RNA–Protein interactions for RNA: ENST00000546048.5

MDM2-234, Transcript of MDM2 proto-oncogene, human

TSL 5

Gene MDM2, Length 363 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDM2-234	ENST00000546048	AEBP2	Q6ZN18	517 aa	Predicted RBP	17.47	■□□□□ 0.39
MDM2-234	ENST00000546048	CHIC1	Q5VXU3	224 aa		16.74	■□□□□ 0.27
MDM2-234	ENST00000546048	SENP3	Q9H4L4	574 aa	Predicted RBP	14.81	□□□□□ -0.04
MDM2-234	ENST00000546048	PHF23	Q9BUL5	403 aa	Predicted RBP	14.72	□□□□□ -0.05
MDM2-234	ENST00000546048	FOXD1	Q16676	465 aa		13.81	□□□□□ -0.2
MDM2-234	ENST00000546048	PLPPR3	Q6T4P5	718 aa		13.44	□□□□□ -0.26
MDM2-234	ENST00000546048	PPP6R1	Q9UPN7	881 aa		13.07	□□□□□ -0.32
MDM2-234	ENST00000546048	ADRA2B	P18089	450 aa		13.05	□□□□□ -0.32
MDM2-234	ENST00000546048	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.96	□□□□□ -0.33
MDM2-234	ENST00000546048	MSH5	O43196	834 aa		12.81	□□□□□ -0.36
MDM2-234	ENST00000546048	NISCH	Q9Y2I1	1504 aa		12.43	□□□□□ -0.42
MDM2-234	ENST00000546048	POTED	Q86YR6	584 aa		12.22	□□□□□ -0.45
MDM2-234	ENST00000546048	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.93	□□□□□ -0.5
MDM2-234	ENST00000546048	SCAF1	Q9H7N4	1312 aa	Known RBP	11.86	□□□□□ -0.51
MDM2-234	ENST00000546048	PPP4R3CP	Q6ZMV5	832 aa		11.82	□□□□□ -0.52
MDM2-234	ENST00000546048	DMRT2	Q9Y5R5	561 aa		11.8	□□□□□ -0.52
MDM2-234	ENST00000546048	CNKSR2	Q8WXI2	1034 aa		11.53	□□□□□ -0.56
MDM2-234	ENST00000546048	HOXD11	P31277	338 aa	Predicted RBP	11.43	□□□□□ -0.58
MDM2-234	ENST00000546048	RNF216	Q9NWF9	866 aa	Predicted RBP	11.39	□□□□□ -0.59
MDM2-234	ENST00000546048	NCBP3	Q53F19	620 aa	Known RBP	11.38	□□□□□ -0.59
MDM2-234	ENST00000546048	DCAF8L1	A6NGE4	600 aa		11.3	□□□□□ -0.6
MDM2-234	ENST00000546048	NPM3	O75607	178 aa	Known RBP	11.28	□□□□□ -0.6
MDM2-234	ENST00000546048	KCNA4	P22459	653 aa		11.25	□□□□□ -0.61
MDM2-234	ENST00000546048	RNF39	Q9H2S5	420 aa		10.98	□□□□□ -0.65
MDM2-234	ENST00000546048	DNAJC5B	Q9UF47	199 aa		10.95	□□□□□ -0.66
MDM2-234	ENST00000546048	ABCC9	O60706	1549 aa		10.94	□□□□□ -0.66
MDM2-234	ENST00000546048	CCDC180	Q9P1Z9	1646 aa		10.92	□□□□□ -0.66
MDM2-234	ENST00000546048	CACNB1	Q02641	598 aa	Predicted RBP	10.88	□□□□□ -0.67
MDM2-234	ENST00000546048	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	10.88	□□□□□ -0.67	1e-8	■■□□□ 11.6
MDM2-234	ENST00000546048	C1QBP	Q07021	282 aa	Known RBP	10.79	□□□□□ -0.68
MDM2-234	ENST00000546048	SLC4A2	P04920	1241 aa		10.73	□□□□□ -0.69
MDM2-234	ENST00000546048		U3KPZ7	1027 aa	Predicted RBP	10.72	□□□□□ -0.69
MDM2-234	ENST00000546048	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.64	□□□□□ -0.71
MDM2-234	ENST00000546048	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.51	□□□□□ -0.73
MDM2-234	ENST00000546048	DCAF8L2	P0C7V8	631 aa		10.48	□□□□□ -0.73
MDM2-234	ENST00000546048	CAPN15	O75808	1086 aa		10.45	□□□□□ -0.74
MDM2-234	ENST00000546048	FOXD4L1	Q9NU39	408 aa		10.42	□□□□□ -0.74
MDM2-234	ENST00000546048	MYCN	P04198	464 aa	Predicted RBP	10.41	□□□□□ -0.74
MDM2-234	ENST00000546048	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.4	□□□□□ -0.74
MDM2-234	ENST00000546048	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.4	□□□□□ -0.74
MDM2-234	ENST00000546048	ZBTB22	O15209	634 aa		10.39	□□□□□ -0.75
MDM2-234	ENST00000546048	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.37	□□□□□ -0.75
MDM2-234	ENST00000546048	RB1CC1	Q8TDY2	1594 aa		10.35	□□□□□ -0.75
MDM2-234	ENST00000546048	DSG3	P32926	999 aa		10.35	□□□□□ -0.75
MDM2-234	ENST00000546048	APLP2	Q06481	763 aa		10.35	□□□□□ -0.75
MDM2-234	ENST00000546048	NACAD	O15069	1562 aa		10.35	□□□□□ -0.75
MDM2-234	ENST00000546048	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.34	□□□□□ -0.75
MDM2-234	ENST00000546048	TRH	P20396	242 aa	Predicted RBP	10.33	□□□□□ -0.76
MDM2-234	ENST00000546048	PABPN1	Q86U42	306 aa	Known RBP eCLIP	10.3	□□□□□ -0.76
MDM2-234	ENST00000546048	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.3	□□□□□ -0.76
MDM2-234	ENST00000546048	MYO15B	Q96JP2	1530 aa		10.27	□□□□□ -0.77
MDM2-234	ENST00000546048	ABCB7	O75027	752 aa		10.26	□□□□□ -0.77
MDM2-234	ENST00000546048	DCAF1	Q9Y4B6	1507 aa		10.22	□□□□□ -0.77
MDM2-234	ENST00000546048	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.2	□□□□□ -0.78
MDM2-234	ENST00000546048	BICRA	Q9NZM4	1560 aa		10.17	□□□□□ -0.78
MDM2-234	ENST00000546048	UNC13A	Q9UPW8	1703 aa		10.12	□□□□□ -0.79
MDM2-234	ENST00000546048	SCRIB	Q14160	1630 aa		10.09	□□□□□ -0.79
MDM2-234	ENST00000546048	POLA2	Q14181	598 aa		10.09	□□□□□ -0.79
MDM2-234	ENST00000546048	ATXN8OS	P0DMR3	200 aa		10.04	□□□□□ -0.8
MDM2-234	ENST00000546048	EHMT2	Q96KQ7	1210 aa		10.04	□□□□□ -0.8
MDM2-234	ENST00000546048	CSRNP3	Q8WYN3	585 aa		10.03	□□□□□ -0.8
MDM2-234	ENST00000546048	SHROOM4	Q9ULL8	1493 aa		9.9	□□□□□ -0.83
MDM2-234	ENST00000546048	ZBTB12	Q9Y330	459 aa	Predicted RBP	9.87	□□□□□ -0.83
MDM2-234	ENST00000546048	EIF4G1	Q04637	1599 aa	Known RBP	9.85	□□□□□ -0.83
MDM2-234	ENST00000546048	CC2D2A	Q9P2K1	1620 aa		9.83	□□□□□ -0.84
MDM2-234	ENST00000546048	RBM42	Q9BTD8	480 aa	Known RBP	9.83	□□□□□ -0.84
MDM2-234	ENST00000546048	OSCAR	Q8IYS5	282 aa		9.81	□□□□□ -0.84
MDM2-234	ENST00000546048	CECR2	Q9BXF3	1484 aa		9.8	□□□□□ -0.84
MDM2-234	ENST00000546048	MKRN4P	Q13434	485 aa	Predicted RBP	9.74	□□□□□ -0.85
MDM2-234	ENST00000546048	FBLN2	P98095	1184 aa		9.72	□□□□□ -0.85
MDM2-234	ENST00000546048	AKT1S1	Q96B36	256 aa		9.65	□□□□□ -0.86
MDM2-234	ENST00000546048	ATAD2B	Q9ULI0	1458 aa		9.65	□□□□□ -0.87
MDM2-234	ENST00000546048	NCAPD3	P42695	1498 aa		9.63	□□□□□ -0.87
MDM2-234	ENST00000546048	MROH2B	Q7Z745	1585 aa		9.63	□□□□□ -0.87
MDM2-234	ENST00000546048	SMARCA4	P51532	1647 aa		9.61	□□□□□ -0.87
MDM2-234	ENST00000546048	POTEH	Q6S545	545 aa		9.6	□□□□□ -0.87
MDM2-234	ENST00000546048	SPDYE2B	A6NHP3	402 aa		9.59	□□□□□ -0.87
MDM2-234	ENST00000546048	SPDYE6	P0CI01	402 aa		9.59	□□□□□ -0.87
MDM2-234	ENST00000546048	SPDYE2	Q495Y8	402 aa		9.59	□□□□□ -0.87
MDM2-234	ENST00000546048	REM2	Q8IYK8	340 aa	Predicted RBP	9.58	□□□□□ -0.88
MDM2-234	ENST00000546048	CHRDL2	Q6WN34	429 aa		9.57	□□□□□ -0.88
MDM2-234	ENST00000546048	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	9.57	□□□□□ -0.88
MDM2-234	ENST00000546048	SMARCA2	P51531	1590 aa		9.53	□□□□□ -0.88
MDM2-234	ENST00000546048	SSUH2	Q9Y2M2	353 aa		9.52	□□□□□ -0.89
MDM2-234	ENST00000546048	PEG3	Q9GZU2	1588 aa		9.51	□□□□□ -0.89
MDM2-234	ENST00000546048	RSF1	Q96T23	1441 aa	Predicted RBP	9.51	□□□□□ -0.89
MDM2-234	ENST00000546048	PITPNM1	O00562	1244 aa		9.51	□□□□□ -0.89
MDM2-234	ENST00000546048	ZNF692	Q9BU19	519 aa	Predicted RBP	9.51	□□□□□ -0.89
MDM2-234	ENST00000546048	BAZ1B	Q9UIG0	1483 aa	Known RBP	9.5	□□□□□ -0.89
MDM2-234	ENST00000546048	HMGXB3	Q12766	1538 aa		9.5	□□□□□ -0.89
MDM2-234	ENST00000546048	NES	P48681	1621 aa		9.48	□□□□□ -0.89
MDM2-234	ENST00000546048	WIZ	O95785	1651 aa		9.47	□□□□□ -0.89
MDM2-234	ENST00000546048	PIP4P2	Q8N4L2	257 aa		9.4	□□□□□ -0.9
MDM2-234	ENST00000546048	SPDYE1	Q8NFV5	336 aa	Predicted RBP	9.38	□□□□□ -0.91
MDM2-234	ENST00000546048	CLEC11A	Q9Y240	323 aa		9.37	□□□□□ -0.91
MDM2-234	ENST00000546048	CADPS	Q9ULU8	1353 aa		9.36	□□□□□ -0.91
MDM2-234	ENST00000546048	ERCC6	Q03468	1493 aa		9.35	□□□□□ -0.91
MDM2-234	ENST00000546048	FXR2	P51116	673 aa	Known RBP eCLIP	9.35	□□□□□ -0.91
MDM2-234	ENST00000546048	SPDYE4	A6NLX3	237 aa		9.34	□□□□□ -0.91
MDM2-234	ENST00000546048	TOP2A	P11388	1531 aa	Known RBP	9.33	□□□□□ -0.92

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