RNA–Protein interactions for RNA: ENST00000555070.1

AL137230.2-201, humanhuman

TSL 3 BASIC

Gene AL137230.2, Length 452 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL137230.2-201ENST00000555070 NISCHQ9Y2I1 1504 aa20.3■□□□□ 0.84
AL137230.2-201ENST00000555070 ABCC9O60706 1549 aa18.16■□□□□ 0.5
AL137230.2-201ENST00000555070 CCDC180Q9P1Z9 1646 aa18.13■□□□□ 0.49
AL137230.2-201ENST00000555070 DCAF8L2P0C7V8 631 aa17.26■□□□□ 0.35
AL137230.2-201ENST00000555070 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
AL137230.2-201ENST00000555070 NACADO15069 1562 aa17.14■□□□□ 0.33
AL137230.2-201ENST00000555070 PABPN1Q86U42 306 aaKnown RBP eCLIP16.95■□□□□ 0.3
AL137230.2-201ENST00000555070 DNAJC5BQ9UF47 199 aa16.91■□□□□ 0.3
AL137230.2-201ENST00000555070 MYO15BQ96JP2 1530 aa16.87■□□□□ 0.29
AL137230.2-201ENST00000555070 ZCCHC6Q5VYS8 1495 aaKnown RBP16.84■□□□□ 0.29
AL137230.2-201ENST00000555070 UNC13AQ9UPW8 1703 aa16.82■□□□□ 0.28
AL137230.2-201ENST00000555070 BICRAQ9NZM4 1560 aa16.72■□□□□ 0.27
AL137230.2-201ENST00000555070 DCAF1Q9Y4B6 1507 aa16.71■□□□□ 0.27
AL137230.2-201ENST00000555070 SCRIBQ14160 1630 aa16.63■□□□□ 0.25
AL137230.2-201ENST00000555070 SHROOM4Q9ULL8 1493 aa16.48■□□□□ 0.23
AL137230.2-201ENST00000555070 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
AL137230.2-201ENST00000555070 EIF4G1Q04637 1599 aaKnown RBP16.33■□□□□ 0.2
AL137230.2-201ENST00000555070 CECR2Q9BXF3 1484 aa16.32■□□□□ 0.2
AL137230.2-201ENST00000555070 NCAPD3P42695 1498 aa15.82■□□□□ 0.12
AL137230.2-201ENST00000555070 ATAD2BQ9ULI0 1458 aa15.82■□□□□ 0.12
AL137230.2-201ENST00000555070 SMARCA4P51532 1647 aa15.82■□□□□ 0.12
AL137230.2-201ENST00000555070 SMARCA2P51531 1590 aa15.77■□□□□ 0.11
AL137230.2-201ENST00000555070 BAZ1AQ9NRL2 1556 aaPredicted RBP15.76■□□□□ 0.11
AL137230.2-201ENST00000555070 HMGXB3Q12766 1538 aa15.71■□□□□ 0.11
AL137230.2-201ENST00000555070 BAZ1BQ9UIG0 1483 aaKnown RBP15.7■□□□□ 0.1
AL137230.2-201ENST00000555070 ERCC6Q03468 1493 aa15.68■□□□□ 0.1
AL137230.2-201ENST00000555070 MROH2BQ7Z745 1585 aa15.67■□□□□ 0.1
AL137230.2-201ENST00000555070 NESP48681 1621 aa15.61■□□□□ 0.09
AL137230.2-201ENST00000555070 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
AL137230.2-201ENST00000555070 CUX2O14529 1486 aa15.53■□□□□ 0.08
AL137230.2-201ENST00000555070 WIZO95785 1651 aa15.48■□□□□ 0.07
AL137230.2-201ENST00000555070 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
AL137230.2-201ENST00000555070 DNAJC5Q9H3Z4 198 aa15.43■□□□□ 0.06
AL137230.2-201ENST00000555070 PDS5BQ9NTI5 1447 aa15.4■□□□□ 0.06
AL137230.2-201ENST00000555070 CADPSQ9ULU8 1353 aa15.38■□□□□ 0.05
AL137230.2-201ENST00000555070 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
AL137230.2-201ENST00000555070 THOC2Q8NI27 1593 aaKnown RBP15.37■□□□□ 0.05
AL137230.2-201ENST00000555070 KIF21AQ7Z4S6 1674 aa15.37■□□□□ 0.05
AL137230.2-201ENST00000555070 TOP2AP11388 1531 aaKnown RBP15.28■□□□□ 0.04
AL137230.2-201ENST00000555070 MRC2Q9UBG0 1479 aa15.27■□□□□ 0.03
AL137230.2-201ENST00000555070 CEP164Q9UPV0 1460 aa15.24■□□□□ 0.03
AL137230.2-201ENST00000555070 FANCD2Q9BXW9 1451 aa15.23■□□□□ 0.03
AL137230.2-201ENST00000555070 CFTRP13569 1480 aa15.2■□□□□ 0.02
AL137230.2-201ENST00000555070 WDR62O43379 1518 aa15.19■□□□□ 0.02
AL137230.2-201ENST00000555070 SUPT5HO00267 1087 aaKnown RBP15.15■□□□□ 0.02
AL137230.2-201ENST00000555070 CCDC88BA6NC98 1476 aa15.13■□□□□ 0.01
AL137230.2-201ENST00000555070 URB2Q14146 1524 aaKnown RBP15.08■□□□□ 0.01
AL137230.2-201ENST00000555070 PRDM2Q13029 1718 aa15.01□□□□□ -0.01
AL137230.2-201ENST00000555070 TOPBP1Q92547 1522 aa14.93□□□□□ -0.02
AL137230.2-201ENST00000555070 TRIM41Q8WV44 630 aa14.93□□□□□ -0.02
AL137230.2-201ENST00000555070 IFT140Q96RY7 1462 aa14.9□□□□□ -0.02
AL137230.2-201ENST00000555070 OSCARQ8IYS5 282 aa14.9□□□□□ -0.02
AL137230.2-201ENST00000555070 ZNF608Q9ULD9 1512 aaPredicted RBP14.9□□□□□ -0.02
AL137230.2-201ENST00000555070 ABCC8Q09428 1581 aa14.88□□□□□ -0.03
AL137230.2-201ENST00000555070 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
AL137230.2-201ENST00000555070 EIF4G3O43432 1585 aaKnown RBP14.8□□□□□ -0.04
AL137230.2-201ENST00000555070 AQRO60306 1485 aaKnown RBP eCLIP14.79□□□□□ -0.04
AL137230.2-201ENST00000555070 POLA1P09884 1462 aaPredicted RBP14.79□□□□□ -0.04
AL137230.2-201ENST00000555070 RAD54L2Q9Y4B4 1467 aa14.76□□□□□ -0.05
AL137230.2-201ENST00000555070 FBLN2P98095 1184 aa14.76□□□□□ -0.05
AL137230.2-201ENST00000555070 TARBP1Q13395 1621 aaKnown RBP14.76□□□□□ -0.05
AL137230.2-201ENST00000555070 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
AL137230.2-201ENST00000555070 SOGA1O94964 1423 aa14.75□□□□□ -0.05
AL137230.2-201ENST00000555070 TDRD9Q8NDG6 1382 aaKnown RBP14.73□□□□□ -0.05
AL137230.2-201ENST00000555070 FGD5Q6ZNL6 1462 aa14.73□□□□□ -0.05
AL137230.2-201ENST00000555070 CUX1P39880 1505 aa14.72□□□□□ -0.05
AL137230.2-201ENST00000555070 RIMBP3CA6NJZ7 1639 aa14.66□□□□□ -0.06
AL137230.2-201ENST00000555070 RIMBP3BA6NNM3 1639 aa14.66□□□□□ -0.06
AL137230.2-201ENST00000555070 RIMBP3Q9UFD9 1639 aa14.66□□□□□ -0.06
AL137230.2-201ENST00000555070 CHD1O14646 1710 aa14.66□□□□□ -0.06
AL137230.2-201ENST00000555070 SNAPC4Q5SXM2 1469 aa14.64□□□□□ -0.07
AL137230.2-201ENST00000555070 ARHGEF11O15085 1522 aa14.64□□□□□ -0.07
AL137230.2-201ENST00000555070 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
AL137230.2-201ENST00000555070 GRIN2BQ13224 1484 aa14.59□□□□□ -0.07
AL137230.2-201ENST00000555070 CYB5RLQ6IPT4 315 aa14.58□□□□□ -0.08
AL137230.2-201ENST00000555070 WDR97A6NE52 1622 aa14.58□□□□□ -0.08
AL137230.2-201ENST00000555070 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
AL137230.2-201ENST00000555070 MAGI1Q96QZ7 1491 aaPredicted RBP14.57□□□□□ -0.08
AL137230.2-201ENST00000555070 ABCA10Q8WWZ4 1543 aa14.53□□□□□ -0.08
AL137230.2-201ENST00000555070 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
AL137230.2-201ENST00000555070 SYNJ2O15056 1496 aa14.52□□□□□ -0.08
AL137230.2-201ENST00000555070 PBRM1Q86U86 1689 aa14.52□□□□□ -0.09
AL137230.2-201ENST00000555070 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
AL137230.2-201ENST00000555070 ARAP1Q96P48 1450 aa14.5□□□□□ -0.09
AL137230.2-201ENST00000555070 ABCA5Q8WWZ7 1642 aa14.49□□□□□ -0.09
AL137230.2-201ENST00000555070 TOP2BQ02880 1626 aa14.48□□□□□ -0.09
AL137230.2-201ENST00000555070 CLASP1Q7Z460 1538 aa14.48□□□□□ -0.09
AL137230.2-201ENST00000555070 BIVM-ERCC5R4GMW8 1640 aa14.47□□□□□ -0.09
AL137230.2-201ENST00000555070 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
AL137230.2-201ENST00000555070 ADAMTS12P58397 1594 aa14.4□□□□□ -0.1
AL137230.2-201ENST00000555070 GRIN2AQ12879 1464 aa14.4□□□□□ -0.1
AL137230.2-201ENST00000555070 FHAD1B1AJZ9 1412 aa14.37□□□□□ -0.11
AL137230.2-201ENST00000555070 ERICH3Q5RHP9 1530 aa14.35□□□□□ -0.11
AL137230.2-201ENST00000555070 CEP170Q5SW79 1584 aa14.34□□□□□ -0.11
AL137230.2-201ENST00000555070 NUP160Q12769 1436 aa14.32□□□□□ -0.12
AL137230.2-201ENST00000555070 ERCC6L2Q5T890 1561 aa14.3□□□□□ -0.12
AL137230.2-201ENST00000555070 KIF27Q86VH2 1401 aa14.24□□□□□ -0.13
AL137230.2-201ENST00000555070 PRG4Q92954 1404 aaPredicted RBP14.24□□□□□ -0.13
AL137230.2-201ENST00000555070 SHROOM2Q13796 1616 aa14.23□□□□□ -0.13
AL137230.2-201ENST00000555070 JPH4Q96JJ6 628 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms