RNA–Protein interactions for RNA: ENST00000328376.9

C3orf35-201, Transcript of chromosome 3 open reading frame 35, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene C3orf35, Length 1,859 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf35-201ENST00000328376 NISCHQ9Y2I1 1504 aa24.3■■□□□ 1.48
C3orf35-201ENST00000328376 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
C3orf35-201ENST00000328376 ZCCHC6Q5VYS8 1495 aaKnown RBP20.67■□□□□ 0.9
C3orf35-201ENST00000328376 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
C3orf35-201ENST00000328376 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
C3orf35-201ENST00000328376 HRCP23327 699 aa20.22■□□□□ 0.83
C3orf35-201ENST00000328376 MYO15BQ96JP2 1530 aa20.21■□□□□ 0.83
C3orf35-201ENST00000328376 CHIC1Q5VXU3 224 aa20.18■□□□□ 0.82
C3orf35-201ENST00000328376 DCAF1Q9Y4B6 1507 aa20.09■□□□□ 0.81
C3orf35-201ENST00000328376 PCGF6Q9BYE7 350 aa19.81■□□□□ 0.76
C3orf35-201ENST00000328376 DCAF8L2P0C7V8 631 aa19.67■□□□□ 0.74
C3orf35-201ENST00000328376 ABCC9O60706 1549 aa19.6■□□□□ 0.73
C3orf35-201ENST00000328376 PPARGC1BQ86YN6 1023 aaKnown RBP19.53■□□□□ 0.72
C3orf35-201ENST00000328376 TRIM26Q12899 539 aaPredicted RBP19.51■□□□□ 0.71
C3orf35-201ENST00000328376 LOC105371045A0A1W2PR82 267 aa19.45■□□□□ 0.7
C3orf35-201ENST00000328376 ZEB1P37275 1124 aaPredicted RBP19.35■□□□□ 0.69
C3orf35-201ENST00000328376 RSF1Q96T23 1441 aaPredicted RBP19.31■□□□□ 0.68
C3orf35-201ENST00000328376 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
C3orf35-201ENST00000328376 SCRIBQ14160 1630 aa19.2■□□□□ 0.66
C3orf35-201ENST00000328376 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
C3orf35-201ENST00000328376 PELP1Q8IZL8 1130 aaKnown RBP19.07■□□□□ 0.64
C3orf35-201ENST00000328376 NACADO15069 1562 aa18.95■□□□□ 0.62
C3orf35-201ENST00000328376 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
C3orf35-201ENST00000328376 EIF4G1Q04637 1599 aaKnown RBP18.83■□□□□ 0.6
C3orf35-201ENST00000328376 FAM9AQ8IZU1 332 aaPredicted RBP18.82■□□□□ 0.6
C3orf35-201ENST00000328376 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
C3orf35-201ENST00000328376 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
C3orf35-201ENST00000328376 WIZO95785 1651 aa18.78■□□□□ 0.6
C3orf35-201ENST00000328376 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.59
C3orf35-201ENST00000328376 WRNQ14191 1432 aaPredicted RBP eCLIP18.65■□□□□ 0.58
C3orf35-201ENST00000328376 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.56
C3orf35-201ENST00000328376 ACIN1Q9UKV3 1341 aaKnown RBP18.54■□□□□ 0.56
C3orf35-201ENST00000328376 CCER1Q8TC90 406 aaPredicted RBP18.54■□□□□ 0.56
C3orf35-201ENST00000328376 EHMT2Q96KQ7 1210 aa18.52■□□□□ 0.56
C3orf35-201ENST00000328376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.5■□□□□ 0.55
C3orf35-201ENST00000328376 EEA1Q15075 1411 aa18.48■□□□□ 0.55
C3orf35-201ENST00000328376 SMARCA4P51532 1647 aa18.47■□□□□ 0.55
C3orf35-201ENST00000328376 SMARCA2P51531 1590 aa18.46■□□□□ 0.55
C3orf35-201ENST00000328376 TNIKQ9UKE5 1360 aa18.45■□□□□ 0.54
C3orf35-201ENST00000328376 CEP162Q5TB80 1403 aa18.45■□□□□ 0.54
C3orf35-201ENST00000328376 ABCC8Q09428 1581 aa18.43■□□□□ 0.54
C3orf35-201ENST00000328376 CENPBP07199 599 aaPredicted RBP18.43■□□□□ 0.54
C3orf35-201ENST00000328376 CCDC88BA6NC98 1476 aa18.42■□□□□ 0.54
C3orf35-201ENST00000328376 DIEXFQ68CQ4 756 aaKnown RBP18.41■□□□□ 0.54
C3orf35-201ENST00000328376 NEUROD1Q13562 356 aa18.39■□□□□ 0.54
C3orf35-201ENST00000328376 GOLGA3Q08378 1498 aa18.3■□□□□ 0.52
C3orf35-201ENST00000328376 SOGA1O94964 1423 aa18.3■□□□□ 0.52
C3orf35-201ENST00000328376 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
C3orf35-201ENST00000328376 MYT1Q01538 1121 aa18.28■□□□□ 0.52
C3orf35-201ENST00000328376 GTF3C3Q9Y5Q9 886 aa18.26■□□□□ 0.51
C3orf35-201ENST00000328376 CSRNP3Q8WYN3 585 aa18.24■□□□□ 0.51
C3orf35-201ENST00000328376 ZNF316A6NFI3 1004 aaPredicted RBP18.23■□□□□ 0.51
C3orf35-201ENST00000328376 KIF21BO75037 1637 aa18.22■□□□□ 0.51
C3orf35-201ENST00000328376 RUSC2Q8N2Y8 1516 aa18.18■□□□□ 0.5
C3orf35-201ENST00000328376 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
C3orf35-201ENST00000328376 CEP164Q9UPV0 1460 aa18.16■□□□□ 0.5
C3orf35-201ENST00000328376 UBTFP17480 764 aaKnown RBP18.12■□□□□ 0.49
C3orf35-201ENST00000328376 BAZ1BQ9UIG0 1483 aaKnown RBP18.1■□□□□ 0.49
C3orf35-201ENST00000328376 TTBK1Q5TCY1 1321 aaPredicted RBP18.06■□□□□ 0.48
C3orf35-201ENST00000328376 SYNJ1O43426 1573 aa18.06■□□□□ 0.48
C3orf35-201ENST00000328376 VPS8Q8N3P4 1428 aa18.05■□□□□ 0.48
C3orf35-201ENST00000328376 CLIP1P30622 1438 aa18.03■□□□□ 0.48
C3orf35-201ENST00000328376 BICRAQ9NZM4 1560 aa17.98■□□□□ 0.47
C3orf35-201ENST00000328376 CLSPNQ9HAW4 1339 aa17.94■□□□□ 0.46
C3orf35-201ENST00000328376 MIER1Q8N108 512 aa17.92■□□□□ 0.46
C3orf35-201ENST00000328376 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
C3orf35-201ENST00000328376 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
C3orf35-201ENST00000328376 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
C3orf35-201ENST00000328376 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
C3orf35-201ENST00000328376 APLP2Q06481 763 aa17.86■□□□□ 0.45
C3orf35-201ENST00000328376 BIVM-ERCC5R4GMW8 1640 aa17.86■□□□□ 0.45
C3orf35-201ENST00000328376 PABPN1Q86U42 306 aaKnown RBP eCLIP17.86■□□□□ 0.45
C3orf35-201ENST00000328376 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
C3orf35-201ENST00000328376 ATAD2BQ9ULI0 1458 aa17.84■□□□□ 0.45
C3orf35-201ENST00000328376 DHX57Q6P158 1386 aaKnown RBP17.76■□□□□ 0.43
C3orf35-201ENST00000328376 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
C3orf35-201ENST00000328376 CUX2O14529 1486 aa17.74■□□□□ 0.43
C3orf35-201ENST00000328376 ARAP1Q96P48 1450 aa17.73■□□□□ 0.43
C3orf35-201ENST00000328376 RRBP1Q9P2E9 1410 aaKnown RBP17.71■□□□□ 0.43
C3orf35-201ENST00000328376 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
C3orf35-201ENST00000328376 KIF27Q86VH2 1401 aa17.56■□□□□ 0.4
C3orf35-201ENST00000328376 SUPT16HQ9Y5B9 1047 aaKnown RBP17.56■□□□□ 0.4
C3orf35-201ENST00000328376 CUX1P39880 1505 aa17.55■□□□□ 0.4
C3orf35-201ENST00000328376 MAP3K1Q13233 1512 aa17.55■□□□□ 0.4
C3orf35-201ENST00000328376 CCNB3Q8WWL7 1395 aa17.54■□□□□ 0.4
C3orf35-201ENST00000328376 KANK4Q5T7N3 995 aaPredicted RBP17.53■□□□□ 0.4
C3orf35-201ENST00000328376 ARHGAP35Q9NRY4 1499 aa17.51■□□□□ 0.39
C3orf35-201ENST00000328376 RANGAP1P46060 587 aaPredicted RBP17.48■□□□□ 0.39
C3orf35-201ENST00000328376 PRDM2Q13029 1718 aa17.48■□□□□ 0.39
C3orf35-201ENST00000328376 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
C3orf35-201ENST00000328376 TIAM1Q13009 1591 aa17.46■□□□□ 0.38
C3orf35-201ENST00000328376 MAPKBP1O60336 1514 aa17.45■□□□□ 0.38
C3orf35-201ENST00000328376 CFTRP13569 1480 aa17.42■□□□□ 0.38
C3orf35-201ENST00000328376 RAB3GAP2Q9H2M9 1393 aa17.4■□□□□ 0.38
C3orf35-201ENST00000328376 CFAP43Q8NDM7 1665 aa17.38■□□□□ 0.37
C3orf35-201ENST00000328376 SETD5Q9C0A6 1442 aa17.36■□□□□ 0.37
C3orf35-201ENST00000328376 TSHZ2Q9NRE2 1034 aa17.36■□□□□ 0.37
C3orf35-201ENST00000328376 LRRC9Q6ZRR7 1453 aa17.34■□□□□ 0.37
C3orf35-201ENST00000328376 TIMELESSQ9UNS1 1208 aa17.33■□□□□ 0.37
C3orf35-201ENST00000328376 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms