1-203ENST00000400566 LHX8Q68G74 356 aa10.16□□□□□ -0.78
SAMSN1-203ENST00000400566 BICRAQ9NZM4 1560 aa10.13□□□□□ -0.79
SAMSN1-203ENST00000400566 PABPN1Q86U42 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
SAMSN1-203ENST00000400566 NCBP3Q53F19 620 aaKnown RBP10.02□□□□□ -0.8
SAMSN1-203ENST00000400566 CNKSR2Q8WXI2 1034 aa10.02□□□□□ -0.8
SAMSN1-203ENST00000400566 RBM42Q9BTD8 480 aaKnown RBP10□□□□□ -0.81
SAMSN1-203ENST00000400566 HAX1O00165 279 aa9.96□□□□□ -0.82
SAMSN1-203ENST00000400566 NPM3O75607 178 aaKnown RBP9.96□□□□□ -0.82
SAMSN1-203ENST00000400566 CECR2Q9BXF3 1484 aa9.94□□□□□ -0.82
SAMSN1-203ENST00000400566 BAZ1AQ9NRL2 1556 aaPredicted RBP9.91□□□□□ -0.82
SAMSN1-203ENST00000400566 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.89□□□□□ -0.832e-8■□□□□ 9.9
SAMSN1-203ENST00000400566 CAPN15O75808 1086 aa9.89□□□□□ -0.83
SAMSN1-203ENST00000400566 SMARCA4P51532 1647 aa9.88□□□□□ -0.83
SAMSN1-203ENST00000400566 MROH2BQ7Z745 1585 aa9.88□□□□□ -0.83
SAMSN1-203ENST00000400566 RSF1Q96T23 1441 aaPredicted RBP9.87□□□□□ -0.83
SAMSN1-203ENST00000400566 RNF216Q9NWF9 866 aaPredicted RBP9.87□□□□□ -0.83
SAMSN1-203ENST00000400566 PCDH10Q9P2E7 1040 aa9.84□□□□□ -0.83
SAMSN1-203ENST00000400566 EIF4G1Q04637 1599 aaKnown RBP9.83□□□□□ -0.84
SAMSN1-203ENST00000400566 SUPT5HO00267 1087 aaKnown RBP9.81□□□□□ -0.84
SAMSN1-203ENST00000400566 PEG3Q9GZU2 1588 aa9.8□□□□□ -0.84
SAMSN1-203ENST00000400566 WIZO95785 1651 aa9.78□□□□□ -0.84
SAMSN1-203ENST00000400566 SMARCA2P51531 1590 aa9.75□□□□□ -0.85
SAMSN1-203ENST00000400566 ATAD2BQ9ULI0 1458 aa9.75□□□□□ -0.85
SAMSN1-203ENST00000400566 CC2D2AQ9P2K1 1620 aa9.71□□□□□ -0.85
SAMSN1-203ENST00000400566 TOP2AP11388 1531 aaKnown RBP9.7□□□□□ -0.86
SAMSN1-203ENST00000400566 NCAPD3P42695 1498 aa9.69□□□□□ -0.86
SAMSN1-203ENST00000400566 HMGXB3Q12766 1538 aa9.69□□□□□ -0.86
SAMSN1-203ENST00000400566 BAZ1BQ9UIG0 1483 aaKnown RBP9.68□□□□□ -0.86
SAMSN1-203ENST00000400566 SPINK5Q9NQ38 1064 aaPredicted RBP9.66□□□□□ -0.86
SAMSN1-203ENST00000400566 SLC4A1APQ9BWU0 796 aaKnown RBP9.66□□□□□ -0.86
SAMSN1-203ENST00000400566 POTEMA6NI47 508 aa9.62□□□□□ -0.87
SAMSN1-203ENST00000400566 PIP4P2Q8N4L2 257 aa9.61□□□□□ -0.87
SAMSN1-203ENST00000400566 CCDC88BA6NC98 1476 aa9.58□□□□□ -0.88
SAMSN1-203ENST00000400566 POTEGQ6S5H5 508 aa9.52□□□□□ -0.89
SAMSN1-203ENST00000400566 EVX2Q03828 476 aa9.47□□□□□ -0.89
SAMSN1-203ENST00000400566 EHMT2Q96KQ7 1210 aa9.45□□□□□ -0.9
SAMSN1-203ENST00000400566 CFTRP13569 1480 aa9.44□□□□□ -0.9
SAMSN1-203ENST00000400566 CADPSQ9ULU8 1353 aa9.42□□□□□ -0.9
SAMSN1-203ENST00000400566 PRDM2Q13029 1718 aa9.42□□□□□ -0.9
SAMSN1-203ENST00000400566 SLC4A2P04920 1241 aa9.41□□□□□ -0.9
SAMSN1-203ENST00000400566 ZBTB22O15209 634 aa9.4□□□□□ -0.9
SAMSN1-203ENST00000400566 LAMC3Q9Y6N6 1575 aa9.4□□□□□ -0.91
SAMSN1-203ENST00000400566 ABCB7O75027 752 aa9.38□□□□□ -0.91
SAMSN1-203ENST00000400566 ZNF219Q9P2Y4 722 aaPredicted RBP9.36□□□□□ -0.91
SAMSN1-203ENST00000400566 U3KPZ7 1027 aaPredicted RBP9.36□□□□□ -0.91
SAMSN1-203ENST00000400566 GABBR2O75899 941 aa9.36□□□□□ -0.91
SAMSN1-203ENST00000400566 CSRNP3Q8WYN3 585 aa9.36□□□□□ -0.91
SAMSN1-203ENST00000400566 NESP48681 1621 aa9.35□□□□□ -0.91
SAMSN1-203ENST00000400566 APLP2Q06481 763 aa9.35□□□□□ -0.91
SAMSN1-203ENST00000400566 FXR2P51116 673 aaKnown RBP eCLIP9.34□□□□□ -0.914e-7■□□□□ 8.9
SAMSN1-203ENST00000400566 AKT1S1Q96B36 256 aa9.33□□□□□ -0.92
SAMSN1-203ENST00000400566 ABCC8Q09428 1581 aa9.32□□□□□ -0.92
SAMSN1-203ENST00000400566 FOXD4L1Q9NU39 408 aa9.32□□□□□ -0.92
SAMSN1-203ENST00000400566 FANCD2Q9BXW9 1451 aa9.31□□□□□ -0.92
SAMSN1-203ENST00000400566 PDS5BQ9NTI5 1447 aa9.3□□□□□ -0.92
SAMSN1-203ENST00000400566 WRNQ14191 1432 aaPredicted RBP eCLIP9.3□□□□□ -0.92
SAMSN1-203ENST00000400566 KIF21AQ7Z4S6 1674 aa9.27□□□□□ -0.93
SAMSN1-203ENST00000400566 CEP164Q9UPV0 1460 aa9.27□□□□□ -0.93
SAMSN1-203ENST00000400566 TRHP20396 242 aaPredicted RBP9.27□□□□□ -0.93
SAMSN1-203ENST00000400566 SYNJ1O43426 1573 aa9.26□□□□□ -0.93
SAMSN1-203ENST00000400566 TOP2BQ02880 1626 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms