RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 DCAF8L2P0C7V8 631 aa23.68■■□□□ 1.38
RPS6KC1-206ENST00000543354 SUPT5HO00267 1087 aaKnown RBP23.34■■□□□ 1.33
RPS6KC1-206ENST00000543354 NISCHQ9Y2I1 1504 aa23.24■■□□□ 1.31
RPS6KC1-206ENST00000543354 SHROOM4Q9ULL8 1493 aa22.94■■□□□ 1.26
RPS6KC1-206ENST00000543354 EHMT2Q96KQ7 1210 aa22.6■■□□□ 1.21
RPS6KC1-206ENST00000543354 PCGF6Q9BYE7 350 aa22.42■■□□□ 1.18
RPS6KC1-206ENST00000543354 FAM9AQ8IZU1 332 aaPredicted RBP22.01■■□□□ 1.11
RPS6KC1-206ENST00000543354 TTBK1Q5TCY1 1321 aaPredicted RBP21.87■■□□□ 1.09
RPS6KC1-206ENST00000543354 HRCP23327 699 aa21.54■■□□□ 1.04
RPS6KC1-206ENST00000543354 PPARGC1BQ86YN6 1023 aaKnown RBP21.52■■□□□ 1.04
RPS6KC1-206ENST00000543354 CCER1Q8TC90 406 aaPredicted RBP21.41■■□□□ 1.02
RPS6KC1-206ENST00000543354 PELP1Q8IZL8 1130 aaKnown RBP21.35■■□□□ 1.01
RPS6KC1-206ENST00000543354 LOC105371045A0A1W2PR82 267 aa21.34■■□□□ 1.01
RPS6KC1-206ENST00000543354 TRIM41Q8WV44 630 aa21.34■■□□□ 1.01
RPS6KC1-206ENST00000543354 CENPBP07199 599 aaPredicted RBP21.33■■□□□ 1.01
RPS6KC1-206ENST00000543354 ZEB1P37275 1124 aaPredicted RBP21.3■■□□□ 1
RPS6KC1-206ENST00000543354 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
RPS6KC1-206ENST00000543354 RANGAP1P46060 587 aaPredicted RBP21.25■□□□□ 0.99
RPS6KC1-206ENST00000543354 APLP2Q06481 763 aa21.24■□□□□ 0.99
RPS6KC1-206ENST00000543354 CHIC1Q5VXU3 224 aa21.18■□□□□ 0.98
RPS6KC1-206ENST00000543354 TRIM26Q12899 539 aaPredicted RBP21.14■□□□□ 0.97
RPS6KC1-206ENST00000543354 UBTFP17480 764 aaKnown RBP20.91■□□□□ 0.94
RPS6KC1-206ENST00000543354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.77■□□□□ 0.92
RPS6KC1-206ENST00000543354 ERICH6Q7L0X2 663 aa20.7■□□□□ 0.9
RPS6KC1-206ENST00000543354 ATP1B4Q9UN42 357 aaPredicted RBP20.64■□□□□ 0.89
RPS6KC1-206ENST00000543354 MYT1Q01538 1121 aa20.63■□□□□ 0.89
RPS6KC1-206ENST00000543354 HNRNPUL2Q1KMD3 747 aaKnown RBP20.59■□□□□ 0.89
RPS6KC1-206ENST00000543354 DIEXFQ68CQ4 756 aaKnown RBP20.56■□□□□ 0.88
RPS6KC1-206ENST00000543354 MYO15BQ96JP2 1530 aa20.54■□□□□ 0.88
RPS6KC1-206ENST00000543354 NEFLP07196 543 aa20.51■□□□□ 0.87
RPS6KC1-206ENST00000543354 GTF3C3Q9Y5Q9 886 aa20.51■□□□□ 0.87
RPS6KC1-206ENST00000543354 ITGAEP38570 1179 aa20.48■□□□□ 0.87
RPS6KC1-206ENST00000543354 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
RPS6KC1-206ENST00000543354 CNGB1Q14028 1251 aaPredicted RBP20.22■□□□□ 0.83
RPS6KC1-206ENST00000543354 ACIN1Q9UKV3 1341 aaKnown RBP20.19■□□□□ 0.82
RPS6KC1-206ENST00000543354 BCANQ96GW7 911 aa20.17■□□□□ 0.82
RPS6KC1-206ENST00000543354 POLR3GLQ9BT43 218 aa20.04■□□□□ 0.8
RPS6KC1-206ENST00000543354 NEUROD1Q13562 356 aa20.02■□□□□ 0.8
RPS6KC1-206ENST00000543354 ZNF316A6NFI3 1004 aaPredicted RBP19.96■□□□□ 0.79
RPS6KC1-206ENST00000543354 DCAF1Q9Y4B6 1507 aa19.94■□□□□ 0.78
RPS6KC1-206ENST00000543354 FAM50AQ14320 339 aaKnown RBP19.74■□□□□ 0.75
RPS6KC1-206ENST00000543354 CCDC180Q9P1Z9 1646 aa19.71■□□□□ 0.75
RPS6KC1-206ENST00000543354 DAXXQ9UER7 740 aaPredicted RBP19.64■□□□□ 0.74
RPS6KC1-206ENST00000543354 MIER1Q8N108 512 aa19.6■□□□□ 0.73
RPS6KC1-206ENST00000543354 RTL5Q5HYW3 569 aaPredicted RBP19.59■□□□□ 0.73
RPS6KC1-206ENST00000543354 PABPN1Q86U42 306 aaKnown RBP eCLIP19.55■□□□□ 0.72
RPS6KC1-206ENST00000543354 FKBP8Q14318 412 aa19.55■□□□□ 0.72
RPS6KC1-206ENST00000543354 ANP32CO43423 234 aa19.54■□□□□ 0.72
RPS6KC1-206ENST00000543354 CSRNP3Q8WYN3 585 aa19.54■□□□□ 0.72
RPS6KC1-206ENST00000543354 ZCCHC6Q5VYS8 1495 aaKnown RBP19.52■□□□□ 0.72
RPS6KC1-206ENST00000543354 CDK11AQ9UQ88 783 aaPredicted RBP19.5■□□□□ 0.71
RPS6KC1-206ENST00000543354 TRIM52Q96A61 297 aa19.47■□□□□ 0.71
RPS6KC1-206ENST00000543354 DDX10Q13206 875 aaKnown RBP19.44■□□□□ 0.7
RPS6KC1-206ENST00000543354 ZNF326Q5BKZ1 582 aaKnown RBP19.41■□□□□ 0.7
RPS6KC1-206ENST00000543354 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
RPS6KC1-206ENST00000543354 ABCC9O60706 1549 aa19.39■□□□□ 0.69
RPS6KC1-206ENST00000543354 CLSPNQ9HAW4 1339 aa19.37■□□□□ 0.69
RPS6KC1-206ENST00000543354 HIRIP3Q9BW71 556 aaPredicted RBP19.35■□□□□ 0.69
RPS6KC1-206ENST00000543354 IRX6P78412 446 aaPredicted RBP19.28■□□□□ 0.68
RPS6KC1-206ENST00000543354 HNRNPUQ00839 825 aaKnown RBP eCLIP19.27■□□□□ 0.68
RPS6KC1-206ENST00000543354 MYT1LQ9UL68 1186 aa19.25■□□□□ 0.67
RPS6KC1-206ENST00000543354 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
RPS6KC1-206ENST00000543354 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
RPS6KC1-206ENST00000543354 SLC4A1APQ9BWU0 796 aaKnown RBP19.22■□□□□ 0.67
RPS6KC1-206ENST00000543354 FAM9BQ8IZU0 186 aa19.17■□□□□ 0.66
RPS6KC1-206ENST00000543354 NBR1Q14596 966 aa19.17■□□□□ 0.66
RPS6KC1-206ENST00000543354 SALL2Q9Y467 1007 aaPredicted RBP19.1■□□□□ 0.65
RPS6KC1-206ENST00000543354 ANP32AP39687 249 aaKnown RBP19.1■□□□□ 0.65
RPS6KC1-206ENST00000543354 SENP3-EIF4A1A0A087X0R7 540 aa19.09■□□□□ 0.65
RPS6KC1-206ENST00000543354 EIF5BO60841 1220 aaKnown RBP19.06■□□□□ 0.64
RPS6KC1-206ENST00000543354 BCL11AQ9H165 835 aa19.05■□□□□ 0.64
RPS6KC1-206ENST00000543354 SCRIBQ14160 1630 aa19.02■□□□□ 0.64
RPS6KC1-206ENST00000543354 ANP32EQ9BTT0 268 aa19■□□□□ 0.63
RPS6KC1-206ENST00000543354 TONSLQ96HA7 1378 aa19■□□□□ 0.63
RPS6KC1-206ENST00000543354 SUPT16HQ9Y5B9 1047 aaKnown RBP18.98■□□□□ 0.63
RPS6KC1-206ENST00000543354 CHIC2Q9UKJ5 165 aa18.95■□□□□ 0.62
RPS6KC1-206ENST00000543354 CEP162Q5TB80 1403 aa18.93■□□□□ 0.62
RPS6KC1-206ENST00000543354 CCDC136Q96JN2 1154 aa18.93■□□□□ 0.62
RPS6KC1-206ENST00000543354 RSF1Q96T23 1441 aaPredicted RBP18.91■□□□□ 0.62
RPS6KC1-206ENST00000543354 MRS2Q9HD23 443 aa18.9■□□□□ 0.62
RPS6KC1-206ENST00000543354 ZNF777Q9ULD5 760 aaPredicted RBP18.88■□□□□ 0.61
RPS6KC1-206ENST00000543354 CLIP1P30622 1438 aa18.87■□□□□ 0.61
RPS6KC1-206ENST00000543354 ZBTB47Q9UFB7 747 aaPredicted RBP18.85■□□□□ 0.61
RPS6KC1-206ENST00000543354 SIN3AQ96ST3 1273 aa18.82■□□□□ 0.6
RPS6KC1-206ENST00000543354 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
RPS6KC1-206ENST00000543354 FBLN2P98095 1184 aa18.81■□□□□ 0.6
RPS6KC1-206ENST00000543354 ARXQ96QS3 562 aa18.81■□□□□ 0.6
RPS6KC1-206ENST00000543354 TMC1Q8TDI8 760 aa18.78■□□□□ 0.6
RPS6KC1-206ENST00000543354 RTN4Q9NQC3 1192 aaKnown RBP18.71■□□□□ 0.59
RPS6KC1-206ENST00000543354 RB1CC1Q8TDY2 1594 aa18.7■□□□□ 0.58
RPS6KC1-206ENST00000543354 RRP7BPQ9NSQ0 103 aa18.69■□□□□ 0.58
RPS6KC1-206ENST00000543354 TSHZ2Q9NRE2 1034 aa18.68■□□□□ 0.58
RPS6KC1-206ENST00000543354 KDM2AQ9Y2K7 1162 aa18.68■□□□□ 0.58
RPS6KC1-206ENST00000543354 RBM19Q9Y4C8 960 aaKnown RBP18.68■□□□□ 0.58
RPS6KC1-206ENST00000543354 B4GALNT3Q6L9W6 998 aa18.68■□□□□ 0.58
RPS6KC1-206ENST00000543354 TNIKQ9UKE5 1360 aa18.64■□□□□ 0.57
RPS6KC1-206ENST00000543354 EIF4G2P78344 907 aaKnown RBP eCLIP18.64■□□□□ 0.57
RPS6KC1-206ENST00000543354 KCNH8Q96L42 1107 aa18.6■□□□□ 0.57
RPS6KC1-206ENST00000543354 SOGA1O94964 1423 aa18.59■□□□□ 0.57
RPS6KC1-206ENST00000543354 GOLGA3Q08378 1498 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms