RNA–Protein interactions for RNA: ENST00000466204.5

C3orf35-207, Transcript of chromosome 3 open reading frame 35, humanhuman

TSL 1 (best)

Gene C3orf35, Length 1,398 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf35-207ENST00000466204 NISCHQ9Y2I1 1504 aa33.34■■■□□ 2.93
C3orf35-207ENST00000466204 CCDC180Q9P1Z9 1646 aa29.37■■■□□ 2.29
C3orf35-207ENST00000466204 ABCC9O60706 1549 aa28.41■■■□□ 2.14
C3orf35-207ENST00000466204 ZCCHC6Q5VYS8 1495 aaKnown RBP27.85■■■□□ 2.05
C3orf35-207ENST00000466204 DCAF8L2P0C7V8 631 aa27.71■■■□□ 2.03
C3orf35-207ENST00000466204 DCAF1Q9Y4B6 1507 aa27.62■■■□□ 2.01
C3orf35-207ENST00000466204 MYO15BQ96JP2 1530 aa27.6■■■□□ 2.01
C3orf35-207ENST00000466204 NACADO15069 1562 aa27.59■■■□□ 2.01
C3orf35-207ENST00000466204 RB1CC1Q8TDY2 1594 aa27.49■■□□□ 1.99
C3orf35-207ENST00000466204 SCRIBQ14160 1630 aa26.84■■□□□ 1.89
C3orf35-207ENST00000466204 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
C3orf35-207ENST00000466204 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
C3orf35-207ENST00000466204 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
C3orf35-207ENST00000466204 SHROOM4Q9ULL8 1493 aa26.56■■□□□ 1.84
C3orf35-207ENST00000466204 CECR2Q9BXF3 1484 aa25.95■■□□□ 1.75
C3orf35-207ENST00000466204 EIF4G1Q04637 1599 aaKnown RBP25.91■■□□□ 1.74
C3orf35-207ENST00000466204 DNAJC5BQ9UF47 199 aa25.82■■□□□ 1.72
C3orf35-207ENST00000466204 BAZ1AQ9NRL2 1556 aaPredicted RBP25.79■■□□□ 1.72
C3orf35-207ENST00000466204 SMARCA4P51532 1647 aa25.73■■□□□ 1.71
C3orf35-207ENST00000466204 MROH2BQ7Z745 1585 aa25.7■■□□□ 1.71
C3orf35-207ENST00000466204 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.7
C3orf35-207ENST00000466204 RSF1Q96T23 1441 aaPredicted RBP25.6■■□□□ 1.69
C3orf35-207ENST00000466204 ATAD2BQ9ULI0 1458 aa25.56■■□□□ 1.68
C3orf35-207ENST00000466204 PEG3Q9GZU2 1588 aa25.51■■□□□ 1.68
C3orf35-207ENST00000466204 NCAPD3P42695 1498 aa25.51■■□□□ 1.67
C3orf35-207ENST00000466204 SMARCA2P51531 1590 aa25.5■■□□□ 1.67
C3orf35-207ENST00000466204 WIZO95785 1651 aa25.39■■□□□ 1.65
C3orf35-207ENST00000466204 HMGXB3Q12766 1538 aa25.35■■□□□ 1.65
C3orf35-207ENST00000466204 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
C3orf35-207ENST00000466204 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
C3orf35-207ENST00000466204 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
C3orf35-207ENST00000466204 CCDC88BA6NC98 1476 aa24.93■■□□□ 1.58
C3orf35-207ENST00000466204 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
C3orf35-207ENST00000466204 NESP48681 1621 aa24.72■■□□□ 1.55
C3orf35-207ENST00000466204 CFTRP13569 1480 aa24.71■■□□□ 1.55
C3orf35-207ENST00000466204 LAMC3Q9Y6N6 1575 aa24.69■■□□□ 1.54
C3orf35-207ENST00000466204 PDS5BQ9NTI5 1447 aa24.56■■□□□ 1.52
C3orf35-207ENST00000466204 FANCD2Q9BXW9 1451 aa24.46■■□□□ 1.51
C3orf35-207ENST00000466204 ERCC6Q03468 1493 aa24.43■■□□□ 1.5
C3orf35-207ENST00000466204 PRDM2Q13029 1718 aa24.38■■□□□ 1.49
C3orf35-207ENST00000466204 CEP164Q9UPV0 1460 aa24.36■■□□□ 1.49
C3orf35-207ENST00000466204 KIF21AQ7Z4S6 1674 aa24.34■■□□□ 1.49
C3orf35-207ENST00000466204 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
C3orf35-207ENST00000466204 THOC2Q8NI27 1593 aaKnown RBP24.21■■□□□ 1.47
C3orf35-207ENST00000466204 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
C3orf35-207ENST00000466204 WDR62O43379 1518 aa24.15■■□□□ 1.46
C3orf35-207ENST00000466204 ABCC8Q09428 1581 aa24.14■■□□□ 1.46
C3orf35-207ENST00000466204 TOPBP1Q92547 1522 aa24.11■■□□□ 1.45
C3orf35-207ENST00000466204 DNMBPQ6XZF7 1577 aa24.09■■□□□ 1.45
C3orf35-207ENST00000466204 WRNQ14191 1432 aaPredicted RBP eCLIP24.09■■□□□ 1.45
C3orf35-207ENST00000466204 CUX1P39880 1505 aa24.07■■□□□ 1.44
C3orf35-207ENST00000466204 CUX2O14529 1486 aa24.05■■□□□ 1.44
C3orf35-207ENST00000466204 SYNJ1O43426 1573 aa23.96■■□□□ 1.43
C3orf35-207ENST00000466204 TOP2BQ02880 1626 aa23.95■■□□□ 1.42
C3orf35-207ENST00000466204 POLA1P09884 1462 aaPredicted RBP23.93■■□□□ 1.42
C3orf35-207ENST00000466204 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
C3orf35-207ENST00000466204 BIVM-ERCC5R4GMW8 1640 aa23.92■■□□□ 1.42
C3orf35-207ENST00000466204 SOGA1O94964 1423 aa23.88■■□□□ 1.41
C3orf35-207ENST00000466204 IFT140Q96RY7 1462 aa23.86■■□□□ 1.41
C3orf35-207ENST00000466204 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
C3orf35-207ENST00000466204 RAD54L2Q9Y4B4 1467 aa23.84■■□□□ 1.41
C3orf35-207ENST00000466204 TRIM41Q8WV44 630 aa23.83■■□□□ 1.41
C3orf35-207ENST00000466204 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
C3orf35-207ENST00000466204 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
C3orf35-207ENST00000466204 ZNF608Q9ULD9 1512 aaPredicted RBP23.72■■□□□ 1.39
C3orf35-207ENST00000466204 TDRD9Q8NDG6 1382 aaKnown RBP23.7■■□□□ 1.38
C3orf35-207ENST00000466204 AQRO60306 1485 aaKnown RBP eCLIP23.65■■□□□ 1.38
C3orf35-207ENST00000466204 WDR97A6NE52 1622 aa23.64■■□□□ 1.37
C3orf35-207ENST00000466204 GAPVD1Q14C86 1478 aa23.57■■□□□ 1.36
C3orf35-207ENST00000466204 EIF4G3O43432 1585 aaKnown RBP23.57■■□□□ 1.36
C3orf35-207ENST00000466204 KIF27Q86VH2 1401 aa23.56■■□□□ 1.36
C3orf35-207ENST00000466204 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
C3orf35-207ENST00000466204 GRIN2BQ13224 1484 aa23.53■■□□□ 1.36
C3orf35-207ENST00000466204 RUSC2Q8N2Y8 1516 aa23.48■■□□□ 1.35
C3orf35-207ENST00000466204 IGF1RP08069 1367 aa23.47■■□□□ 1.35
C3orf35-207ENST00000466204 ERICH3Q5RHP9 1530 aa23.44■■□□□ 1.34
C3orf35-207ENST00000466204 SNAPC4Q5SXM2 1469 aa23.41■■□□□ 1.34
C3orf35-207ENST00000466204 MAGI1Q96QZ7 1491 aaPredicted RBP23.41■■□□□ 1.34
C3orf35-207ENST00000466204 PBRM1Q86U86 1689 aa23.39■■□□□ 1.34
C3orf35-207ENST00000466204 EEA1Q15075 1411 aa23.39■■□□□ 1.33
C3orf35-207ENST00000466204 CSRNP3Q8WYN3 585 aa23.35■■□□□ 1.33
C3orf35-207ENST00000466204 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
C3orf35-207ENST00000466204 CARMIL1Q5VZK9 1371 aa23.31■■□□□ 1.32
C3orf35-207ENST00000466204 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
C3orf35-207ENST00000466204 FAM9AQ8IZU1 332 aaPredicted RBP23.3■■□□□ 1.32
C3orf35-207ENST00000466204 CHMP7Q8WUX9 453 aaPredicted RBP23.3■■□□□ 1.32
C3orf35-207ENST00000466204 ADAMTS12P58397 1594 aa23.29■■□□□ 1.32
C3orf35-207ENST00000466204 FBLN2P98095 1184 aa23.28■■□□□ 1.32
C3orf35-207ENST00000466204 CUL7Q14999 1698 aa23.25■■□□□ 1.31
C3orf35-207ENST00000466204 PRXQ9BXM0 1461 aa23.24■■□□□ 1.31
C3orf35-207ENST00000466204 GRIN2AQ12879 1464 aa23.21■■□□□ 1.31
C3orf35-207ENST00000466204 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
C3orf35-207ENST00000466204 RAPGEF2Q9Y4G8 1499 aa23.19■■□□□ 1.3
C3orf35-207ENST00000466204 CHD1O14646 1710 aa23.16■■□□□ 1.3
C3orf35-207ENST00000466204 NUP160Q12769 1436 aa23.11■■□□□ 1.29
C3orf35-207ENST00000466204 KIF21BO75037 1637 aa23.06■■□□□ 1.28
C3orf35-207ENST00000466204 CEP170Q5SW79 1584 aa23.05■■□□□ 1.28
C3orf35-207ENST00000466204 CLASP1Q7Z460 1538 aa23■■□□□ 1.27
C3orf35-207ENST00000466204 KIAA0586Q9BVV6 1533 aa23■■□□□ 1.27
C3orf35-207ENST00000466204 GOLGA3Q08378 1498 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms