RNA–Protein interactions for RNA: ENST00000615329.4

RPS6KC1-209, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-209ENST00000615329 NISCHQ9Y2I1 1504 aa24.54■■□□□ 1.52
RPS6KC1-209ENST00000615329 SHROOM4Q9ULL8 1493 aa21.65■■□□□ 1.06
RPS6KC1-209ENST00000615329 SUPT5HO00267 1087 aaKnown RBP21.57■■□□□ 1.04
RPS6KC1-209ENST00000615329 DCAF8L2P0C7V8 631 aa21.53■■□□□ 1.04
RPS6KC1-209ENST00000615329 PCGF6Q9BYE7 350 aa20.93■□□□□ 0.94
RPS6KC1-209ENST00000615329 EHMT2Q96KQ7 1210 aa20.84■□□□□ 0.93
RPS6KC1-209ENST00000615329 HRCP23327 699 aa20.78■□□□□ 0.92
RPS6KC1-209ENST00000615329 PPARGC1BQ86YN6 1023 aaKnown RBP20.7■□□□□ 0.9
RPS6KC1-209ENST00000615329 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
RPS6KC1-209ENST00000615329 ZCCHC6Q5VYS8 1495 aaKnown RBP20.65■□□□□ 0.9
RPS6KC1-209ENST00000615329 CHIC1Q5VXU3 224 aa20.57■□□□□ 0.88
RPS6KC1-209ENST00000615329 LOC105371045A0A1W2PR82 267 aa20.37■□□□□ 0.85
RPS6KC1-209ENST00000615329 MYO15BQ96JP2 1530 aa20.36■□□□□ 0.85
RPS6KC1-209ENST00000615329 FAM9AQ8IZU1 332 aaPredicted RBP20.19■□□□□ 0.82
RPS6KC1-209ENST00000615329 TTBK1Q5TCY1 1321 aaPredicted RBP20.18■□□□□ 0.82
RPS6KC1-209ENST00000615329 TRIM26Q12899 539 aaPredicted RBP20.01■□□□□ 0.79
RPS6KC1-209ENST00000615329 DCAF1Q9Y4B6 1507 aa19.9■□□□□ 0.78
RPS6KC1-209ENST00000615329 ABCC9O60706 1549 aa19.86■□□□□ 0.77
RPS6KC1-209ENST00000615329 PELP1Q8IZL8 1130 aaKnown RBP19.82■□□□□ 0.76
RPS6KC1-209ENST00000615329 TRIM41Q8WV44 630 aa19.79■□□□□ 0.76
RPS6KC1-209ENST00000615329 YTHDC1Q96MU7 727 aaKnown RBP19.77■□□□□ 0.75
RPS6KC1-209ENST00000615329 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
RPS6KC1-209ENST00000615329 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
RPS6KC1-209ENST00000615329 CCER1Q8TC90 406 aaPredicted RBP19.71■□□□□ 0.75
RPS6KC1-209ENST00000615329 CENPBP07199 599 aaPredicted RBP19.7■□□□□ 0.74
RPS6KC1-209ENST00000615329 SCAF1Q9H7N4 1312 aaKnown RBP19.56■□□□□ 0.72
RPS6KC1-209ENST00000615329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.49■□□□□ 0.71
RPS6KC1-209ENST00000615329 RANGAP1P46060 587 aaPredicted RBP19.48■□□□□ 0.71
RPS6KC1-209ENST00000615329 RSF1Q96T23 1441 aaPredicted RBP19.47■□□□□ 0.71
RPS6KC1-209ENST00000615329 APLP2Q06481 763 aa19.37■□□□□ 0.69
RPS6KC1-209ENST00000615329 CECR2Q9BXF3 1484 aa19.33■□□□□ 0.69
RPS6KC1-209ENST00000615329 NACADO15069 1562 aa19.31■□□□□ 0.68
RPS6KC1-209ENST00000615329 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
RPS6KC1-209ENST00000615329 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
RPS6KC1-209ENST00000615329 DIEXFQ68CQ4 756 aaKnown RBP19.22■□□□□ 0.67
RPS6KC1-209ENST00000615329 MYT1Q01538 1121 aa19.22■□□□□ 0.67
RPS6KC1-209ENST00000615329 ACIN1Q9UKV3 1341 aaKnown RBP19.21■□□□□ 0.67
RPS6KC1-209ENST00000615329 ERICH6Q7L0X2 663 aa19.21■□□□□ 0.67
RPS6KC1-209ENST00000615329 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
RPS6KC1-209ENST00000615329 MROH2BQ7Z745 1585 aa19.16■□□□□ 0.66
RPS6KC1-209ENST00000615329 PABPN1Q86U42 306 aaKnown RBP eCLIP19.16■□□□□ 0.66
RPS6KC1-209ENST00000615329 UBTFP17480 764 aaKnown RBP19.07■□□□□ 0.64
RPS6KC1-209ENST00000615329 WIZO95785 1651 aa19.01■□□□□ 0.63
RPS6KC1-209ENST00000615329 HNRNPUL2Q1KMD3 747 aaKnown RBP18.93■□□□□ 0.62
RPS6KC1-209ENST00000615329 NEFLP07196 543 aa18.92■□□□□ 0.62
RPS6KC1-209ENST00000615329 ATP1B4Q9UN42 357 aaPredicted RBP18.85■□□□□ 0.61
RPS6KC1-209ENST00000615329 BAZ1AQ9NRL2 1556 aaPredicted RBP18.84■□□□□ 0.61
RPS6KC1-209ENST00000615329 ZNF316A6NFI3 1004 aaPredicted RBP18.8■□□□□ 0.6
RPS6KC1-209ENST00000615329 ITGAEP38570 1179 aa18.78■□□□□ 0.6
RPS6KC1-209ENST00000615329 BCANQ96GW7 911 aa18.74■□□□□ 0.59
RPS6KC1-209ENST00000615329 CCDC88BA6NC98 1476 aa18.69■□□□□ 0.58
RPS6KC1-209ENST00000615329 MIER1Q8N108 512 aa18.69■□□□□ 0.58
RPS6KC1-209ENST00000615329 CNGB1Q14028 1251 aaPredicted RBP18.68■□□□□ 0.58
RPS6KC1-209ENST00000615329 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
RPS6KC1-209ENST00000615329 UNC13AQ9UPW8 1703 aa18.66■□□□□ 0.58
RPS6KC1-209ENST00000615329 ABCC8Q09428 1581 aa18.64■□□□□ 0.57
RPS6KC1-209ENST00000615329 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
RPS6KC1-209ENST00000615329 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
RPS6KC1-209ENST00000615329 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
RPS6KC1-209ENST00000615329 CEP162Q5TB80 1403 aa18.54■□□□□ 0.56
RPS6KC1-209ENST00000615329 SMARCA2P51531 1590 aa18.52■□□□□ 0.56
RPS6KC1-209ENST00000615329 SOGA1O94964 1423 aa18.5■□□□□ 0.55
RPS6KC1-209ENST00000615329 POLR3GLQ9BT43 218 aa18.43■□□□□ 0.54
RPS6KC1-209ENST00000615329 RUSC2Q8N2Y8 1516 aa18.41■□□□□ 0.54
RPS6KC1-209ENST00000615329 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
RPS6KC1-209ENST00000615329 ATAD2BQ9ULI0 1458 aa18.36■□□□□ 0.53
RPS6KC1-209ENST00000615329 BAZ1BQ9UIG0 1483 aaKnown RBP18.34■□□□□ 0.53
RPS6KC1-209ENST00000615329 WRNQ14191 1432 aaPredicted RBP eCLIP18.33■□□□□ 0.539e-6■■■■■ 50.1
RPS6KC1-209ENST00000615329 TNIKQ9UKE5 1360 aa18.31■□□□□ 0.52
RPS6KC1-209ENST00000615329 SUPT16HQ9Y5B9 1047 aaKnown RBP18.19■□□□□ 0.5
RPS6KC1-209ENST00000615329 CLIP1P30622 1438 aa18.18■□□□□ 0.5
RPS6KC1-209ENST00000615329 GOLGA3Q08378 1498 aa18.17■□□□□ 0.5
RPS6KC1-209ENST00000615329 PEG3Q9GZU2 1588 aa18.17■□□□□ 0.5
RPS6KC1-209ENST00000615329 RTL5Q5HYW3 569 aaPredicted RBP18.15■□□□□ 0.5
RPS6KC1-209ENST00000615329 SYNJ1O43426 1573 aa18.13■□□□□ 0.49
RPS6KC1-209ENST00000615329 EEA1Q15075 1411 aa18.13■□□□□ 0.49
RPS6KC1-209ENST00000615329 DAXXQ9UER7 740 aaPredicted RBP18.13■□□□□ 0.49
RPS6KC1-209ENST00000615329 FKBP8Q14318 412 aa18.08■□□□□ 0.48
RPS6KC1-209ENST00000615329 KCNH8Q96L42 1107 aa18.03■□□□□ 0.48
RPS6KC1-209ENST00000615329 DDX10Q13206 875 aaKnown RBP18.03■□□□□ 0.48
RPS6KC1-209ENST00000615329 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
RPS6KC1-209ENST00000615329 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
RPS6KC1-209ENST00000615329 TSHZ2Q9NRE2 1034 aa18■□□□□ 0.47
RPS6KC1-209ENST00000615329 CDK11AQ9UQ88 783 aaPredicted RBP18■□□□□ 0.47
RPS6KC1-209ENST00000615329 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
RPS6KC1-209ENST00000615329 RAPGEF2Q9Y4G8 1499 aa18■□□□□ 0.47
RPS6KC1-209ENST00000615329 TRIM52Q96A61 297 aa17.97■□□□□ 0.47
RPS6KC1-209ENST00000615329 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
RPS6KC1-209ENST00000615329 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
RPS6KC1-209ENST00000615329 ANP32EQ9BTT0 268 aa17.95■□□□□ 0.46
RPS6KC1-209ENST00000615329 VPS8Q8N3P4 1428 aa17.94■□□□□ 0.46
RPS6KC1-209ENST00000615329 ANP32CO43423 234 aa17.93■□□□□ 0.46
RPS6KC1-209ENST00000615329 CLSPNQ9HAW4 1339 aa17.92■□□□□ 0.46
RPS6KC1-209ENST00000615329 DHX57Q6P158 1386 aaKnown RBP17.87■□□□□ 0.45
RPS6KC1-209ENST00000615329 IRX6P78412 446 aaPredicted RBP17.87■□□□□ 0.45
RPS6KC1-209ENST00000615329 NBR1Q14596 966 aa17.85■□□□□ 0.45
RPS6KC1-209ENST00000615329 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
RPS6KC1-209ENST00000615329 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
RPS6KC1-209ENST00000615329 EIF5BO60841 1220 aaKnown RBP17.84■□□□□ 0.45
RPS6KC1-209ENST00000615329 SIN3AQ96ST3 1273 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms