RNA–Protein interactions for RNA: ENST00000285670.6

SAMSN1-201, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 2,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-201ENST00000285670 AEBP2Q6ZN18 517 aaPredicted RBP15.68■□□□□ 0.1
SAMSN1-201ENST00000285670 CHIC1Q5VXU3 224 aa14.75□□□□□ -0.05
SAMSN1-201ENST00000285670 SENP3Q9H4L4 574 aaPredicted RBP13.52□□□□□ -0.24
SAMSN1-201ENST00000285670 PHF23Q9BUL5 403 aaPredicted RBP13.23□□□□□ -0.29
SAMSN1-201ENST00000285670 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
SAMSN1-201ENST00000285670 FOXD1Q16676 465 aa12.56□□□□□ -0.4
SAMSN1-201ENST00000285670 MSH5O43196 834 aa11.97□□□□□ -0.49
SAMSN1-201ENST00000285670 PIAS4Q8N2W9 510 aaPredicted RBP11.68□□□□□ -0.54
SAMSN1-201ENST00000285670 PLPPR3Q6T4P5 718 aa11.59□□□□□ -0.55
SAMSN1-201ENST00000285670 PPP6R1Q9UPN7 881 aa11.45□□□□□ -0.58
SAMSN1-201ENST00000285670 ADRA2BP18089 450 aa11.41□□□□□ -0.58
SAMSN1-201ENST00000285670 DMRT2Q9Y5R5 561 aa10.66□□□□□ -0.7
SAMSN1-201ENST00000285670 SCAF1Q9H7N4 1312 aaKnown RBP10.56□□□□□ -0.72
SAMSN1-201ENST00000285670 MAPK8IP2Q13387 824 aaPredicted RBP10.55□□□□□ -0.72
SAMSN1-201ENST00000285670 CACNB1Q02641 598 aaPredicted RBP10.39□□□□□ -0.75
SAMSN1-201ENST00000285670 DCAF8L1A6NGE4 600 aa10.15□□□□□ -0.78
SAMSN1-201ENST00000285670 HOXD11P31277 338 aaPredicted RBP10.15□□□□□ -0.78
SAMSN1-201ENST00000285670 RNF39Q9H2S5 420 aa10.14□□□□□ -0.79
SAMSN1-201ENST00000285670 PPP4R3CPQ6ZMV5 832 aa10.08□□□□□ -0.8
SAMSN1-201ENST00000285670 C1QBPQ07021 282 aaKnown RBP10.01□□□□□ -0.81
SAMSN1-201ENST00000285670 CNKSR2Q8WXI2 1034 aa10□□□□□ -0.81
SAMSN1-201ENST00000285670 RNF216Q9NWF9 866 aaPredicted RBP10□□□□□ -0.81
SAMSN1-201ENST00000285670 DNAJC5BQ9UF47 199 aa9.95□□□□□ -0.82
SAMSN1-201ENST00000285670 POTEHQ6S545 545 aa9.73□□□□□ -0.85
SAMSN1-201ENST00000285670 NCBP3Q53F19 620 aaKnown RBP9.66□□□□□ -0.86
SAMSN1-201ENST00000285670 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.63□□□□□ -0.872e-8■□□□□ 9.9
SAMSN1-201ENST00000285670 NPM3O75607 178 aaKnown RBP9.45□□□□□ -0.9
SAMSN1-201ENST00000285670 U3KPZ7 1027 aaPredicted RBP9.4□□□□□ -0.91
SAMSN1-201ENST00000285670 DSG3P32926 999 aa9.37□□□□□ -0.91
SAMSN1-201ENST00000285670 CAPN15O75808 1086 aa9.34□□□□□ -0.91
SAMSN1-201ENST00000285670 SPINK5Q9NQ38 1064 aaPredicted RBP9.3□□□□□ -0.92
SAMSN1-201ENST00000285670 APLP2Q06481 763 aa9.23□□□□□ -0.93
SAMSN1-201ENST00000285670 ZNF219Q9P2Y4 722 aaPredicted RBP9.16□□□□□ -0.94
SAMSN1-201ENST00000285670 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.1□□□□□ -0.95
SAMSN1-201ENST00000285670 HNRNPUL2Q1KMD3 747 aaKnown RBP9.1□□□□□ -0.95
SAMSN1-201ENST00000285670 SLC4A2P04920 1241 aa9.09□□□□□ -0.95
SAMSN1-201ENST00000285670 TRHP20396 242 aaPredicted RBP9.09□□□□□ -0.95
SAMSN1-201ENST00000285670 ABCB7O75027 752 aa9.06□□□□□ -0.96
SAMSN1-201ENST00000285670 RBM42Q9BTD8 480 aaKnown RBP9.03□□□□□ -0.96
SAMSN1-201ENST00000285670 SAMD1Q6SPF0 538 aaPredicted RBP9.02□□□□□ -0.97
SAMSN1-201ENST00000285670 KCNA4P22459 653 aa8.96□□□□□ -0.98
SAMSN1-201ENST00000285670 CHRDL2Q6WN34 429 aa8.89□□□□□ -0.99
SAMSN1-201ENST00000285670 NISCHQ9Y2I1 1504 aa8.86□□□□□ -0.99
SAMSN1-201ENST00000285670 MYCNP04198 464 aaPredicted RBP8.8□□□□□ -1
SAMSN1-201ENST00000285670 POLA2Q14181 598 aa8.78□□□□□ -1
SAMSN1-201ENST00000285670 SP7Q8TDD2 431 aaPredicted RBP8.73□□□□□ -1.01
SAMSN1-201ENST00000285670 AKT1S1Q96B36 256 aa8.73□□□□□ -1.01
SAMSN1-201ENST00000285670 ZBTB12Q9Y330 459 aaPredicted RBP8.71□□□□□ -1.02
SAMSN1-201ENST00000285670 REM2Q8IYK8 340 aaPredicted RBP8.6□□□□□ -1.03
SAMSN1-201ENST00000285670 PIP4P2Q8N4L2 257 aa8.6□□□□□ -1.03
SAMSN1-201ENST00000285670 OSCARQ8IYS5 282 aa8.53□□□□□ -1.04
SAMSN1-201ENST00000285670 FOXD4L1Q9NU39 408 aa8.53□□□□□ -1.04
SAMSN1-201ENST00000285670 FXR2P51116 673 aaKnown RBP eCLIP8.52□□□□□ -1.044e-7■□□□□ 8.9
SAMSN1-201ENST00000285670 PITPNM1O00562 1244 aa8.51□□□□□ -1.05
SAMSN1-201ENST00000285670 ATF5Q9Y2D1 282 aaPredicted RBP8.51□□□□□ -1.05
SAMSN1-201ENST00000285670 HAX1O00165 279 aa8.51□□□□□ -1.05
SAMSN1-201ENST00000285670 PLSCR2Q9NRY7 297 aa8.51□□□□□ -1.05
SAMSN1-201ENST00000285670 SLC4A1APQ9BWU0 796 aaKnown RBP8.44□□□□□ -1.06
SAMSN1-201ENST00000285670 SPDYE2BA6NHP3 402 aa8.37□□□□□ -1.07
SAMSN1-201ENST00000285670 SPDYE6P0CI01 402 aa8.37□□□□□ -1.07
SAMSN1-201ENST00000285670 SPDYE2Q495Y8 402 aa8.37□□□□□ -1.07
SAMSN1-201ENST00000285670 ATXN8OSP0DMR3 200 aa8.35□□□□□ -1.07
SAMSN1-201ENST00000285670 EVX2Q03828 476 aa8.32□□□□□ -1.08
SAMSN1-201ENST00000285670 FBLN2P98095 1184 aa8.32□□□□□ -1.08
SAMSN1-201ENST00000285670 SPDYE1Q8NFV5 336 aaPredicted RBP8.29□□□□□ -1.08
SAMSN1-201ENST00000285670 PRKAR2AP13861 404 aaKnown RBP8.28□□□□□ -1.08
SAMSN1-201ENST00000285670 C19orf67A6NJJ6 358 aa8.27□□□□□ -1.09
SAMSN1-201ENST00000285670 ZBTB22O15209 634 aa8.21□□□□□ -1.09
SAMSN1-201ENST00000285670 CLEC11AQ9Y240 323 aa8.21□□□□□ -1.09
SAMSN1-201ENST00000285670 SSUH2Q9Y2M2 353 aa8.21□□□□□ -1.09
SAMSN1-201ENST00000285670 GABBR2O75899 941 aa8.18□□□□□ -1.1
SAMSN1-201ENST00000285670 LHX8Q68G74 356 aa8.17□□□□□ -1.1
SAMSN1-201ENST00000285670 ZNF692Q9BU19 519 aaPredicted RBP8.16□□□□□ -1.1
SAMSN1-201ENST00000285670 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
SAMSN1-201ENST00000285670 CLCN6P51797 869 aa8.08□□□□□ -1.12
SAMSN1-201ENST00000285670 PRR29P0C7W0 189 aa8.07□□□□□ -1.12
SAMSN1-201ENST00000285670 CHADLQ6NUI6 762 aa8.07□□□□□ -1.12
SAMSN1-201ENST00000285670 PABPN1Q86U42 306 aaKnown RBP eCLIP8.03□□□□□ -1.12
SAMSN1-201ENST00000285670 CD44P16070 742 aaKnown RBP8.01□□□□□ -1.13
SAMSN1-201ENST00000285670 POTEIP0CG38 1075 aa7.98□□□□□ -1.13
SAMSN1-201ENST00000285670 FARP1Q9Y4F1 1045 aaPredicted RBP7.98□□□□□ -1.13
SAMSN1-201ENST00000285670 ZNF579Q8NAF0 562 aaKnown RBP7.92□□□□□ -1.14
SAMSN1-201ENST00000285670 DCBLD2Q96PD2 775 aa7.91□□□□□ -1.14
SAMSN1-201ENST00000285670 ZRANB1Q9UGI0 708 aa7.84□□□□□ -1.15
SAMSN1-201ENST00000285670 STAG3Q9UJ98 1225 aa7.82□□□□□ -1.16
SAMSN1-201ENST00000285670 CREBZFQ9NS37 354 aa7.8□□□□□ -1.16
SAMSN1-201ENST00000285670 GALR2O43603 387 aaPredicted RBP7.77□□□□□ -1.17
SAMSN1-201ENST00000285670 PAK3O75914 559 aaPredicted RBP7.77□□□□□ -1.17
SAMSN1-201ENST00000285670 OTUD5Q96G74 571 aa7.76□□□□□ -1.17
SAMSN1-201ENST00000285670 PCDH10Q9P2E7 1040 aa7.76□□□□□ -1.17
SAMSN1-201ENST00000285670 CCDC180Q9P1Z9 1646 aa7.73□□□□□ -1.17
SAMSN1-201ENST00000285670 NPM1P06748 294 aaKnown RBP eCLIP7.7□□□□□ -1.18
SAMSN1-201ENST00000285670 POTEMA6NI47 508 aa7.7□□□□□ -1.18
SAMSN1-201ENST00000285670 POTEB2H3BUK9 544 aa7.69□□□□□ -1.18
SAMSN1-201ENST00000285670 PHF12Q96QT6 1004 aa7.68□□□□□ -1.18
SAMSN1-201ENST00000285670 POTEGQ6S5H5 508 aa7.67□□□□□ -1.18
SAMSN1-201ENST00000285670 HRCP23327 699 aa7.66□□□□□ -1.18
SAMSN1-201ENST00000285670 ASTLQ6HA08 431 aaPredicted RBP7.64□□□□□ -1.19
SAMSN1-201ENST00000285670 MAMSTRQ6ZN01 415 aa7.64□□□□□ -1.19
SAMSN1-201ENST00000285670 SLC39A7Q92504 469 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms