RNA–Protein interactions for RNA: ENST00000471386.2

FOXP1-207, Transcript of forkhead box P1, humanhuman

TSL 1 (best)

Gene FOXP1, Length 299 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP1-207ENST00000471386 NISCHQ9Y2I1 1504 aa62.74■■■■■ 7.63
FOXP1-207ENST00000471386 CCDC180Q9P1Z9 1646 aa55.87■■■■■ 6.53
FOXP1-207ENST00000471386 ABCC9O60706 1549 aa55■■■■■ 6.4
FOXP1-207ENST00000471386 RB1CC1Q8TDY2 1594 aa52.72■■■■■ 6.03
FOXP1-207ENST00000471386 DCAF8L2P0C7V8 631 aa52.58■■■■■ 6.01
FOXP1-207ENST00000471386 NACADO15069 1562 aa52.58■■■■■ 6.01
FOXP1-207ENST00000471386 ZCCHC6Q5VYS8 1495 aaKnown RBP52.19■■■■■ 5.95
FOXP1-207ENST00000471386 MYO15BQ96JP2 1530 aa52.13■■■■■ 5.94
FOXP1-207ENST00000471386 DCAF1Q9Y4B6 1507 aa51.83■■■■■ 5.89
FOXP1-207ENST00000471386 UNC13AQ9UPW8 1703 aa51.67■■■■■ 5.86
FOXP1-207ENST00000471386 PABPN1Q86U42 306 aaKnown RBP eCLIP51.38■■■■■ 5.82
FOXP1-207ENST00000471386 BICRAQ9NZM4 1560 aa51.22■■■■■ 5.79
FOXP1-207ENST00000471386 SCRIBQ14160 1630 aa51.03■■■■■ 5.76
FOXP1-207ENST00000471386 DNAJC5BQ9UF47 199 aa50.8■■■■■ 5.72
FOXP1-207ENST00000471386 SHROOM4Q9ULL8 1493 aa50.47■■■■■ 5.67
FOXP1-207ENST00000471386 EIF4G1Q04637 1599 aaKnown RBP49.84■■■■■ 5.57
FOXP1-207ENST00000471386 CC2D2AQ9P2K1 1620 aa49.74■■■■■ 5.55
FOXP1-207ENST00000471386 CECR2Q9BXF3 1484 aa49.41■■■■■ 5.5
FOXP1-207ENST00000471386 SMARCA4P51532 1647 aa48.76■■■■■ 5.4
FOXP1-207ENST00000471386 BAZ1AQ9NRL2 1556 aaPredicted RBP48.61■■■■■ 5.37
FOXP1-207ENST00000471386 ATAD2BQ9ULI0 1458 aa48.55■■■■■ 5.36
FOXP1-207ENST00000471386 NCAPD3P42695 1498 aa48.53■■■■■ 5.36
FOXP1-207ENST00000471386 SMARCA2P51531 1590 aa48.43■■■■■ 5.34
FOXP1-207ENST00000471386 MROH2BQ7Z745 1585 aa48.39■■■■■ 5.34
FOXP1-207ENST00000471386 HMGXB3Q12766 1538 aa48.26■■■■■ 5.32
FOXP1-207ENST00000471386 PEG3Q9GZU2 1588 aa48.24■■■■■ 5.31
FOXP1-207ENST00000471386 BAZ1BQ9UIG0 1483 aaKnown RBP48.11■■■■■ 5.29
FOXP1-207ENST00000471386 WIZO95785 1651 aa47.89■■■■■ 5.26
FOXP1-207ENST00000471386 RSF1Q96T23 1441 aaPredicted RBP47.71■■■■■ 5.23
FOXP1-207ENST00000471386 NESP48681 1621 aa47.56■■■■■ 5.2
FOXP1-207ENST00000471386 ERCC6Q03468 1493 aa47.36■■■■■ 5.17
FOXP1-207ENST00000471386 LAMC3Q9Y6N6 1575 aa47.29■■■■■ 5.16
FOXP1-207ENST00000471386 TOP2AP11388 1531 aaKnown RBP47.28■■■■■ 5.16
FOXP1-207ENST00000471386 CADPSQ9ULU8 1353 aa47.11■■■■■ 5.13
FOXP1-207ENST00000471386 KIF21AQ7Z4S6 1674 aa46.99■■■■■ 5.11
FOXP1-207ENST00000471386 PDS5BQ9NTI5 1447 aa46.96■■■■■ 5.11
FOXP1-207ENST00000471386 CUX2O14529 1486 aa46.94■■■■■ 5.1
FOXP1-207ENST00000471386 THOC2Q8NI27 1593 aaKnown RBP46.86■■■■■ 5.09
FOXP1-207ENST00000471386 CFTRP13569 1480 aa46.77■■■■■ 5.08
FOXP1-207ENST00000471386 CCDC88BA6NC98 1476 aa46.76■■■■■ 5.08
FOXP1-207ENST00000471386 FANCD2Q9BXW9 1451 aa46.58■■■■■ 5.05
FOXP1-207ENST00000471386 MRC2Q9UBG0 1479 aa46.53■■■■■ 5.04
FOXP1-207ENST00000471386 CEP164Q9UPV0 1460 aa46.53■■■■■ 5.04
FOXP1-207ENST00000471386 PRDM2Q13029 1718 aa46.45■■■■■ 5.03
FOXP1-207ENST00000471386 WDR62O43379 1518 aa46.39■■■■■ 5.02
FOXP1-207ENST00000471386 SUPT5HO00267 1087 aaKnown RBP46.34■■■■■ 5.01
FOXP1-207ENST00000471386 URB2Q14146 1524 aaKnown RBP46.18■■■■■ 4.98
FOXP1-207ENST00000471386 DNAJC5Q9H3Z4 198 aa45.87■■■■■ 4.93
FOXP1-207ENST00000471386 TOPBP1Q92547 1522 aa45.82■■■■■ 4.93
FOXP1-207ENST00000471386 DNMBPQ6XZF7 1577 aa45.73■■■■■ 4.91
FOXP1-207ENST00000471386 ABCC8Q09428 1581 aa45.71■■■■■ 4.91
FOXP1-207ENST00000471386 IFT140Q96RY7 1462 aa45.55■■■■■ 4.88
FOXP1-207ENST00000471386 ZNF608Q9ULD9 1512 aaPredicted RBP45.47■■■■■ 4.87
FOXP1-207ENST00000471386 POLA1P09884 1462 aaPredicted RBP45.42■■■■■ 4.86
FOXP1-207ENST00000471386 CUX1P39880 1505 aa45.41■■■■■ 4.86
FOXP1-207ENST00000471386 TARBP1Q13395 1621 aaKnown RBP45.37■■■■■ 4.85
FOXP1-207ENST00000471386 FGD5Q6ZNL6 1462 aa45.28■■■■■ 4.84
FOXP1-207ENST00000471386 RAD54L2Q9Y4B4 1467 aa45.27■■■■■ 4.84
FOXP1-207ENST00000471386 EIF4G3O43432 1585 aaKnown RBP45.24■■■■■ 4.83
FOXP1-207ENST00000471386 SOGA1O94964 1423 aa45.21■■■■■ 4.83
FOXP1-207ENST00000471386 AQRO60306 1485 aaKnown RBP eCLIP45.17■■■■■ 4.823e-6■■■□□ 15.7
FOXP1-207ENST00000471386 TDRD9Q8NDG6 1382 aaKnown RBP45.03■■■■■ 4.8
FOXP1-207ENST00000471386 OSCARQ8IYS5 282 aa44.97■■■■■ 4.79
FOXP1-207ENST00000471386 WRNQ14191 1432 aaPredicted RBP eCLIP44.96■■■■■ 4.79
FOXP1-207ENST00000471386 WDR97A6NE52 1622 aa44.94■■■■■ 4.79
FOXP1-207ENST00000471386 SYNJ1O43426 1573 aa44.94■■■■■ 4.78
FOXP1-207ENST00000471386 BIVM-ERCC5R4GMW8 1640 aa44.93■■■■■ 4.78
FOXP1-207ENST00000471386 TOP2BQ02880 1626 aa44.91■■■■■ 4.78
FOXP1-207ENST00000471386 ABCA10Q8WWZ4 1543 aa44.8■■■■■ 4.76
FOXP1-207ENST00000471386 CHD1O14646 1710 aa44.78■■■■■ 4.76
FOXP1-207ENST00000471386 SNAPC4Q5SXM2 1469 aa44.71■■■■■ 4.75
FOXP1-207ENST00000471386 GRIN2BQ13224 1484 aa44.69■■■■■ 4.74
FOXP1-207ENST00000471386 GAPVD1Q14C86 1478 aa44.68■■■■■ 4.74
FOXP1-207ENST00000471386 ABCA5Q8WWZ7 1642 aa44.67■■■■■ 4.74
FOXP1-207ENST00000471386 PBRM1Q86U86 1689 aa44.67■■■■■ 4.74
FOXP1-207ENST00000471386 FBLN2P98095 1184 aa44.65■■■■■ 4.74
FOXP1-207ENST00000471386 MAGI1Q96QZ7 1491 aaPredicted RBP44.58■■■■■ 4.73
FOXP1-207ENST00000471386 CHMP7Q8WUX9 453 aaPredicted RBP44.45■■■■■ 4.71
FOXP1-207ENST00000471386 SYNJ2O15056 1496 aa44.43■■■■■ 4.7
FOXP1-207ENST00000471386 RIMBP3CA6NJZ7 1639 aa44.35■■■■■ 4.69
FOXP1-207ENST00000471386 RIMBP3BA6NNM3 1639 aa44.35■■■■■ 4.69
FOXP1-207ENST00000471386 RIMBP3Q9UFD9 1639 aa44.35■■■■■ 4.69
FOXP1-207ENST00000471386 TRIM41Q8WV44 630 aa44.3■■■■■ 4.68
FOXP1-207ENST00000471386 ARHGEF11O15085 1522 aa44.28■■■■■ 4.68
FOXP1-207ENST00000471386 ADAMTS12P58397 1594 aa44.26■■■■■ 4.68
FOXP1-207ENST00000471386 ERICH3Q5RHP9 1530 aa44.24■■■■■ 4.67
FOXP1-207ENST00000471386 CLASP1Q7Z460 1538 aa44.23■■■■■ 4.67
FOXP1-207ENST00000471386 GRIN2AQ12879 1464 aa44.14■■■■■ 4.66
FOXP1-207ENST00000471386 FHAD1B1AJZ9 1412 aa44.13■■■■■ 4.65
FOXP1-207ENST00000471386 KIF27Q86VH2 1401 aa44.01■■■■■ 4.64
FOXP1-207ENST00000471386 CEP170Q5SW79 1584 aa43.97■■■■■ 4.63
FOXP1-207ENST00000471386 NUP160Q12769 1436 aa43.95■■■■■ 4.63
FOXP1-207ENST00000471386 IGF1RP08069 1367 aa43.92■■■■■ 4.62
FOXP1-207ENST00000471386 ARAP1Q96P48 1450 aa43.92■■■■■ 4.62
FOXP1-207ENST00000471386 CYB5RLQ6IPT4 315 aa43.9■■■■■ 4.62
FOXP1-207ENST00000471386 CUL7Q14999 1698 aa43.78■■■■■ 4.6
FOXP1-207ENST00000471386 ERCC6L2Q5T890 1561 aa43.68■■■■■ 4.58
FOXP1-207ENST00000471386 RUSC2Q8N2Y8 1516 aa43.68■■■■■ 4.58
FOXP1-207ENST00000471386 SHROOM2Q13796 1616 aa43.67■■■■■ 4.58
FOXP1-207ENST00000471386 CARMIL1Q5VZK9 1371 aa43.65■■■■■ 4.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms