RNA–Protein interactions for RNA: ENST00000548324.5

ACSS3-204, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

TSL 2

Gene ACSS3, Length 2,214 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-204ENST00000548324 SLC24A1O60721 1099 aa18.11■□□□□ 0.49
ACSS3-204ENST00000548324 CHIC1Q5VXU3 224 aa17.31■□□□□ 0.36
ACSS3-204ENST00000548324 NISCHQ9Y2I1 1504 aa17.19■□□□□ 0.34
ACSS3-204ENST00000548324 EHMT2Q96KQ7 1210 aa16.92■□□□□ 0.3
ACSS3-204ENST00000548324 PLPPR3Q6T4P5 718 aa16.45■□□□□ 0.22
ACSS3-204ENST00000548324 DAXXQ9UER7 740 aaPredicted RBP16.34■□□□□ 0.21
ACSS3-204ENST00000548324 RTN4Q9NQC3 1192 aaKnown RBP16.33■□□□□ 0.2
ACSS3-204ENST00000548324 AEBP2Q6ZN18 517 aaPredicted RBP16.11■□□□□ 0.17
ACSS3-204ENST00000548324 NCBP3Q53F19 620 aaKnown RBP16.1■□□□□ 0.17
ACSS3-204ENST00000548324 AMER1Q5JTC6 1135 aaPredicted RBP15.92■□□□□ 0.14
ACSS3-204ENST00000548324 KCNA4P22459 653 aa15.78■□□□□ 0.12
ACSS3-204ENST00000548324 CSRNP3Q8WYN3 585 aa15.7■□□□□ 0.1
ACSS3-204ENST00000548324 PRKCSHP14314 528 aaPredicted RBP15.66■□□□□ 0.1
ACSS3-204ENST00000548324 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
ACSS3-204ENST00000548324 TTBK1Q5TCY1 1321 aaPredicted RBP15.49■□□□□ 0.07
ACSS3-204ENST00000548324 APLP2Q06481 763 aa15.46■□□□□ 0.07
ACSS3-204ENST00000548324 ARXQ96QS3 562 aa15.43■□□□□ 0.06
ACSS3-204ENST00000548324 MYT1Q01538 1121 aa15.39■□□□□ 0.05
ACSS3-204ENST00000548324 PELP1Q8IZL8 1130 aaKnown RBP15.37■□□□□ 0.05
ACSS3-204ENST00000548324 TIMELESSQ9UNS1 1208 aa15.36■□□□□ 0.05
ACSS3-204ENST00000548324 ERICH6Q7L0X2 663 aa15.26■□□□□ 0.03
ACSS3-204ENST00000548324 TAOK2Q9UL54 1235 aa15.13■□□□□ 0.01
ACSS3-204ENST00000548324 TULP1O00294 542 aaPredicted RBP15.11■□□□□ 0.01
ACSS3-204ENST00000548324 CCDC180Q9P1Z9 1646 aa15.1■□□□□ 0.01
ACSS3-204ENST00000548324 RANGAP1P46060 587 aaPredicted RBP15.01□□□□□ -0.01
ACSS3-204ENST00000548324 HOMEZQ8IX15 550 aa14.96□□□□□ -0.02
ACSS3-204ENST00000548324 BCANQ96GW7 911 aa14.92□□□□□ -0.02
ACSS3-204ENST00000548324 TPRNQ4KMQ1 711 aa14.89□□□□□ -0.03
ACSS3-204ENST00000548324 SLC4A1APQ9BWU0 796 aaKnown RBP14.88□□□□□ -0.03
ACSS3-204ENST00000548324 ABCC9O60706 1549 aa14.76□□□□□ -0.05
ACSS3-204ENST00000548324 KLHL34Q8N239 644 aa14.75□□□□□ -0.05
ACSS3-204ENST00000548324 PODXL2Q9NZ53 605 aa14.69□□□□□ -0.06
ACSS3-204ENST00000548324 PLCB2Q00722 1185 aa14.68□□□□□ -0.06
ACSS3-204ENST00000548324 GTF3C3Q9Y5Q9 886 aa14.61□□□□□ -0.07
ACSS3-204ENST00000548324 EIF5BO60841 1220 aaKnown RBP14.56□□□□□ -0.08
ACSS3-204ENST00000548324 HAP1P54257 671 aaPredicted RBP14.56□□□□□ -0.08
ACSS3-204ENST00000548324 DNAJC5BQ9UF47 199 aa14.44□□□□□ -0.1
ACSS3-204ENST00000548324 ZCCHC6Q5VYS8 1495 aaKnown RBP14.42□□□□□ -0.1
ACSS3-204ENST00000548324 ZBTB22O15209 634 aa14.36□□□□□ -0.11
ACSS3-204ENST00000548324 NPM2Q86SE8 214 aaKnown RBP14.34□□□□□ -0.11
ACSS3-204ENST00000548324 TMEM132AQ24JP5 1023 aa14.3□□□□□ -0.12
ACSS3-204ENST00000548324 C14orf37Q86TY3 774 aa14.21□□□□□ -0.14
ACSS3-204ENST00000548324 ADRA2BP18089 450 aa14.19□□□□□ -0.14
ACSS3-204ENST00000548324 DCAF1Q9Y4B6 1507 aa14.18□□□□□ -0.14
ACSS3-204ENST00000548324 DCAF8L2P0C7V8 631 aa14.17□□□□□ -0.14
ACSS3-204ENST00000548324 VSIG10Q8N0Z9 540 aa14.15□□□□□ -0.14
ACSS3-204ENST00000548324 MYO15BQ96JP2 1530 aa14.09□□□□□ -0.15
ACSS3-204ENST00000548324 PLEKHG5O94827 1062 aa14.08□□□□□ -0.16
ACSS3-204ENST00000548324 NACADO15069 1562 aa14.08□□□□□ -0.16
ACSS3-204ENST00000548324 FBXO3Q9UK99 471 aa14.06□□□□□ -0.16
ACSS3-204ENST00000548324 TRIM26Q12899 539 aaPredicted RBP14.06□□□□□ -0.16
ACSS3-204ENST00000548324 FKBP8Q14318 412 aa14.06□□□□□ -0.16
ACSS3-204ENST00000548324 KDM2AQ9Y2K7 1162 aa14.04□□□□□ -0.16
ACSS3-204ENST00000548324 RB1CC1Q8TDY2 1594 aa14.01□□□□□ -0.17
ACSS3-204ENST00000548324 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
ACSS3-204ENST00000548324 FBLN2P98095 1184 aa13.93□□□□□ -0.18
ACSS3-204ENST00000548324 SCRIBQ14160 1630 aa13.9□□□□□ -0.18
ACSS3-204ENST00000548324 UNC13AQ9UPW8 1703 aa13.9□□□□□ -0.18
ACSS3-204ENST00000548324 UBTFP17480 764 aaKnown RBP13.88□□□□□ -0.19
ACSS3-204ENST00000548324 SHROOM4Q9ULL8 1493 aa13.86□□□□□ -0.19
ACSS3-204ENST00000548324 HRCP23327 699 aa13.85□□□□□ -0.19
ACSS3-204ENST00000548324 LOC105371045A0A1W2PR82 267 aa13.84□□□□□ -0.19
ACSS3-204ENST00000548324 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
ACSS3-204ENST00000548324 BICRAQ9NZM4 1560 aa13.73□□□□□ -0.21
ACSS3-204ENST00000548324 DNAJC5Q9H3Z4 198 aa13.72□□□□□ -0.21
ACSS3-204ENST00000548324 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
ACSS3-204ENST00000548324 PPP6R1Q9UPN7 881 aa13.51□□□□□ -0.25
ACSS3-204ENST00000548324 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
ACSS3-204ENST00000548324 PDIA4P13667 645 aaKnown RBP13.49□□□□□ -0.25
ACSS3-204ENST00000548324 NBR1Q14596 966 aa13.44□□□□□ -0.26
ACSS3-204ENST00000548324 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
ACSS3-204ENST00000548324 FOXD4L1Q9NU39 408 aa13.44□□□□□ -0.26
ACSS3-204ENST00000548324 CDK11BP21127 795 aaKnown RBP13.42□□□□□ -0.26
ACSS3-204ENST00000548324 CDK11AQ9UQ88 783 aaPredicted RBP13.42□□□□□ -0.26
ACSS3-204ENST00000548324 PPP4R3CPQ6ZMV5 832 aa13.4□□□□□ -0.26
ACSS3-204ENST00000548324 IGSF3O75054 1194 aa13.4□□□□□ -0.26
ACSS3-204ENST00000548324 BCL11AQ9H165 835 aa13.39□□□□□ -0.27
ACSS3-204ENST00000548324 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
ACSS3-204ENST00000548324 PAXIP1Q6ZW49 1069 aaPredicted RBP13.37□□□□□ -0.27
ACSS3-204ENST00000548324 PCGF6Q9BYE7 350 aa13.36□□□□□ -0.27
ACSS3-204ENST00000548324 CFAP44Q96MT7 982 aa13.35□□□□□ -0.27
ACSS3-204ENST00000548324 CNKSR2Q8WXI2 1034 aa13.35□□□□□ -0.27
ACSS3-204ENST00000548324 MROH2BQ7Z745 1585 aa13.32□□□□□ -0.28
ACSS3-204ENST00000548324 UBE2Q2Q8WVN8 375 aa13.32□□□□□ -0.28
ACSS3-204ENST00000548324 TSHZ2Q9NRE2 1034 aa13.31□□□□□ -0.28
ACSS3-204ENST00000548324 CCDC9Q9Y3X0 531 aaKnown RBP13.31□□□□□ -0.28
ACSS3-204ENST00000548324 SMARCA4P51532 1647 aa13.29□□□□□ -0.28
ACSS3-204ENST00000548324 PPARGC1BQ86YN6 1023 aaKnown RBP13.28□□□□□ -0.28
ACSS3-204ENST00000548324 EIF4G1Q04637 1599 aaKnown RBP13.28□□□□□ -0.28
ACSS3-204ENST00000548324 BAZ1AQ9NRL2 1556 aaPredicted RBP13.26□□□□□ -0.29
ACSS3-204ENST00000548324 DHX37Q8IY37 1157 aaKnown RBP13.25□□□□□ -0.29
ACSS3-204ENST00000548324 RSF1Q96T23 1441 aaPredicted RBP13.25□□□□□ -0.29
ACSS3-204ENST00000548324 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.24□□□□□ -0.29
ACSS3-204ENST00000548324 CC2D2AQ9P2K1 1620 aa13.24□□□□□ -0.29
ACSS3-204ENST00000548324 WIZO95785 1651 aa13.21□□□□□ -0.29
ACSS3-204ENST00000548324 HSP90B1P14625 803 aaKnown RBP13.2□□□□□ -0.3
ACSS3-204ENST00000548324 BBXQ8WY36 941 aaPredicted RBP13.17□□□□□ -0.3
ACSS3-204ENST00000548324 ARID3AQ99856 593 aa13.16□□□□□ -0.3
ACSS3-204ENST00000548324 BRD2P25440 801 aaKnown RBP13.16□□□□□ -0.3
ACSS3-204ENST00000548324 ZEB1P37275 1124 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms