RNA–Protein interactions for RNA: ENST00000481400.5

C3orf35-208, Transcript of chromosome 3 open reading frame 35, humanhuman

TSL 1 (best)

Gene C3orf35, Length 1,495 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf35-208ENST00000481400 NISCHQ9Y2I1 1504 aa33.42■■■□□ 2.94
C3orf35-208ENST00000481400 CCDC180Q9P1Z9 1646 aa29.66■■■□□ 2.34
C3orf35-208ENST00000481400 ABCC9O60706 1549 aa29.18■■■□□ 2.26
C3orf35-208ENST00000481400 RB1CC1Q8TDY2 1594 aa27.93■■■□□ 2.06
C3orf35-208ENST00000481400 DCAF8L2P0C7V8 631 aa27.91■■■□□ 2.06
C3orf35-208ENST00000481400 NACADO15069 1562 aa27.88■■■□□ 2.05
C3orf35-208ENST00000481400 ZCCHC6Q5VYS8 1495 aaKnown RBP27.84■■■□□ 2.05
C3orf35-208ENST00000481400 MYO15BQ96JP2 1530 aa27.67■■■□□ 2.02
C3orf35-208ENST00000481400 DCAF1Q9Y4B6 1507 aa27.56■■■□□ 2
C3orf35-208ENST00000481400 UNC13AQ9UPW8 1703 aa27.45■■□□□ 1.99
C3orf35-208ENST00000481400 PABPN1Q86U42 306 aaKnown RBP eCLIP27.29■■□□□ 1.96
C3orf35-208ENST00000481400 BICRAQ9NZM4 1560 aa27.25■■□□□ 1.95
C3orf35-208ENST00000481400 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
C3orf35-208ENST00000481400 DNAJC5BQ9UF47 199 aa26.95■■□□□ 1.91
C3orf35-208ENST00000481400 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
C3orf35-208ENST00000481400 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.82
C3orf35-208ENST00000481400 CC2D2AQ9P2K1 1620 aa26.38■■□□□ 1.81
C3orf35-208ENST00000481400 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
C3orf35-208ENST00000481400 SMARCA4P51532 1647 aa25.95■■□□□ 1.74
C3orf35-208ENST00000481400 BAZ1AQ9NRL2 1556 aaPredicted RBP25.84■■□□□ 1.73
C3orf35-208ENST00000481400 MROH2BQ7Z745 1585 aa25.82■■□□□ 1.72
C3orf35-208ENST00000481400 ATAD2BQ9ULI0 1458 aa25.82■■□□□ 1.72
C3orf35-208ENST00000481400 NCAPD3P42695 1498 aa25.77■■□□□ 1.72
C3orf35-208ENST00000481400 SMARCA2P51531 1590 aa25.7■■□□□ 1.7
C3orf35-208ENST00000481400 PEG3Q9GZU2 1588 aa25.67■■□□□ 1.7
C3orf35-208ENST00000481400 HMGXB3Q12766 1538 aa25.62■■□□□ 1.69
C3orf35-208ENST00000481400 BAZ1BQ9UIG0 1483 aaKnown RBP25.55■■□□□ 1.68
C3orf35-208ENST00000481400 WIZO95785 1651 aa25.55■■□□□ 1.68
C3orf35-208ENST00000481400 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
C3orf35-208ENST00000481400 NESP48681 1621 aa25.3■■□□□ 1.64
C3orf35-208ENST00000481400 TOP2AP11388 1531 aaKnown RBP25.19■■□□□ 1.62
C3orf35-208ENST00000481400 LAMC3Q9Y6N6 1575 aa25.06■■□□□ 1.6
C3orf35-208ENST00000481400 ERCC6Q03468 1493 aa25.05■■□□□ 1.6
C3orf35-208ENST00000481400 CADPSQ9ULU8 1353 aa25.01■■□□□ 1.59
C3orf35-208ENST00000481400 KIF21AQ7Z4S6 1674 aa24.95■■□□□ 1.58
C3orf35-208ENST00000481400 CCDC88BA6NC98 1476 aa24.94■■□□□ 1.58
C3orf35-208ENST00000481400 SUPT5HO00267 1087 aaKnown RBP24.94■■□□□ 1.58
C3orf35-208ENST00000481400 CFTRP13569 1480 aa24.87■■□□□ 1.57
C3orf35-208ENST00000481400 THOC2Q8NI27 1593 aaKnown RBP24.87■■□□□ 1.57
C3orf35-208ENST00000481400 PDS5BQ9NTI5 1447 aa24.86■■□□□ 1.57
C3orf35-208ENST00000481400 CUX2O14529 1486 aa24.78■■□□□ 1.56
C3orf35-208ENST00000481400 FANCD2Q9BXW9 1451 aa24.75■■□□□ 1.55
C3orf35-208ENST00000481400 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
C3orf35-208ENST00000481400 MRC2Q9UBG0 1479 aa24.67■■□□□ 1.54
C3orf35-208ENST00000481400 PRDM2Q13029 1718 aa24.66■■□□□ 1.54
C3orf35-208ENST00000481400 WDR62O43379 1518 aa24.62■■□□□ 1.53
C3orf35-208ENST00000481400 URB2Q14146 1524 aaKnown RBP24.57■■□□□ 1.52
C3orf35-208ENST00000481400 TOPBP1Q92547 1522 aa24.37■■□□□ 1.49
C3orf35-208ENST00000481400 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
C3orf35-208ENST00000481400 CUX1P39880 1505 aa24.22■■□□□ 1.47
C3orf35-208ENST00000481400 ABCC8Q09428 1581 aa24.2■■□□□ 1.47
C3orf35-208ENST00000481400 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.46
C3orf35-208ENST00000481400 POLA1P09884 1462 aaPredicted RBP24.16■■□□□ 1.46
C3orf35-208ENST00000481400 IFT140Q96RY7 1462 aa24.16■■□□□ 1.46
C3orf35-208ENST00000481400 TARBP1Q13395 1621 aaKnown RBP24.14■■□□□ 1.45
C3orf35-208ENST00000481400 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
C3orf35-208ENST00000481400 RAD54L2Q9Y4B4 1467 aa24.12■■□□□ 1.45
C3orf35-208ENST00000481400 FGD5Q6ZNL6 1462 aa24.1■■□□□ 1.45
C3orf35-208ENST00000481400 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
C3orf35-208ENST00000481400 AQRO60306 1485 aaKnown RBP eCLIP24.02■■□□□ 1.44
C3orf35-208ENST00000481400 SOGA1O94964 1423 aa24.02■■□□□ 1.44
C3orf35-208ENST00000481400 SYNJ1O43426 1573 aa24■■□□□ 1.43
C3orf35-208ENST00000481400 WRNQ14191 1432 aaPredicted RBP eCLIP23.95■■□□□ 1.42
C3orf35-208ENST00000481400 TDRD9Q8NDG6 1382 aaKnown RBP23.95■■□□□ 1.42
C3orf35-208ENST00000481400 BIVM-ERCC5R4GMW8 1640 aa23.93■■□□□ 1.42
C3orf35-208ENST00000481400 WDR97A6NE52 1622 aa23.93■■□□□ 1.42
C3orf35-208ENST00000481400 TOP2BQ02880 1626 aa23.93■■□□□ 1.42
C3orf35-208ENST00000481400 ABCA10Q8WWZ4 1543 aa23.83■■□□□ 1.4
C3orf35-208ENST00000481400 ABCA5Q8WWZ7 1642 aa23.79■■□□□ 1.4
C3orf35-208ENST00000481400 CHD1O14646 1710 aa23.76■■□□□ 1.39
C3orf35-208ENST00000481400 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
C3orf35-208ENST00000481400 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
C3orf35-208ENST00000481400 OSCARQ8IYS5 282 aa23.74■■□□□ 1.39
C3orf35-208ENST00000481400 PBRM1Q86U86 1689 aa23.73■■□□□ 1.39
C3orf35-208ENST00000481400 GRIN2BQ13224 1484 aa23.72■■□□□ 1.39
C3orf35-208ENST00000481400 FBLN2P98095 1184 aa23.65■■□□□ 1.38
C3orf35-208ENST00000481400 MAGI1Q96QZ7 1491 aaPredicted RBP23.65■■□□□ 1.38
C3orf35-208ENST00000481400 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
C3orf35-208ENST00000481400 SYNJ2O15056 1496 aa23.58■■□□□ 1.37
C3orf35-208ENST00000481400 ADAMTS12P58397 1594 aa23.55■■□□□ 1.36
C3orf35-208ENST00000481400 CHMP7Q8WUX9 453 aaPredicted RBP23.54■■□□□ 1.36
C3orf35-208ENST00000481400 TRIM41Q8WV44 630 aa23.5■■□□□ 1.35
C3orf35-208ENST00000481400 ERICH3Q5RHP9 1530 aa23.5■■□□□ 1.35
C3orf35-208ENST00000481400 CLASP1Q7Z460 1538 aa23.49■■□□□ 1.35
C3orf35-208ENST00000481400 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
C3orf35-208ENST00000481400 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
C3orf35-208ENST00000481400 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
C3orf35-208ENST00000481400 GRIN2AQ12879 1464 aa23.45■■□□□ 1.35
C3orf35-208ENST00000481400 ARHGEF11O15085 1522 aa23.45■■□□□ 1.34
C3orf35-208ENST00000481400 FHAD1B1AJZ9 1412 aa23.44■■□□□ 1.34
C3orf35-208ENST00000481400 IGF1RP08069 1367 aa23.42■■□□□ 1.34
C3orf35-208ENST00000481400 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
C3orf35-208ENST00000481400 KIF27Q86VH2 1401 aa23.41■■□□□ 1.34
C3orf35-208ENST00000481400 RUSC2Q8N2Y8 1516 aa23.4■■□□□ 1.34
C3orf35-208ENST00000481400 NUP160Q12769 1436 aa23.36■■□□□ 1.33
C3orf35-208ENST00000481400 ARAP1Q96P48 1450 aa23.3■■□□□ 1.32
C3orf35-208ENST00000481400 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
C3orf35-208ENST00000481400 CUL7Q14999 1698 aa23.27■■□□□ 1.32
C3orf35-208ENST00000481400 CARMIL1Q5VZK9 1371 aa23.22■■□□□ 1.31
C3orf35-208ENST00000481400 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms