Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 MDM2-213ENST00000393417 1683 ntTSL 56.86□□□□□ -1.316e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.346e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-228ENST00000542502 1127 ntTSL 1 (best)5.79□□□□□ -1.486e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.71□□□□□ -1.56e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.54□□□□□ -1.526e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-224ENST00000537182 1011 ntTSL 1 (best)5.48□□□□□ -1.536e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-218ENST00000481186 1056 ntTSL 55.04□□□□□ -1.66e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-223ENST00000536089 1181 ntTSL 1 (best)5.04□□□□□ -1.66e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-226ENST00000540352 1315 ntTSL 1 (best)5.03□□□□□ -1.66e-8■■□□□ 12.3
LARP4Q71RC2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.622e-6■■□□□ 12.3
LARP4Q71RC2 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.93□□□□□ -1.626e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.74□□□□□ -1.656e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-234ENST00000546048 363 ntTSL 54.6□□□□□ -1.676e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.38□□□□□ -1.716e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.38□□□□□ -1.716e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.38□□□□□ -1.716e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.89□□□□□ -1.796e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.35□□□□□ -1.876e-8■■□□□ 12.3
LARP4Q71RC2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.31□□□□□ -1.886e-8■■□□□ 12.3
LARP4Q71RC2 COX7A2L-207ENST00000482463 1918 ntTSL 210.98□□□□□ -0.656e-10■■□□□ 12.3
LARP4Q71RC2 COX7A2L-206ENST00000468711 516 ntTSL 38.06□□□□□ -1.126e-10■■□□□ 12.3
LARP4Q71RC2 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.845e-8■■□□□ 12.3
LARP4Q71RC2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.215e-8■■□□□ 12.3
LARP4Q71RC2 TMEM141-202ENST00000465017 839 ntTSL 213.57□□□□□ -0.245e-8■■□□□ 12.3
LARP4Q71RC2 TMEM141-204ENST00000483187 683 ntTSL 213.57□□□□□ -0.245e-8■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-218ENST00000540708 1782 ntTSL 224.31■■□□□ 1.482e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-217ENST00000540382 1677 ntTSL 524.3■■□□□ 1.482e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.292e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.152e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.982e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-216ENST00000539770 1295 ntTSL 1 (best)20.38■□□□□ 0.852e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.852e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-209ENST00000442210 716 ntTSL 319.9■□□□□ 0.782e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-214ENST00000536502 1273 ntTSL 219.39■□□□□ 0.692e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.11■□□□□ 0.652e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-215ENST00000539576 1684 ntTSL 519.05■□□□□ 0.642e-11■■□□□ 12.3
LARP4Q71RC2 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.82■□□□□ 0.62e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-213ENST00000536073 562 ntTSL 217.57■□□□□ 0.42e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-203ENST00000392433 1370 ntTSL 217.53■□□□□ 0.42e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-212ENST00000456762 796 ntAPPRIS ALT2 TSL 215.58■□□□□ 0.082e-11■■□□□ 12.3
LARP4Q71RC2 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.162e-11■■□□□ 12.3
LARP4Q71RC2 RPS7-208ENST00000481006 5429 ntTSL 1 (best)14.9□□□□□ -0.026e-10■■□□□ 12.3
LARP4Q71RC2 RPS7-203ENST00000406376 704 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.766e-10■■□□□ 12.3
LARP4Q71RC2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.253e-49■■□□□ 12.3
LARP4Q71RC2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.88■□□□□ 0.771e-10■■□□□ 12.3
LARP4Q71RC2 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.761e-10■■□□□ 12.3
LARP4Q71RC2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.65■□□□□ 0.741e-10■■□□□ 12.3
LARP4Q71RC2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.271e-10■■□□□ 12.3
LARP4Q71RC2 OTUB1-201ENST00000301453 2493 ntTSL 216.38■□□□□ 0.211e-10■■□□□ 12.3
LARP4Q71RC2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.57□□□□□ -0.081e-10■■□□□ 12.3
LARP4Q71RC2 C2orf82-207ENST00000476690 490 ntTSL 323.11■■□□□ 1.296e-11■■□□□ 12.3
LARP4Q71RC2 C2orf82-205ENST00000449331 466 ntTSL 320.97■□□□□ 0.956e-11■■□□□ 12.3
LARP4Q71RC2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.96e-11■■□□□ 12.3
LARP4Q71RC2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.53■□□□□ 0.566e-11■■□□□ 12.3
LARP4Q71RC2 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.246e-11■■□□□ 12.3
LARP4Q71RC2 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.6■□□□□ 0.735e-9■■□□□ 12.3
LARP4Q71RC2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.445e-9■■□□□ 12.3
LARP4Q71RC2 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.015e-9■■□□□ 12.3
LARP4Q71RC2 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.323e-8■■□□□ 12.3
LARP4Q71RC2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.96■□□□□ 0.33e-8■■□□□ 12.3
LARP4Q71RC2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.253e-8■■□□□ 12.3
LARP4Q71RC2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.193e-8■■□□□ 12.3
LARP4Q71RC2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.85■□□□□ 0.133e-8■■□□□ 12.3
LARP4Q71RC2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.13e-8■■□□□ 12.3
LARP4Q71RC2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.43■□□□□ 0.063e-8■■□□□ 12.3
LARP4Q71RC2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.05■□□□□ 03e-8■■□□□ 12.3
LARP4Q71RC2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.053e-8■■□□□ 12.3
LARP4Q71RC2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.72□□□□□ -0.053e-8■■□□□ 12.3
LARP4Q71RC2 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.143e-8■■□□□ 12.3
LARP4Q71RC2 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC13.15□□□□□ -0.33e-8■■□□□ 12.3
LARP4Q71RC2 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.343e-8■■□□□ 12.3
LARP4Q71RC2 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.443e-8■■□□□ 12.3
LARP4Q71RC2 LDLR-208ENST00000558518 3617 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.63e-8■■□□□ 12.3
LARP4Q71RC2 LDLR-214ENST00000560628 535 ntTSL 39.31□□□□□ -0.923e-8■■□□□ 12.3
LARP4Q71RC2 FARSA-203ENST00000586146 1707 ntTSL 520.73■□□□□ 0.913e-6■■□□□ 12.3
LARP4Q71RC2 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.893e-6■■□□□ 12.3
LARP4Q71RC2 FARSA-208ENST00000588965 1831 ntTSL 519.16■□□□□ 0.663e-6■■□□□ 12.3
LARP4Q71RC2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.92■□□□□ 0.623e-6■■□□□ 12.3
LARP4Q71RC2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.23■□□□□ 0.513e-6■■□□□ 12.3
LARP4Q71RC2 FARSA-205ENST00000587488 514 ntTSL 312.82□□□□□ -0.363e-6■■□□□ 12.3
LARP4Q71RC2 SLC25A39-217ENST00000593166 797 ntTSL 314.64□□□□□ -0.071e-6■■□□□ 12.3
LARP4Q71RC2 C2orf82-206ENST00000467665 2782 ntTSL 1 (best)19.28■□□□□ 0.685e-8■■□□□ 12.3
LARP4Q71RC2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.314e-7■■□□□ 12.3
LARP4Q71RC2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.37■□□□□ 0.377e-6■■□□□ 12.3
LARP4Q71RC2 SLC25A11-205ENST00000576951 893 ntTSL 511.72□□□□□ -0.537e-6■■□□□ 12.3
LARP4Q71RC2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.65■■□□□ 1.061e-7■■□□□ 12.3
LARP4Q71RC2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.791e-7■■□□□ 12.3
LARP4Q71RC2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.421e-7■■□□□ 12.3
LARP4Q71RC2 MOGS-206ENST00000462189 2400 ntTSL 213.54□□□□□ -0.241e-7■■□□□ 12.3
LARP4Q71RC2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.492e-9■■□□□ 12.3
LARP4Q71RC2 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.51■□□□□ 0.073e-13■■□□□ 12.3
LARP4Q71RC2 PCYOX1-204ENST00000433351 5345 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.613e-13■■□□□ 12.3
LARP4Q71RC2 HLA-B-254ENST00000497377 917 nt10.55□□□□□ -0.721e-9■■□□□ 12.3
LARP4Q71RC2 HLA-B-253ENST00000481849 753 nt8.15□□□□□ -1.11e-9■■□□□ 12.3
LARP4Q71RC2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.793e-9■■□□□ 12.3
LARP4Q71RC2 EFNA1-201ENST00000368406 1444 ntTSL 1 (best) BASIC11.92□□□□□ -0.53e-9■■□□□ 12.3
LARP4Q71RC2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.31■□□□□ 0.841e-8■■□□□ 12.3
LARP4Q71RC2 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.731e-8■■□□□ 12.3
LARP4Q71RC2 PPIG-206ENST00000433207 1485 ntTSL 1 (best)6.61□□□□□ -1.351e-13■■□□□ 12.2
LARP4Q71RC2 PPIG-210ENST00000482772 982 ntTSL 55.42□□□□□ -1.541e-13■■□□□ 12.2
Retrieved 100 of 15,922 protein–RNA pairs in 121.9 ms