RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 NISCHQ9Y2I1 1504 aa21.52■■□□□ 1.04
PDLIM5-207ENST00000503974 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
PDLIM5-207ENST00000503974 ABCC9O60706 1549 aa18.25■□□□□ 0.51
PDLIM5-207ENST00000503974 ZCCHC6Q5VYS8 1495 aaKnown RBP18.02■□□□□ 0.47
PDLIM5-207ENST00000503974 DCAF1Q9Y4B6 1507 aa17.88■□□□□ 0.45
PDLIM5-207ENST00000503974 MYO15BQ96JP2 1530 aa17.86■□□□□ 0.45
PDLIM5-207ENST00000503974 NACADO15069 1562 aa17.82■□□□□ 0.44
PDLIM5-207ENST00000503974 RB1CC1Q8TDY2 1594 aa17.75■□□□□ 0.43
PDLIM5-207ENST00000503974 DCAF8L2P0C7V8 631 aa17.66■□□□□ 0.42
PDLIM5-207ENST00000503974 UNC13AQ9UPW8 1703 aa17.39■□□□□ 0.37
PDLIM5-207ENST00000503974 SCRIBQ14160 1630 aa17.33■□□□□ 0.37
PDLIM5-207ENST00000503974 BICRAQ9NZM4 1560 aa17.24■□□□□ 0.35
PDLIM5-207ENST00000503974 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-207ENST00000503974 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
PDLIM5-207ENST00000503974 PABPN1Q86U42 306 aaKnown RBP eCLIP17.05■□□□□ 0.32
PDLIM5-207ENST00000503974 MYT1Q01538 1121 aa16.97■□□□□ 0.31
PDLIM5-207ENST00000503974 EIF4G1Q04637 1599 aaKnown RBP16.73■□□□□ 0.27
PDLIM5-207ENST00000503974 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
PDLIM5-207ENST00000503974 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
PDLIM5-207ENST00000503974 SMARCA4P51532 1647 aa16.65■□□□□ 0.26
PDLIM5-207ENST00000503974 MROH2BQ7Z745 1585 aa16.58■□□□□ 0.24
PDLIM5-207ENST00000503974 CC2D2AQ9P2K1 1620 aa16.58■□□□□ 0.24
PDLIM5-207ENST00000503974 PEG3Q9GZU2 1588 aa16.53■□□□□ 0.24
PDLIM5-207ENST00000503974 RSF1Q96T23 1441 aaPredicted RBP16.48■□□□□ 0.23
PDLIM5-207ENST00000503974 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
PDLIM5-207ENST00000503974 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
PDLIM5-207ENST00000503974 ATAD2BQ9ULI0 1458 aa16.47■□□□□ 0.23
PDLIM5-207ENST00000503974 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
PDLIM5-207ENST00000503974 WIZO95785 1651 aa16.41■□□□□ 0.22
PDLIM5-207ENST00000503974 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
PDLIM5-207ENST00000503974 TTBK1Q5TCY1 1321 aaPredicted RBP16.38■□□□□ 0.21
PDLIM5-207ENST00000503974 BAZ1BQ9UIG0 1483 aaKnown RBP16.33■□□□□ 0.2
PDLIM5-207ENST00000503974 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
PDLIM5-207ENST00000503974 SUPT5HO00267 1087 aaKnown RBP16.14■□□□□ 0.17
PDLIM5-207ENST00000503974 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
PDLIM5-207ENST00000503974 PRKCSHP14314 528 aaPredicted RBP15.97■□□□□ 0.15
PDLIM5-207ENST00000503974 LAMC3Q9Y6N6 1575 aa15.96■□□□□ 0.15
PDLIM5-207ENST00000503974 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
PDLIM5-207ENST00000503974 CFTRP13569 1480 aa15.93■□□□□ 0.14
PDLIM5-207ENST00000503974 NESP48681 1621 aa15.9■□□□□ 0.14
PDLIM5-207ENST00000503974 PRDM2Q13029 1718 aa15.89■□□□□ 0.13
PDLIM5-207ENST00000503974 PDS5BQ9NTI5 1447 aa15.78■□□□□ 0.12
PDLIM5-207ENST00000503974 KIF21AQ7Z4S6 1674 aa15.77■□□□□ 0.11
PDLIM5-207ENST00000503974 FANCD2Q9BXW9 1451 aa15.75■□□□□ 0.11
PDLIM5-207ENST00000503974 HRCP23327 699 aa15.74■□□□□ 0.11
PDLIM5-207ENST00000503974 CEP164Q9UPV0 1460 aa15.7■□□□□ 0.1
PDLIM5-207ENST00000503974 ERCC6Q03468 1493 aa15.7■□□□□ 0.1
PDLIM5-207ENST00000503974 APLP2Q06481 763 aa15.67■□□□□ 0.1
PDLIM5-207ENST00000503974 THOC2Q8NI27 1593 aaKnown RBP15.67■□□□□ 0.1
PDLIM5-207ENST00000503974 ERICH6Q7L0X2 663 aa15.64■□□□□ 0.09
PDLIM5-207ENST00000503974 MRC2Q9UBG0 1479 aa15.64■□□□□ 0.09
PDLIM5-207ENST00000503974 SLC24A1O60721 1099 aa15.63■□□□□ 0.09
PDLIM5-207ENST00000503974 WDR62O43379 1518 aa15.61■□□□□ 0.09
PDLIM5-207ENST00000503974 URB2Q14146 1524 aaKnown RBP15.59■□□□□ 0.09
PDLIM5-207ENST00000503974 DNMBPQ6XZF7 1577 aa15.57■□□□□ 0.08
PDLIM5-207ENST00000503974 ABCC8Q09428 1581 aa15.56■□□□□ 0.08
PDLIM5-207ENST00000503974 TOPBP1Q92547 1522 aa15.55■□□□□ 0.08
PDLIM5-207ENST00000503974 SCAF1Q9H7N4 1312 aaKnown RBP15.54■□□□□ 0.08
PDLIM5-207ENST00000503974 CUX1P39880 1505 aa15.54■□□□□ 0.08
PDLIM5-207ENST00000503974 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.08
PDLIM5-207ENST00000503974 BIVM-ERCC5R4GMW8 1640 aa15.52■□□□□ 0.07
PDLIM5-207ENST00000503974 BCL11AQ9H165 835 aa15.52■□□□□ 0.07
PDLIM5-207ENST00000503974 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
PDLIM5-207ENST00000503974 CUX2O14529 1486 aa15.5■□□□□ 0.07
PDLIM5-207ENST00000503974 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
PDLIM5-207ENST00000503974 POLA1P09884 1462 aaPredicted RBP15.44■□□□□ 0.06
PDLIM5-207ENST00000503974 FGD5Q6ZNL6 1462 aa15.43■□□□□ 0.06
PDLIM5-207ENST00000503974 TARBP1Q13395 1621 aaKnown RBP15.38■□□□□ 0.05
PDLIM5-207ENST00000503974 IFT140Q96RY7 1462 aa15.38■□□□□ 0.05
PDLIM5-207ENST00000503974 WDR97A6NE52 1622 aa15.36■□□□□ 0.05
PDLIM5-207ENST00000503974 FAM9AQ8IZU1 332 aaPredicted RBP15.33■□□□□ 0.04
PDLIM5-207ENST00000503974 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.04
PDLIM5-207ENST00000503974 SOGA1O94964 1423 aa15.33■□□□□ 0.04
PDLIM5-207ENST00000503974 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
PDLIM5-207ENST00000503974 CHIC1Q5VXU3 224 aa15.3■□□□□ 0.04
PDLIM5-207ENST00000503974 TRIM41Q8WV44 630 aa15.26■□□□□ 0.03
PDLIM5-207ENST00000503974 ZNF608Q9ULD9 1512 aaPredicted RBP15.26■□□□□ 0.03
PDLIM5-207ENST00000503974 ABCA5Q8WWZ7 1642 aa15.26■□□□□ 0.03
PDLIM5-207ENST00000503974 EIF4G3O43432 1585 aaKnown RBP15.26■□□□□ 0.03
PDLIM5-207ENST00000503974 TDRD9Q8NDG6 1382 aaKnown RBP15.19■□□□□ 0.02
PDLIM5-207ENST00000503974 AQRO60306 1485 aaKnown RBP eCLIP15.19■□□□□ 0.02
PDLIM5-207ENST00000503974 PPARGC1BQ86YN6 1023 aaKnown RBP15.18■□□□□ 0.02
PDLIM5-207ENST00000503974 PBRM1Q86U86 1689 aa15.18■□□□□ 0.02
PDLIM5-207ENST00000503974 GAPVD1Q14C86 1478 aa15.17■□□□□ 0.02
PDLIM5-207ENST00000503974 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
PDLIM5-207ENST00000503974 GRIN2BQ13224 1484 aa15.15■□□□□ 0.02
PDLIM5-207ENST00000503974 ERICH3Q5RHP9 1530 aa15.14■□□□□ 0.01
PDLIM5-207ENST00000503974 RUSC2Q8N2Y8 1516 aa15.11■□□□□ 0.01
PDLIM5-207ENST00000503974 MAGI1Q96QZ7 1491 aaPredicted RBP15.1■□□□□ 0.01
PDLIM5-207ENST00000503974 EEA1Q15075 1411 aa15.1■□□□□ 0.01
PDLIM5-207ENST00000503974 SNAPC4Q5SXM2 1469 aa15.08■□□□□ 0.01
PDLIM5-207ENST00000503974 ADAMTS12P58397 1594 aa15.08■□□□□ 0
PDLIM5-207ENST00000503974 CUL7Q14999 1698 aa15.07■□□□□ 0
PDLIM5-207ENST00000503974 IGF1RP08069 1367 aa15.06■□□□□ 0
PDLIM5-207ENST00000503974 SYNJ2O15056 1496 aa15.03■□□□□ -0
PDLIM5-207ENST00000503974 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
PDLIM5-207ENST00000503974 CHD1O14646 1710 aa15□□□□□ -0.01
PDLIM5-207ENST00000503974 DAXXQ9UER7 740 aaPredicted RBP14.99□□□□□ -0.01
PDLIM5-207ENST00000503974 PRXQ9BXM0 1461 aa14.99□□□□□ -0.01
PDLIM5-207ENST00000503974 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms