RNA–Protein interactions for RNA: ENST00000372420.5

PLTP-202, Transcript of phospholipid transfer protein, humanhuman

TSL 2 BASIC

Gene PLTP, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLTP-202ENST00000372420 NISCHQ9Y2I1 1504 aa40.13■■■■■ 4.01
PLTP-202ENST00000372420 CCDC180Q9P1Z9 1646 aa35.1■■■■□ 3.21
PLTP-202ENST00000372420 ZCCHC6Q5VYS8 1495 aaKnown RBP33.67■■■□□ 2.98
PLTP-202ENST00000372420 ABCC9O60706 1549 aa33.38■■■□□ 2.93
PLTP-202ENST00000372420 DCAF8L2P0C7V8 631 aa33.21■■■□□ 2.91
PLTP-202ENST00000372420 DCAF1Q9Y4B6 1507 aa33.16■■■□□ 2.9
PLTP-202ENST00000372420 MYO15BQ96JP2 1530 aa32.83■■■□□ 2.85
PLTP-202ENST00000372420 NACADO15069 1562 aa32.72■■■□□ 2.83
PLTP-202ENST00000372420 SHROOM4Q9ULL8 1493 aa32.63■■■□□ 2.81
PLTP-202ENST00000372420 RB1CC1Q8TDY2 1594 aa32.5■■■□□ 2.79
PLTP-202ENST00000372420 SCRIBQ14160 1630 aa32.28■■■□□ 2.76
PLTP-202ENST00000372420 UNC13AQ9UPW8 1703 aa31.9■■■□□ 2.7
PLTP-202ENST00000372420 BICRAQ9NZM4 1560 aa31.55■■■□□ 2.64
PLTP-202ENST00000372420 PABPN1Q86U42 306 aaKnown RBP eCLIP31.44■■■□□ 2.62
PLTP-202ENST00000372420 SUPT5HO00267 1087 aaKnown RBP31.26■■■□□ 2.59
PLTP-202ENST00000372420 CECR2Q9BXF3 1484 aa31.22■■■□□ 2.59
PLTP-202ENST00000372420 RSF1Q96T23 1441 aaPredicted RBP31.05■■■□□ 2.56
PLTP-202ENST00000372420 MROH2BQ7Z745 1585 aa31.01■■■□□ 2.56
PLTP-202ENST00000372420 BAZ1AQ9NRL2 1556 aaPredicted RBP31■■■□□ 2.55
PLTP-202ENST00000372420 SMARCA4P51532 1647 aa30.91■■■□□ 2.54
PLTP-202ENST00000372420 WIZO95785 1651 aa30.78■■■□□ 2.52
PLTP-202ENST00000372420 EIF4G1Q04637 1599 aaKnown RBP30.6■■■□□ 2.49
PLTP-202ENST00000372420 PEG3Q9GZU2 1588 aa30.51■■■□□ 2.47
PLTP-202ENST00000372420 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
PLTP-202ENST00000372420 TOP2AP11388 1531 aaKnown RBP30.42■■■□□ 2.46
PLTP-202ENST00000372420 SMARCA2P51531 1590 aa30.4■■■□□ 2.46
PLTP-202ENST00000372420 BAZ1BQ9UIG0 1483 aaKnown RBP30.25■■■□□ 2.43
PLTP-202ENST00000372420 CC2D2AQ9P2K1 1620 aa30.21■■■□□ 2.43
PLTP-202ENST00000372420 NCAPD3P42695 1498 aa30.19■■■□□ 2.42
PLTP-202ENST00000372420 HMGXB3Q12766 1538 aa30.15■■■□□ 2.42
PLTP-202ENST00000372420 CCDC88BA6NC98 1476 aa30.11■■■□□ 2.41
PLTP-202ENST00000372420 CHIC1Q5VXU3 224 aa29.82■■■□□ 2.36
PLTP-202ENST00000372420 DNAJC5BQ9UF47 199 aa29.62■■■□□ 2.33
PLTP-202ENST00000372420 CFTRP13569 1480 aa29.46■■■□□ 2.31
PLTP-202ENST00000372420 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
PLTP-202ENST00000372420 CADPSQ9ULU8 1353 aa29.41■■■□□ 2.3
PLTP-202ENST00000372420 TRIM41Q8WV44 630 aa29.4■■■□□ 2.3
PLTP-202ENST00000372420 PRDM2Q13029 1718 aa29.37■■■□□ 2.29
PLTP-202ENST00000372420 NESP48681 1621 aa29.26■■■□□ 2.27
PLTP-202ENST00000372420 WRNQ14191 1432 aaPredicted RBP eCLIP29.23■■■□□ 2.27
PLTP-202ENST00000372420 LAMC3Q9Y6N6 1575 aa29.21■■■□□ 2.27
PLTP-202ENST00000372420 SYNJ1O43426 1573 aa29.16■■■□□ 2.26
PLTP-202ENST00000372420 FANCD2Q9BXW9 1451 aa29.1■■■□□ 2.25
PLTP-202ENST00000372420 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
PLTP-202ENST00000372420 CUX1P39880 1505 aa29.02■■■□□ 2.24
PLTP-202ENST00000372420 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
PLTP-202ENST00000372420 PDS5BQ9NTI5 1447 aa28.97■■■□□ 2.23
PLTP-202ENST00000372420 CEP164Q9UPV0 1460 aa28.94■■■□□ 2.22
PLTP-202ENST00000372420 KIF21AQ7Z4S6 1674 aa28.92■■■□□ 2.22
PLTP-202ENST00000372420 FAM9AQ8IZU1 332 aaPredicted RBP28.89■■■□□ 2.21
PLTP-202ENST00000372420 SOGA1O94964 1423 aa28.82■■■□□ 2.2
PLTP-202ENST00000372420 DNMBPQ6XZF7 1577 aa28.81■■■□□ 2.2
PLTP-202ENST00000372420 TOPBP1Q92547 1522 aa28.77■■■□□ 2.2
PLTP-202ENST00000372420 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.2
PLTP-202ENST00000372420 RUSC2Q8N2Y8 1516 aa28.74■■■□□ 2.19
PLTP-202ENST00000372420 FGD5Q6ZNL6 1462 aa28.73■■■□□ 2.19
PLTP-202ENST00000372420 LOC105371045A0A1W2PR82 267 aa28.69■■■□□ 2.18
PLTP-202ENST00000372420 EEA1Q15075 1411 aa28.68■■■□□ 2.18
PLTP-202ENST00000372420 MRC2Q9UBG0 1479 aa28.64■■■□□ 2.18
PLTP-202ENST00000372420 ERCC6Q03468 1493 aa28.63■■■□□ 2.17
PLTP-202ENST00000372420 POLA1P09884 1462 aaPredicted RBP28.6■■■□□ 2.17
PLTP-202ENST00000372420 CSRNP3Q8WYN3 585 aa28.56■■■□□ 2.16
PLTP-202ENST00000372420 RAD54L2Q9Y4B4 1467 aa28.53■■■□□ 2.16
PLTP-202ENST00000372420 EHMT2Q96KQ7 1210 aa28.51■■■□□ 2.15
PLTP-202ENST00000372420 CUX2O14529 1486 aa28.5■■■□□ 2.15
PLTP-202ENST00000372420 KIF27Q86VH2 1401 aa28.5■■■□□ 2.15
PLTP-202ENST00000372420 WDR62O43379 1518 aa28.5■■■□□ 2.15
PLTP-202ENST00000372420 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
PLTP-202ENST00000372420 ABCA10Q8WWZ4 1543 aa28.45■■■□□ 2.14
PLTP-202ENST00000372420 WDR97A6NE52 1622 aa28.42■■■□□ 2.14
PLTP-202ENST00000372420 KIF21BO75037 1637 aa28.37■■■□□ 2.13
PLTP-202ENST00000372420 TARBP1Q13395 1621 aaKnown RBP28.37■■■□□ 2.13
PLTP-202ENST00000372420 GOLGA3Q08378 1498 aa28.31■■■□□ 2.12
PLTP-202ENST00000372420 IGF1RP08069 1367 aa28.27■■■□□ 2.12
PLTP-202ENST00000372420 PRXQ9BXM0 1461 aa28.26■■■□□ 2.12
PLTP-202ENST00000372420 ABCA5Q8WWZ7 1642 aa28.26■■■□□ 2.11
PLTP-202ENST00000372420 TDRD9Q8NDG6 1382 aaKnown RBP28.25■■■□□ 2.11
PLTP-202ENST00000372420 IFT140Q96RY7 1462 aa28.25■■■□□ 2.11
PLTP-202ENST00000372420 RAPGEF2Q9Y4G8 1499 aa28.24■■■□□ 2.11
PLTP-202ENST00000372420 GAPVD1Q14C86 1478 aa28.19■■■□□ 2.1
PLTP-202ENST00000372420 ERICH3Q5RHP9 1530 aa28.19■■■□□ 2.1
PLTP-202ENST00000372420 UBTFP17480 764 aaKnown RBP28.18■■■□□ 2.1
PLTP-202ENST00000372420 TNIKQ9UKE5 1360 aa28.17■■■□□ 2.1
PLTP-202ENST00000372420 CARMIL1Q5VZK9 1371 aa28.13■■■□□ 2.09
PLTP-202ENST00000372420 ZNF608Q9ULD9 1512 aaPredicted RBP28.13■■■□□ 2.09
PLTP-202ENST00000372420 AQRO60306 1485 aaKnown RBP eCLIP28.11■■■□□ 2.09
PLTP-202ENST00000372420 CUL7Q14999 1698 aa28.1■■■□□ 2.09
PLTP-202ENST00000372420 PBRM1Q86U86 1689 aa28.1■■■□□ 2.09
PLTP-202ENST00000372420 EIF4G3O43432 1585 aaKnown RBP28.03■■■□□ 2.08
PLTP-202ENST00000372420 CEP162Q5TB80 1403 aa28.01■■■□□ 2.08
PLTP-202ENST00000372420 GRIN2BQ13224 1484 aa28■■■□□ 2.07
PLTP-202ENST00000372420 ADAMTS12P58397 1594 aa27.91■■■□□ 2.06
PLTP-202ENST00000372420 FHAD1B1AJZ9 1412 aa27.87■■■□□ 2.05
PLTP-202ENST00000372420 SNAPC4Q5SXM2 1469 aa27.86■■■□□ 2.05
PLTP-202ENST00000372420 CLIP1P30622 1438 aa27.84■■■□□ 2.05
PLTP-202ENST00000372420 RANGAP1P46060 587 aaPredicted RBP27.82■■■□□ 2.04
PLTP-202ENST00000372420 CTTNBP2Q8WZ74 1663 aa27.79■■■□□ 2.04
PLTP-202ENST00000372420 MAGI1Q96QZ7 1491 aaPredicted RBP27.78■■■□□ 2.04
PLTP-202ENST00000372420 SYNJ2O15056 1496 aa27.68■■■□□ 2.02
PLTP-202ENST00000372420 GRIN2AQ12879 1464 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 297.2 ms