RNA–Protein interactions for RNA: ENST00000519381.1

VPS37A-204, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 4

Gene VPS37A, Length 575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-204ENST00000519381 NISCHQ9Y2I1 1504 aa39.55■■■■□ 3.92
VPS37A-204ENST00000519381 CCDC180Q9P1Z9 1646 aa35.57■■■■□ 3.28
VPS37A-204ENST00000519381 ABCC9O60706 1549 aa35.57■■■■□ 3.28
VPS37A-204ENST00000519381 RB1CC1Q8TDY2 1594 aa33.89■■■■□ 3.02
VPS37A-204ENST00000519381 NACADO15069 1562 aa33.61■■■□□ 2.97
VPS37A-204ENST00000519381 DCAF8L2P0C7V8 631 aa33.53■■■□□ 2.96
VPS37A-204ENST00000519381 DNAJC5BQ9UF47 199 aa33.18■■■□□ 2.9
VPS37A-204ENST00000519381 MYO15BQ96JP2 1530 aa33.08■■■□□ 2.89
VPS37A-204ENST00000519381 PABPN1Q86U42 306 aaKnown RBP eCLIP33.08■■■□□ 2.89
VPS37A-204ENST00000519381 UNC13AQ9UPW8 1703 aa33.03■■■□□ 2.88
VPS37A-204ENST00000519381 ZCCHC6Q5VYS8 1495 aaKnown RBP32.79■■■□□ 2.84
VPS37A-204ENST00000519381 BICRAQ9NZM4 1560 aa32.75■■■□□ 2.83
VPS37A-204ENST00000519381 DCAF1Q9Y4B6 1507 aa32.67■■■□□ 2.82
VPS37A-204ENST00000519381 SCRIBQ14160 1630 aa32.44■■■□□ 2.78
VPS37A-204ENST00000519381 SHROOM4Q9ULL8 1493 aa32.43■■■□□ 2.78
VPS37A-204ENST00000519381 CC2D2AQ9P2K1 1620 aa32.11■■■□□ 2.73
VPS37A-204ENST00000519381 CECR2Q9BXF3 1484 aa32.04■■■□□ 2.72
VPS37A-204ENST00000519381 EIF4G1Q04637 1599 aaKnown RBP32.04■■■□□ 2.72
VPS37A-204ENST00000519381 NCAPD3P42695 1498 aa30.96■■■□□ 2.55
VPS37A-204ENST00000519381 SMARCA4P51532 1647 aa30.9■■■□□ 2.54
VPS37A-204ENST00000519381 SMARCA2P51531 1590 aa30.89■■■□□ 2.54
VPS37A-204ENST00000519381 ATAD2BQ9ULI0 1458 aa30.88■■■□□ 2.53
VPS37A-204ENST00000519381 ERCC6Q03468 1493 aa30.82■■■□□ 2.52
VPS37A-204ENST00000519381 HMGXB3Q12766 1538 aa30.8■■■□□ 2.52
VPS37A-204ENST00000519381 BAZ1AQ9NRL2 1556 aaPredicted RBP30.77■■■□□ 2.52
VPS37A-204ENST00000519381 BAZ1BQ9UIG0 1483 aaKnown RBP30.68■■■□□ 2.5
VPS37A-204ENST00000519381 CUX2O14529 1486 aa30.67■■■□□ 2.5
VPS37A-204ENST00000519381 DNAJC5Q9H3Z4 198 aa30.57■■■□□ 2.48
VPS37A-204ENST00000519381 PEG3Q9GZU2 1588 aa30.54■■■□□ 2.48
VPS37A-204ENST00000519381 NESP48681 1621 aa30.49■■■□□ 2.47
VPS37A-204ENST00000519381 MROH2BQ7Z745 1585 aa30.46■■■□□ 2.47
VPS37A-204ENST00000519381 LAMC3Q9Y6N6 1575 aa30.35■■■□□ 2.45
VPS37A-204ENST00000519381 THOC2Q8NI27 1593 aaKnown RBP30.21■■■□□ 2.43
VPS37A-204ENST00000519381 PDS5BQ9NTI5 1447 aa30.2■■■□□ 2.42
VPS37A-204ENST00000519381 KIF21AQ7Z4S6 1674 aa30.16■■■□□ 2.42
VPS37A-204ENST00000519381 WIZO95785 1651 aa30.13■■■□□ 2.41
VPS37A-204ENST00000519381 CADPSQ9ULU8 1353 aa30.05■■■□□ 2.4
VPS37A-204ENST00000519381 MRC2Q9UBG0 1479 aa29.93■■■□□ 2.38
VPS37A-204ENST00000519381 CEP164Q9UPV0 1460 aa29.84■■■□□ 2.37
VPS37A-204ENST00000519381 RSF1Q96T23 1441 aaPredicted RBP29.82■■■□□ 2.36
VPS37A-204ENST00000519381 WDR62O43379 1518 aa29.81■■■□□ 2.36
VPS37A-204ENST00000519381 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
VPS37A-204ENST00000519381 FANCD2Q9BXW9 1451 aa29.75■■■□□ 2.35
VPS37A-204ENST00000519381 CFTRP13569 1480 aa29.69■■■□□ 2.34
VPS37A-204ENST00000519381 PRDM2Q13029 1718 aa29.49■■■□□ 2.31
VPS37A-204ENST00000519381 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.31
VPS37A-204ENST00000519381 CCDC88BA6NC98 1476 aa29.39■■■□□ 2.3
VPS37A-204ENST00000519381 TRIM41Q8WV44 630 aa29.37■■■□□ 2.29
VPS37A-204ENST00000519381 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
VPS37A-204ENST00000519381 IFT140Q96RY7 1462 aa29.21■■■□□ 2.27
VPS37A-204ENST00000519381 TOPBP1Q92547 1522 aa29.17■■■□□ 2.26
VPS37A-204ENST00000519381 ABCC8Q09428 1581 aa29.16■■■□□ 2.26
VPS37A-204ENST00000519381 DNMBPQ6XZF7 1577 aa29.09■■■□□ 2.25
VPS37A-204ENST00000519381 ZNF608Q9ULD9 1512 aaPredicted RBP29.09■■■□□ 2.25
VPS37A-204ENST00000519381 EIF4G3O43432 1585 aaKnown RBP29.01■■■□□ 2.23
VPS37A-204ENST00000519381 RIMBP3CA6NJZ7 1639 aa28.88■■■□□ 2.21
VPS37A-204ENST00000519381 RIMBP3BA6NNM3 1639 aa28.88■■■□□ 2.21
VPS37A-204ENST00000519381 RIMBP3Q9UFD9 1639 aa28.88■■■□□ 2.21
VPS37A-204ENST00000519381 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
VPS37A-204ENST00000519381 POLA1P09884 1462 aaPredicted RBP28.86■■■□□ 2.21
VPS37A-204ENST00000519381 AQRO60306 1485 aaKnown RBP eCLIP28.85■■■□□ 2.21
VPS37A-204ENST00000519381 CHD1O14646 1710 aa28.8■■■□□ 2.2
VPS37A-204ENST00000519381 FBLN2P98095 1184 aa28.79■■■□□ 2.2
VPS37A-204ENST00000519381 ARHGEF11O15085 1522 aa28.78■■■□□ 2.2
VPS37A-204ENST00000519381 SOGA1O94964 1423 aa28.76■■■□□ 2.19
VPS37A-204ENST00000519381 RAD54L2Q9Y4B4 1467 aa28.74■■■□□ 2.19
VPS37A-204ENST00000519381 FGD5Q6ZNL6 1462 aa28.71■■■□□ 2.19
VPS37A-204ENST00000519381 TDRD9Q8NDG6 1382 aaKnown RBP28.68■■■□□ 2.18
VPS37A-204ENST00000519381 WDR97A6NE52 1622 aa28.67■■■□□ 2.18
VPS37A-204ENST00000519381 CUX1P39880 1505 aa28.64■■■□□ 2.17
VPS37A-204ENST00000519381 SUPT5HO00267 1087 aaKnown RBP28.62■■■□□ 2.17
VPS37A-204ENST00000519381 SNAPC4Q5SXM2 1469 aa28.61■■■□□ 2.17
VPS37A-204ENST00000519381 CYB5RLQ6IPT4 315 aa28.59■■■□□ 2.17
VPS37A-204ENST00000519381 CHMP7Q8WUX9 453 aaPredicted RBP28.55■■■□□ 2.16
VPS37A-204ENST00000519381 MAGI1Q96QZ7 1491 aaPredicted RBP28.54■■■□□ 2.16
VPS37A-204ENST00000519381 GRIN2BQ13224 1484 aa28.53■■■□□ 2.16
VPS37A-204ENST00000519381 SYNJ1O43426 1573 aa28.5■■■□□ 2.15
VPS37A-204ENST00000519381 ARAP1Q96P48 1450 aa28.47■■■□□ 2.15
VPS37A-204ENST00000519381 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
VPS37A-204ENST00000519381 SYNJ2O15056 1496 aa28.43■■■□□ 2.14
VPS37A-204ENST00000519381 GAPVD1Q14C86 1478 aa28.42■■■□□ 2.14
VPS37A-204ENST00000519381 CLASP1Q7Z460 1538 aa28.4■■■□□ 2.14
VPS37A-204ENST00000519381 TRHP20396 242 aaPredicted RBP28.37■■■□□ 2.13
VPS37A-204ENST00000519381 ABCA10Q8WWZ4 1543 aa28.36■■■□□ 2.13
VPS37A-204ENST00000519381 ABCA5Q8WWZ7 1642 aa28.32■■■□□ 2.12
VPS37A-204ENST00000519381 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
VPS37A-204ENST00000519381 TOP2BQ02880 1626 aa28.21■■■□□ 2.11
VPS37A-204ENST00000519381 BIVM-ERCC5R4GMW8 1640 aa28.21■■■□□ 2.11
VPS37A-204ENST00000519381 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
VPS37A-204ENST00000519381 ADAMTS12P58397 1594 aa28.15■■■□□ 2.1
VPS37A-204ENST00000519381 FHAD1B1AJZ9 1412 aa28.06■■■□□ 2.08
VPS37A-204ENST00000519381 ERICH3Q5RHP9 1530 aa28.03■■■□□ 2.08
VPS37A-204ENST00000519381 CEP170Q5SW79 1584 aa28.03■■■□□ 2.08
VPS37A-204ENST00000519381 NUP160Q12769 1436 aa28.01■■■□□ 2.07
VPS37A-204ENST00000519381 ERCC6L2Q5T890 1561 aa27.94■■■□□ 2.06
VPS37A-204ENST00000519381 SHROOM2Q13796 1616 aa27.89■■■□□ 2.05
VPS37A-204ENST00000519381 PRG4Q92954 1404 aaPredicted RBP27.79■■■□□ 2.04
VPS37A-204ENST00000519381 RUSC2Q8N2Y8 1516 aa27.75■■■□□ 2.03
VPS37A-204ENST00000519381 JPH4Q96JJ6 628 aa27.74■■■□□ 2.03
VPS37A-204ENST00000519381 KIF27Q86VH2 1401 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms