RNA–Protein interactions for RNA: ENST00000332506.7

C3orf35-202, Transcript of chromosome 3 open reading frame 35, humanhuman

TSL 1 (best)

Gene C3orf35, Length 1,845 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf35-202ENST00000332506 NISCHQ9Y2I1 1504 aa27.24■■□□□ 1.95
C3orf35-202ENST00000332506 CCDC180Q9P1Z9 1646 aa23.85■■□□□ 1.41
C3orf35-202ENST00000332506 ZCCHC6Q5VYS8 1495 aaKnown RBP22.84■■□□□ 1.25
C3orf35-202ENST00000332506 ABCC9O60706 1549 aa22.76■■□□□ 1.23
C3orf35-202ENST00000332506 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
C3orf35-202ENST00000332506 DCAF1Q9Y4B6 1507 aa22.5■■□□□ 1.19
C3orf35-202ENST00000332506 MYO15BQ96JP2 1530 aa22.3■■□□□ 1.16
C3orf35-202ENST00000332506 NACADO15069 1562 aa22.25■■□□□ 1.15
C3orf35-202ENST00000332506 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
C3orf35-202ENST00000332506 RB1CC1Q8TDY2 1594 aa22.12■■□□□ 1.13
C3orf35-202ENST00000332506 SCRIBQ14160 1630 aa21.94■■□□□ 1.1
C3orf35-202ENST00000332506 UNC13AQ9UPW8 1703 aa21.71■■□□□ 1.07
C3orf35-202ENST00000332506 BICRAQ9NZM4 1560 aa21.46■■□□□ 1.03
C3orf35-202ENST00000332506 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
C3orf35-202ENST00000332506 CECR2Q9BXF3 1484 aa21.2■□□□□ 0.98
C3orf35-202ENST00000332506 SUPT5HO00267 1087 aaKnown RBP21.19■□□□□ 0.98
C3orf35-202ENST00000332506 RSF1Q96T23 1441 aaPredicted RBP21.06■□□□□ 0.96
C3orf35-202ENST00000332506 MROH2BQ7Z745 1585 aa21.05■□□□□ 0.96
C3orf35-202ENST00000332506 BAZ1AQ9NRL2 1556 aaPredicted RBP21.05■□□□□ 0.96
C3orf35-202ENST00000332506 SMARCA4P51532 1647 aa20.99■□□□□ 0.95
C3orf35-202ENST00000332506 WIZO95785 1651 aa20.89■□□□□ 0.93
C3orf35-202ENST00000332506 EIF4G1Q04637 1599 aaKnown RBP20.83■□□□□ 0.93
C3orf35-202ENST00000332506 PEG3Q9GZU2 1588 aa20.72■□□□□ 0.91
C3orf35-202ENST00000332506 ATAD2BQ9ULI0 1458 aa20.68■□□□□ 0.9
C3orf35-202ENST00000332506 SMARCA2P51531 1590 aa20.67■□□□□ 0.9
C3orf35-202ENST00000332506 TOP2AP11388 1531 aaKnown RBP20.64■□□□□ 0.89
C3orf35-202ENST00000332506 CC2D2AQ9P2K1 1620 aa20.58■□□□□ 0.89
C3orf35-202ENST00000332506 BAZ1BQ9UIG0 1483 aaKnown RBP20.57■□□□□ 0.88
C3orf35-202ENST00000332506 NCAPD3P42695 1498 aa20.53■□□□□ 0.88
C3orf35-202ENST00000332506 HMGXB3Q12766 1538 aa20.49■□□□□ 0.87
C3orf35-202ENST00000332506 CCDC88BA6NC98 1476 aa20.43■□□□□ 0.86
C3orf35-202ENST00000332506 DNAJC5BQ9UF47 199 aa20.25■□□□□ 0.83
C3orf35-202ENST00000332506 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
C3orf35-202ENST00000332506 CFTRP13569 1480 aa20.03■□□□□ 0.8
C3orf35-202ENST00000332506 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
C3orf35-202ENST00000332506 ABCC8Q09428 1581 aa19.96■□□□□ 0.79
C3orf35-202ENST00000332506 PRDM2Q13029 1718 aa19.94■□□□□ 0.78
C3orf35-202ENST00000332506 NESP48681 1621 aa19.92■□□□□ 0.78
C3orf35-202ENST00000332506 TRIM41Q8WV44 630 aa19.92■□□□□ 0.78
C3orf35-202ENST00000332506 LAMC3Q9Y6N6 1575 aa19.88■□□□□ 0.77
C3orf35-202ENST00000332506 WRNQ14191 1432 aaPredicted RBP eCLIP19.83■□□□□ 0.77
C3orf35-202ENST00000332506 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
C3orf35-202ENST00000332506 SYNJ1O43426 1573 aa19.77■□□□□ 0.76
C3orf35-202ENST00000332506 PDS5BQ9NTI5 1447 aa19.72■□□□□ 0.75
C3orf35-202ENST00000332506 CUX1P39880 1505 aa19.7■□□□□ 0.74
C3orf35-202ENST00000332506 TOP2BQ02880 1626 aa19.7■□□□□ 0.74
C3orf35-202ENST00000332506 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
C3orf35-202ENST00000332506 CEP164Q9UPV0 1460 aa19.68■□□□□ 0.74
C3orf35-202ENST00000332506 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
C3orf35-202ENST00000332506 FAM9AQ8IZU1 332 aaPredicted RBP19.58■□□□□ 0.72
C3orf35-202ENST00000332506 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
C3orf35-202ENST00000332506 URB2Q14146 1524 aaKnown RBP19.56■□□□□ 0.72
C3orf35-202ENST00000332506 TOPBP1Q92547 1522 aa19.56■□□□□ 0.72
C3orf35-202ENST00000332506 SOGA1O94964 1423 aa19.53■□□□□ 0.72
C3orf35-202ENST00000332506 ERCC6Q03468 1493 aa19.52■□□□□ 0.72
C3orf35-202ENST00000332506 FGD5Q6ZNL6 1462 aa19.51■□□□□ 0.71
C3orf35-202ENST00000332506 MRC2Q9UBG0 1479 aa19.49■□□□□ 0.71
C3orf35-202ENST00000332506 RUSC2Q8N2Y8 1516 aa19.48■□□□□ 0.71
C3orf35-202ENST00000332506 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
C3orf35-202ENST00000332506 EEA1Q15075 1411 aa19.42■□□□□ 0.7
C3orf35-202ENST00000332506 LOC105371045A0A1W2PR82 267 aa19.4■□□□□ 0.7
C3orf35-202ENST00000332506 WDR62O43379 1518 aa19.4■□□□□ 0.7
C3orf35-202ENST00000332506 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.7
C3orf35-202ENST00000332506 RAD54L2Q9Y4B4 1467 aa19.39■□□□□ 0.69
C3orf35-202ENST00000332506 CSRNP3Q8WYN3 585 aa19.36■□□□□ 0.69
C3orf35-202ENST00000332506 CUX2O14529 1486 aa19.35■□□□□ 0.69
C3orf35-202ENST00000332506 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
C3orf35-202ENST00000332506 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.69
C3orf35-202ENST00000332506 ABCA10Q8WWZ4 1543 aa19.32■□□□□ 0.68
C3orf35-202ENST00000332506 WDR97A6NE52 1622 aa19.3■□□□□ 0.68
C3orf35-202ENST00000332506 TARBP1Q13395 1621 aaKnown RBP19.28■□□□□ 0.68
C3orf35-202ENST00000332506 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
C3orf35-202ENST00000332506 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
C3orf35-202ENST00000332506 KIF21BO75037 1637 aa19.2■□□□□ 0.66
C3orf35-202ENST00000332506 ABCA5Q8WWZ7 1642 aa19.19■□□□□ 0.66
C3orf35-202ENST00000332506 IGF1RP08069 1367 aa19.19■□□□□ 0.66
C3orf35-202ENST00000332506 GOLGA3Q08378 1498 aa19.17■□□□□ 0.66
C3orf35-202ENST00000332506 GAPVD1Q14C86 1478 aa19.16■□□□□ 0.66
C3orf35-202ENST00000332506 PRXQ9BXM0 1461 aa19.16■□□□□ 0.66
C3orf35-202ENST00000332506 RAPGEF2Q9Y4G8 1499 aa19.14■□□□□ 0.66
C3orf35-202ENST00000332506 ZNF608Q9ULD9 1512 aaPredicted RBP19.14■□□□□ 0.65
C3orf35-202ENST00000332506 AQRO60306 1485 aaKnown RBP eCLIP19.13■□□□□ 0.65
C3orf35-202ENST00000332506 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
C3orf35-202ENST00000332506 ERICH3Q5RHP9 1530 aa19.1■□□□□ 0.65
C3orf35-202ENST00000332506 CARMIL1Q5VZK9 1371 aa19.1■□□□□ 0.65
C3orf35-202ENST00000332506 PBRM1Q86U86 1689 aa19.09■□□□□ 0.65
C3orf35-202ENST00000332506 EIF4G3O43432 1585 aaKnown RBP19.07■□□□□ 0.64
C3orf35-202ENST00000332506 CUL7Q14999 1698 aa19.07■□□□□ 0.64
C3orf35-202ENST00000332506 TNIKQ9UKE5 1360 aa19.06■□□□□ 0.64
C3orf35-202ENST00000332506 GRIN2BQ13224 1484 aa19.03■□□□□ 0.64
C3orf35-202ENST00000332506 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
C3orf35-202ENST00000332506 ADAMTS12P58397 1594 aa18.96■□□□□ 0.63
C3orf35-202ENST00000332506 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
C3orf35-202ENST00000332506 FHAD1B1AJZ9 1412 aa18.94■□□□□ 0.62
C3orf35-202ENST00000332506 RANGAP1P46060 587 aaPredicted RBP18.9■□□□□ 0.62
C3orf35-202ENST00000332506 MAGI1Q96QZ7 1491 aaPredicted RBP18.89■□□□□ 0.61
C3orf35-202ENST00000332506 CLIP1P30622 1438 aa18.86■□□□□ 0.61
C3orf35-202ENST00000332506 CTTNBP2Q8WZ74 1663 aa18.85■□□□□ 0.61
C3orf35-202ENST00000332506 SYNJ2O15056 1496 aa18.83■□□□□ 0.6
C3orf35-202ENST00000332506 CHMP7Q8WUX9 453 aaPredicted RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms