RNA–Protein interactions for RNA: ENST00000468860.1

ABCD3-204, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 3

Gene ABCD3, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-204ENST00000468860 NISCHQ9Y2I1 1504 aa44.65■■■■■ 4.74
ABCD3-204ENST00000468860 CCDC180Q9P1Z9 1646 aa39.88■■■■□ 3.97
ABCD3-204ENST00000468860 ABCC9O60706 1549 aa39.26■■■■□ 3.88
ABCD3-204ENST00000468860 RB1CC1Q8TDY2 1594 aa37.67■■■■□ 3.62
ABCD3-204ENST00000468860 NACADO15069 1562 aa37.55■■■■□ 3.6
ABCD3-204ENST00000468860 DCAF8L2P0C7V8 631 aa37.35■■■■□ 3.57
ABCD3-204ENST00000468860 MYO15BQ96JP2 1530 aa37.22■■■■□ 3.55
ABCD3-204ENST00000468860 ZCCHC6Q5VYS8 1495 aaKnown RBP37.13■■■■□ 3.53
ABCD3-204ENST00000468860 DCAF1Q9Y4B6 1507 aa36.94■■■■□ 3.5
ABCD3-204ENST00000468860 UNC13AQ9UPW8 1703 aa36.87■■■■□ 3.49
ABCD3-204ENST00000468860 PABPN1Q86U42 306 aaKnown RBP eCLIP36.6■■■■□ 3.45
ABCD3-204ENST00000468860 BICRAQ9NZM4 1560 aa36.54■■■■□ 3.44
ABCD3-204ENST00000468860 SCRIBQ14160 1630 aa36.32■■■■□ 3.4
ABCD3-204ENST00000468860 DNAJC5BQ9UF47 199 aa36.3■■■■□ 3.4
ABCD3-204ENST00000468860 SHROOM4Q9ULL8 1493 aa36.13■■■■□ 3.37
ABCD3-204ENST00000468860 EIF4G1Q04637 1599 aaKnown RBP35.59■■■■□ 3.29
ABCD3-204ENST00000468860 CC2D2AQ9P2K1 1620 aa35.54■■■■□ 3.28
ABCD3-204ENST00000468860 CECR2Q9BXF3 1484 aa35.32■■■■□ 3.24
ABCD3-204ENST00000468860 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
ABCD3-204ENST00000468860 BAZ1AQ9NRL2 1556 aaPredicted RBP34.63■■■■□ 3.13
ABCD3-204ENST00000468860 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
ABCD3-204ENST00000468860 ATAD2BQ9ULI0 1458 aa34.59■■■■□ 3.13
ABCD3-204ENST00000468860 SMARCA2P51531 1590 aa34.55■■■■□ 3.12
ABCD3-204ENST00000468860 HMGXB3Q12766 1538 aa34.45■■■■□ 3.1
ABCD3-204ENST00000468860 PEG3Q9GZU2 1588 aa34.4■■■■□ 3.1
ABCD3-204ENST00000468860 MROH2BQ7Z745 1585 aa34.4■■■■□ 3.1
ABCD3-204ENST00000468860 BAZ1BQ9UIG0 1483 aaKnown RBP34.29■■■■□ 3.08
ABCD3-204ENST00000468860 WIZO95785 1651 aa34.03■■■■□ 3.04
ABCD3-204ENST00000468860 NESP48681 1621 aa33.89■■■■□ 3.02
ABCD3-204ENST00000468860 ERCC6Q03468 1493 aa33.87■■■■□ 3.01
ABCD3-204ENST00000468860 RSF1Q96T23 1441 aaPredicted RBP33.87■■■■□ 3.01
ABCD3-204ENST00000468860 LAMC3Q9Y6N6 1575 aa33.79■■■■□ 3
ABCD3-204ENST00000468860 TOP2AP11388 1531 aaKnown RBP33.64■■■□□ 2.98
ABCD3-204ENST00000468860 CUX2O14529 1486 aa33.64■■■□□ 2.98
ABCD3-204ENST00000468860 CADPSQ9ULU8 1353 aa33.59■■■□□ 2.97
ABCD3-204ENST00000468860 PDS5BQ9NTI5 1447 aa33.53■■■□□ 2.96
ABCD3-204ENST00000468860 KIF21AQ7Z4S6 1674 aa33.53■■■□□ 2.96
ABCD3-204ENST00000468860 THOC2Q8NI27 1593 aaKnown RBP33.49■■■□□ 2.95
ABCD3-204ENST00000468860 CFTRP13569 1480 aa33.33■■■□□ 2.93
ABCD3-204ENST00000468860 CCDC88BA6NC98 1476 aa33.23■■■□□ 2.91
ABCD3-204ENST00000468860 MRC2Q9UBG0 1479 aa33.23■■■□□ 2.91
ABCD3-204ENST00000468860 FANCD2Q9BXW9 1451 aa33.21■■■□□ 2.91
ABCD3-204ENST00000468860 CEP164Q9UPV0 1460 aa33.2■■■□□ 2.91
ABCD3-204ENST00000468860 WDR62O43379 1518 aa33.15■■■□□ 2.9
ABCD3-204ENST00000468860 PRDM2Q13029 1718 aa33.14■■■□□ 2.9
ABCD3-204ENST00000468860 DNAJC5Q9H3Z4 198 aa32.96■■■□□ 2.87
ABCD3-204ENST00000468860 URB2Q14146 1524 aaKnown RBP32.91■■■□□ 2.86
ABCD3-204ENST00000468860 SUPT5HO00267 1087 aaKnown RBP32.72■■■□□ 2.83
ABCD3-204ENST00000468860 TOPBP1Q92547 1522 aa32.66■■■□□ 2.82
ABCD3-204ENST00000468860 ABCC8Q09428 1581 aa32.63■■■□□ 2.81
ABCD3-204ENST00000468860 DNMBPQ6XZF7 1577 aa32.61■■■□□ 2.81
ABCD3-204ENST00000468860 IFT140Q96RY7 1462 aa32.52■■■□□ 2.8
ABCD3-204ENST00000468860 ZNF608Q9ULD9 1512 aaPredicted RBP32.4■■■□□ 2.78
ABCD3-204ENST00000468860 POLA1P09884 1462 aaPredicted RBP32.35■■■□□ 2.77
ABCD3-204ENST00000468860 TARBP1Q13395 1621 aaKnown RBP32.34■■■□□ 2.77
ABCD3-204ENST00000468860 EIF4G3O43432 1585 aaKnown RBP32.29■■■□□ 2.76
ABCD3-204ENST00000468860 CUX1P39880 1505 aa32.29■■■□□ 2.76
ABCD3-204ENST00000468860 FGD5Q6ZNL6 1462 aa32.23■■■□□ 2.75
ABCD3-204ENST00000468860 RAD54L2Q9Y4B4 1467 aa32.2■■■□□ 2.75
ABCD3-204ENST00000468860 SOGA1O94964 1423 aa32.19■■■□□ 2.74
ABCD3-204ENST00000468860 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.74
ABCD3-204ENST00000468860 OSCARQ8IYS5 282 aa32.15■■■□□ 2.74
ABCD3-204ENST00000468860 WDR97A6NE52 1622 aa32.08■■■□□ 2.73
ABCD3-204ENST00000468860 TDRD9Q8NDG6 1382 aaKnown RBP32.04■■■□□ 2.72
ABCD3-204ENST00000468860 CHD1O14646 1710 aa31.97■■■□□ 2.71
ABCD3-204ENST00000468860 BIVM-ERCC5R4GMW8 1640 aa31.97■■■□□ 2.71
ABCD3-204ENST00000468860 WRNQ14191 1432 aaPredicted RBP eCLIP31.94■■■□□ 2.7
ABCD3-204ENST00000468860 TOP2BQ02880 1626 aa31.94■■■□□ 2.7
ABCD3-204ENST00000468860 SYNJ1O43426 1573 aa31.91■■■□□ 2.7
ABCD3-204ENST00000468860 ABCA10Q8WWZ4 1543 aa31.9■■■□□ 2.7
ABCD3-204ENST00000468860 GRIN2BQ13224 1484 aa31.87■■■□□ 2.69
ABCD3-204ENST00000468860 SNAPC4Q5SXM2 1469 aa31.87■■■□□ 2.69
ABCD3-204ENST00000468860 PBRM1Q86U86 1689 aa31.84■■■□□ 2.69
ABCD3-204ENST00000468860 ABCA5Q8WWZ7 1642 aa31.83■■■□□ 2.69
ABCD3-204ENST00000468860 GAPVD1Q14C86 1478 aa31.83■■■□□ 2.69
ABCD3-204ENST00000468860 MAGI1Q96QZ7 1491 aaPredicted RBP31.83■■■□□ 2.69
ABCD3-204ENST00000468860 FBLN2P98095 1184 aa31.81■■■□□ 2.68
ABCD3-204ENST00000468860 RIMBP3CA6NJZ7 1639 aa31.73■■■□□ 2.67
ABCD3-204ENST00000468860 RIMBP3BA6NNM3 1639 aa31.73■■■□□ 2.67
ABCD3-204ENST00000468860 RIMBP3Q9UFD9 1639 aa31.73■■■□□ 2.67
ABCD3-204ENST00000468860 TRIM41Q8WV44 630 aa31.72■■■□□ 2.67
ABCD3-204ENST00000468860 SYNJ2O15056 1496 aa31.71■■■□□ 2.67
ABCD3-204ENST00000468860 CHMP7Q8WUX9 453 aaPredicted RBP31.68■■■□□ 2.66
ABCD3-204ENST00000468860 ARHGEF11O15085 1522 aa31.68■■■□□ 2.66
ABCD3-204ENST00000468860 CLASP1Q7Z460 1538 aa31.59■■■□□ 2.65
ABCD3-204ENST00000468860 ADAMTS12P58397 1594 aa31.55■■■□□ 2.64
ABCD3-204ENST00000468860 ERICH3Q5RHP9 1530 aa31.53■■■□□ 2.64
ABCD3-204ENST00000468860 GRIN2AQ12879 1464 aa31.46■■■□□ 2.63
ABCD3-204ENST00000468860 FHAD1B1AJZ9 1412 aa31.45■■■□□ 2.63
ABCD3-204ENST00000468860 ARAP1Q96P48 1450 aa31.4■■■□□ 2.62
ABCD3-204ENST00000468860 CYB5RLQ6IPT4 315 aa31.35■■■□□ 2.61
ABCD3-204ENST00000468860 NUP160Q12769 1436 aa31.34■■■□□ 2.61
ABCD3-204ENST00000468860 CEP170Q5SW79 1584 aa31.34■■■□□ 2.61
ABCD3-204ENST00000468860 KIF27Q86VH2 1401 aa31.3■■■□□ 2.6
ABCD3-204ENST00000468860 IGF1RP08069 1367 aa31.2■■■□□ 2.59
ABCD3-204ENST00000468860 CUL7Q14999 1698 aa31.19■■■□□ 2.58
ABCD3-204ENST00000468860 SHROOM2Q13796 1616 aa31.17■■■□□ 2.58
ABCD3-204ENST00000468860 ERCC6L2Q5T890 1561 aa31.12■■■□□ 2.57
ABCD3-204ENST00000468860 RUSC2Q8N2Y8 1516 aa31.09■■■□□ 2.57
ABCD3-204ENST00000468860 CARMIL1Q5VZK9 1371 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms