RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 NISCHQ9Y2I1 1504 aa21.75■■□□□ 1.07
PDLIM5-206ENST00000437932 DCAF8L2P0C7V8 631 aa20.52■□□□□ 0.87
PDLIM5-206ENST00000437932 SHROOM4Q9ULL8 1493 aa20.38■□□□□ 0.85
PDLIM5-206ENST00000437932 SUPT5HO00267 1087 aaKnown RBP20.21■□□□□ 0.83
PDLIM5-206ENST00000437932 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
PDLIM5-206ENST00000437932 PCGF6Q9BYE7 350 aa19.09■□□□□ 0.65
PDLIM5-206ENST00000437932 FAM9AQ8IZU1 332 aaPredicted RBP18.96■□□□□ 0.63
PDLIM5-206ENST00000437932 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
PDLIM5-206ENST00000437932 LOC105371045A0A1W2PR82 267 aa18.69■□□□□ 0.58
PDLIM5-206ENST00000437932 CHIC1Q5VXU3 224 aa18.66■□□□□ 0.58
PDLIM5-206ENST00000437932 PPARGC1BQ86YN6 1023 aaKnown RBP18.56■□□□□ 0.56
PDLIM5-206ENST00000437932 TRIM41Q8WV44 630 aa18.52■□□□□ 0.56
PDLIM5-206ENST00000437932 HRCP23327 699 aa18.44■□□□□ 0.54
PDLIM5-206ENST00000437932 RANGAP1P46060 587 aaPredicted RBP18.31■□□□□ 0.52
PDLIM5-206ENST00000437932 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
PDLIM5-206ENST00000437932 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
PDLIM5-206ENST00000437932 TRIM26Q12899 539 aaPredicted RBP18.18■□□□□ 0.5
PDLIM5-206ENST00000437932 CCER1Q8TC90 406 aaPredicted RBP18.11■□□□□ 0.49
PDLIM5-206ENST00000437932 ABCC9O60706 1549 aa18.01■□□□□ 0.47
PDLIM5-206ENST00000437932 UBTFP17480 764 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-206ENST00000437932 SCRIBQ14160 1630 aa17.93■□□□□ 0.46
PDLIM5-206ENST00000437932 ZEB1P37275 1124 aaPredicted RBP17.93■□□□□ 0.46
PDLIM5-206ENST00000437932 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
PDLIM5-206ENST00000437932 APLP2Q06481 763 aa17.89■□□□□ 0.45
PDLIM5-206ENST00000437932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
PDLIM5-206ENST00000437932 YTHDC1Q96MU7 727 aaKnown RBP17.87■□□□□ 0.45
PDLIM5-206ENST00000437932 PABPN1Q86U42 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
PDLIM5-206ENST00000437932 HNRNPUL2Q1KMD3 747 aaKnown RBP17.67■□□□□ 0.42
PDLIM5-206ENST00000437932 ATP1B4Q9UN42 357 aaPredicted RBP17.64■□□□□ 0.41
PDLIM5-206ENST00000437932 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
PDLIM5-206ENST00000437932 CENPBP07199 599 aaPredicted RBP17.56■□□□□ 0.4
PDLIM5-206ENST00000437932 ITGAEP38570 1179 aa17.53■□□□□ 0.4
PDLIM5-206ENST00000437932 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
PDLIM5-206ENST00000437932 DIEXFQ68CQ4 756 aaKnown RBP17.44■□□□□ 0.38
PDLIM5-206ENST00000437932 RB1CC1Q8TDY2 1594 aa17.31■□□□□ 0.36
PDLIM5-206ENST00000437932 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
PDLIM5-206ENST00000437932 GTF3C3Q9Y5Q9 886 aa17.26■□□□□ 0.35
PDLIM5-206ENST00000437932 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
PDLIM5-206ENST00000437932 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
PDLIM5-206ENST00000437932 PELP1Q8IZL8 1130 aaKnown RBP17.14■□□□□ 0.33
PDLIM5-206ENST00000437932 MROH2BQ7Z745 1585 aa17.09■□□□□ 0.33
PDLIM5-206ENST00000437932 ACIN1Q9UKV3 1341 aaKnown RBP17.09■□□□□ 0.33
PDLIM5-206ENST00000437932 NEUROD1Q13562 356 aa17.08■□□□□ 0.32
PDLIM5-206ENST00000437932 ZNF316A6NFI3 1004 aaPredicted RBP17.07■□□□□ 0.32
PDLIM5-206ENST00000437932 WIZO95785 1651 aa17.04■□□□□ 0.32
PDLIM5-206ENST00000437932 FAM50AQ14320 339 aaKnown RBP17.04■□□□□ 0.32
PDLIM5-206ENST00000437932 ABCC8Q09428 1581 aa17.03■□□□□ 0.32
PDLIM5-206ENST00000437932 P3H3Q8IVL6 736 aa17.03■□□□□ 0.32
PDLIM5-206ENST00000437932 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
PDLIM5-206ENST00000437932 CEP162Q5TB80 1403 aa16.98■□□□□ 0.31
PDLIM5-206ENST00000437932 SOGA1O94964 1423 aa16.96■□□□□ 0.31
PDLIM5-206ENST00000437932 NACADO15069 1562 aa16.95■□□□□ 0.3
PDLIM5-206ENST00000437932 BCANQ96GW7 911 aa16.94■□□□□ 0.3
PDLIM5-206ENST00000437932 CCDC88BA6NC98 1476 aa16.89■□□□□ 0.29
PDLIM5-206ENST00000437932 MIER1Q8N108 512 aa16.87■□□□□ 0.29
PDLIM5-206ENST00000437932 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
PDLIM5-206ENST00000437932 ARID3CA6NKF2 412 aa16.85■□□□□ 0.29
PDLIM5-206ENST00000437932 NEFLP07196 543 aa16.82■□□□□ 0.28
PDLIM5-206ENST00000437932 CLIP1P30622 1438 aa16.79■□□□□ 0.28
PDLIM5-206ENST00000437932 BAZ1AQ9NRL2 1556 aaPredicted RBP16.79■□□□□ 0.28
PDLIM5-206ENST00000437932 WRNQ14191 1432 aaPredicted RBP eCLIP16.76■□□□□ 0.27
PDLIM5-206ENST00000437932 GOLGA3Q08378 1498 aa16.76■□□□□ 0.27
PDLIM5-206ENST00000437932 RUSC2Q8N2Y8 1516 aa16.74■□□□□ 0.27
PDLIM5-206ENST00000437932 HIRIP3Q9BW71 556 aaPredicted RBP16.73■□□□□ 0.27
PDLIM5-206ENST00000437932 TNIKQ9UKE5 1360 aa16.72■□□□□ 0.27
PDLIM5-206ENST00000437932 ERICH6Q7L0X2 663 aa16.7■□□□□ 0.26
PDLIM5-206ENST00000437932 TRIM52Q96A61 297 aa16.69■□□□□ 0.26
PDLIM5-206ENST00000437932 BAZ1BQ9UIG0 1483 aaKnown RBP16.64■□□□□ 0.26
PDLIM5-206ENST00000437932 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
PDLIM5-206ENST00000437932 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
PDLIM5-206ENST00000437932 CEP164Q9UPV0 1460 aa16.57■□□□□ 0.24
PDLIM5-206ENST00000437932 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
PDLIM5-206ENST00000437932 KANK4Q5T7N3 995 aaPredicted RBP16.54■□□□□ 0.24
PDLIM5-206ENST00000437932 SMARCA4P51532 1647 aa16.54■□□□□ 0.24
PDLIM5-206ENST00000437932 EEA1Q15075 1411 aa16.53■□□□□ 0.24
PDLIM5-206ENST00000437932 ANP32CO43423 234 aa16.52■□□□□ 0.24
PDLIM5-206ENST00000437932 CHIC2Q9UKJ5 165 aa16.51■□□□□ 0.23
PDLIM5-206ENST00000437932 FKBP8Q14318 412 aa16.48■□□□□ 0.23
PDLIM5-206ENST00000437932 SIN3AQ96ST3 1273 aa16.46■□□□□ 0.23
PDLIM5-206ENST00000437932 FBLN2P98095 1184 aa16.46■□□□□ 0.23
PDLIM5-206ENST00000437932 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
PDLIM5-206ENST00000437932 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
PDLIM5-206ENST00000437932 IRX6P78412 446 aaPredicted RBP16.4■□□□□ 0.22
PDLIM5-206ENST00000437932 SENP3-EIF4A1A0A087X0R7 540 aa16.38■□□□□ 0.21
PDLIM5-206ENST00000437932 ZNF777Q9ULD5 760 aaPredicted RBP16.38■□□□□ 0.21
PDLIM5-206ENST00000437932 VPS8Q8N3P4 1428 aa16.38■□□□□ 0.21
PDLIM5-206ENST00000437932 MYT1Q01538 1121 aa16.36■□□□□ 0.21
PDLIM5-206ENST00000437932 KIF27Q86VH2 1401 aa16.35■□□□□ 0.21
PDLIM5-206ENST00000437932 TONSLQ96HA7 1378 aa16.35■□□□□ 0.21
PDLIM5-206ENST00000437932 RRP7BPQ9NSQ0 103 aa16.34■□□□□ 0.21
PDLIM5-206ENST00000437932 MYT1LQ9UL68 1186 aa16.33■□□□□ 0.2
PDLIM5-206ENST00000437932 HNRNPUQ00839 825 aaKnown RBP eCLIP16.29■□□□□ 0.2
PDLIM5-206ENST00000437932 FAM9BQ8IZU0 186 aa16.29■□□□□ 0.2
PDLIM5-206ENST00000437932 CUX2O14529 1486 aa16.28■□□□□ 0.2
PDLIM5-206ENST00000437932 KCNH8Q96L42 1107 aa16.28■□□□□ 0.2
PDLIM5-206ENST00000437932 ATAD2BQ9ULI0 1458 aa16.26■□□□□ 0.19
PDLIM5-206ENST00000437932 CCNB3Q8WWL7 1395 aa16.26■□□□□ 0.19
PDLIM5-206ENST00000437932 MTUS2Q5JR59 1369 aa16.25■□□□□ 0.19
PDLIM5-206ENST00000437932 SUPT16HQ9Y5B9 1047 aaKnown RBP16.24■□□□□ 0.19
PDLIM5-206ENST00000437932 SYNJ1O43426 1573 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms