RNA–Protein interactions for RNA: ENST00000545204.1

MDM2-233, Transcript of MDM2 proto-oncogene, human

TSL 5 BASIC

Gene MDM2, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MDM2-233	ENST00000545204	AEBP2	Q6ZN18	517 aa	Predicted RBP	17.64	■□□□□ 0.41
MDM2-233	ENST00000545204	CHIC1	Q5VXU3	224 aa		17.17	■□□□□ 0.34
MDM2-233	ENST00000545204	PHF23	Q9BUL5	403 aa	Predicted RBP	15.09	■□□□□ 0.01
MDM2-233	ENST00000545204	SENP3	Q9H4L4	574 aa	Predicted RBP	14.97	□□□□□ -0.01
MDM2-233	ENST00000545204	PLPPR3	Q6T4P5	718 aa		13.91	□□□□□ -0.18
MDM2-233	ENST00000545204	FOXD1	Q16676	465 aa		13.9	□□□□□ -0.18
MDM2-233	ENST00000545204	PPP6R1	Q9UPN7	881 aa		13.34	□□□□□ -0.27
MDM2-233	ENST00000545204	ADRA2B	P18089	450 aa		13.31	□□□□□ -0.28
MDM2-233	ENST00000545204	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.08	□□□□□ -0.32
MDM2-233	ENST00000545204	MSH5	O43196	834 aa		12.83	□□□□□ -0.36
MDM2-233	ENST00000545204	POTED	Q86YR6	584 aa		12.61	□□□□□ -0.39
MDM2-233	ENST00000545204	PPP4R3CP	Q6ZMV5	832 aa		12.25	□□□□□ -0.45
MDM2-233	ENST00000545204	SCAF1	Q9H7N4	1312 aa	Known RBP	12.16	□□□□□ -0.46
MDM2-233	ENST00000545204	MAPK8IP2	Q13387	824 aa	Predicted RBP	12.09	□□□□□ -0.47
MDM2-233	ENST00000545204	DMRT2	Q9Y5R5	561 aa		11.95	□□□□□ -0.5
MDM2-233	ENST00000545204	CNKSR2	Q8WXI2	1034 aa		11.92	□□□□□ -0.5
MDM2-233	ENST00000545204	KCNA4	P22459	653 aa		11.91	□□□□□ -0.5
MDM2-233	ENST00000545204	NCBP3	Q53F19	620 aa	Known RBP	11.9	□□□□□ -0.5
MDM2-233	ENST00000545204	NPM3	O75607	178 aa	Known RBP	11.75	□□□□□ -0.53
MDM2-233	ENST00000545204	RNF216	Q9NWF9	866 aa	Predicted RBP	11.71	□□□□□ -0.53
MDM2-233	ENST00000545204	HOXD11	P31277	338 aa	Predicted RBP	11.68	□□□□□ -0.54
MDM2-233	ENST00000545204	DNAJC5B	Q9UF47	199 aa		11.45	□□□□□ -0.58
MDM2-233	ENST00000545204	DCAF8L1	A6NGE4	600 aa		11.4	□□□□□ -0.58
MDM2-233	ENST00000545204	SLC4A1AP	Q9BWU0	796 aa	Known RBP	11.32	□□□□□ -0.6
MDM2-233	ENST00000545204	SLC4A2	P04920	1241 aa		11.11	□□□□□ -0.63
MDM2-233	ENST00000545204	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	11.1	□□□□□ -0.63	1e-8	■■□□□ 11.6
MDM2-233	ENST00000545204	CACNB1	Q02641	598 aa	Predicted RBP	11.01	□□□□□ -0.65
MDM2-233	ENST00000545204	RNF39	Q9H2S5	420 aa		11	□□□□□ -0.65
MDM2-233	ENST00000545204	FOXD4L1	Q9NU39	408 aa		10.98	□□□□□ -0.65
MDM2-233	ENST00000545204	ZBTB22	O15209	634 aa		10.97	□□□□□ -0.65
MDM2-233	ENST00000545204	EHMT2	Q96KQ7	1210 aa		10.94	□□□□□ -0.66
MDM2-233	ENST00000545204		U3KPZ7	1027 aa	Predicted RBP	10.94	□□□□□ -0.66
MDM2-233	ENST00000545204	C1QBP	Q07021	282 aa	Known RBP	10.86	□□□□□ -0.67
MDM2-233	ENST00000545204	MYCN	P04198	464 aa	Predicted RBP	10.85	□□□□□ -0.67
MDM2-233	ENST00000545204	CSRNP3	Q8WYN3	585 aa		10.85	□□□□□ -0.67
MDM2-233	ENST00000545204	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.77	□□□□□ -0.69
MDM2-233	ENST00000545204	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.77	□□□□□ -0.69
MDM2-233	ENST00000545204	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.74	□□□□□ -0.69
MDM2-233	ENST00000545204	APLP2	Q06481	763 aa		10.67	□□□□□ -0.7
MDM2-233	ENST00000545204	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.65	□□□□□ -0.7
MDM2-233	ENST00000545204	ATXN8OS	P0DMR3	200 aa		10.6	□□□□□ -0.71
MDM2-233	ENST00000545204	CAPN15	O75808	1086 aa		10.59	□□□□□ -0.71
MDM2-233	ENST00000545204	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.57	□□□□□ -0.72
MDM2-233	ENST00000545204	ZNF219	Q9P2Y4	722 aa	Predicted RBP	10.54	□□□□□ -0.72
MDM2-233	ENST00000545204	TRH	P20396	242 aa	Predicted RBP	10.52	□□□□□ -0.73
MDM2-233	ENST00000545204	DSG3	P32926	999 aa		10.44	□□□□□ -0.74
MDM2-233	ENST00000545204	ABCB7	O75027	752 aa		10.39	□□□□□ -0.75
MDM2-233	ENST00000545204	POLA2	Q14181	598 aa		10.35	□□□□□ -0.75
MDM2-233	ENST00000545204	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.19	□□□□□ -0.78
MDM2-233	ENST00000545204	FBLN2	P98095	1184 aa		10.11	□□□□□ -0.79
MDM2-233	ENST00000545204	MKRN4P	Q13434	485 aa	Predicted RBP	10.11	□□□□□ -0.79
MDM2-233	ENST00000545204	OSCAR	Q8IYS5	282 aa		10.02	□□□□□ -0.81
MDM2-233	ENST00000545204	RBM42	Q9BTD8	480 aa	Known RBP	9.95	□□□□□ -0.82
MDM2-233	ENST00000545204	SPDYE2B	A6NHP3	402 aa		9.91	□□□□□ -0.82
MDM2-233	ENST00000545204	SPDYE6	P0CI01	402 aa		9.91	□□□□□ -0.82
MDM2-233	ENST00000545204	SPDYE2	Q495Y8	402 aa		9.91	□□□□□ -0.82
MDM2-233	ENST00000545204	POTEH	Q6S545	545 aa		9.88	□□□□□ -0.83
MDM2-233	ENST00000545204	SPDYE4	A6NLX3	237 aa		9.85	□□□□□ -0.83
MDM2-233	ENST00000545204	ZNF692	Q9BU19	519 aa	Predicted RBP	9.85	□□□□□ -0.83
MDM2-233	ENST00000545204	SSUH2	Q9Y2M2	353 aa		9.84	□□□□□ -0.83
MDM2-233	ENST00000545204	AKT1S1	Q96B36	256 aa		9.81	□□□□□ -0.84
MDM2-233	ENST00000545204	FKBP8	Q14318	412 aa		9.8	□□□□□ -0.84
MDM2-233	ENST00000545204	REM2	Q8IYK8	340 aa	Predicted RBP	9.73	□□□□□ -0.85
MDM2-233	ENST00000545204	PABPN1	Q86U42	306 aa	Known RBP eCLIP	9.72	□□□□□ -0.85
MDM2-233	ENST00000545204	PROM2	Q8N271	834 aa		9.71	□□□□□ -0.86
MDM2-233	ENST00000545204	PITPNM1	O00562	1244 aa		9.62	□□□□□ -0.87
MDM2-233	ENST00000545204	SPDYE1	Q8NFV5	336 aa	Predicted RBP	9.62	□□□□□ -0.87
MDM2-233	ENST00000545204	CHRDL2	Q6WN34	429 aa		9.56	□□□□□ -0.88
MDM2-233	ENST00000545204	CLEC11A	Q9Y240	323 aa		9.56	□□□□□ -0.88
MDM2-233	ENST00000545204	STAG3	Q9UJ98	1225 aa		9.54	□□□□□ -0.88
MDM2-233	ENST00000545204	PRR29	P0C7W0	189 aa		9.48	□□□□□ -0.89
MDM2-233	ENST00000545204	FBXO3	Q9UK99	471 aa		9.47	□□□□□ -0.89
MDM2-233	ENST00000545204	FXR2	P51116	673 aa	Known RBP eCLIP	9.45	□□□□□ -0.9
MDM2-233	ENST00000545204	PIP4P2	Q8N4L2	257 aa		9.43	□□□□□ -0.9
MDM2-233	ENST00000545204	PRKAR2A	P13861	404 aa	Known RBP	9.36	□□□□□ -0.91
MDM2-233	ENST00000545204	CREBZF	Q9NS37	354 aa		9.36	□□□□□ -0.91
MDM2-233	ENST00000545204	VASP	P50552	380 aa	Predicted RBP	9.35	□□□□□ -0.91
MDM2-233	ENST00000545204	CHADL	Q6NUI6	762 aa		9.35	□□□□□ -0.91
MDM2-233	ENST00000545204	MIER1	Q8N108	512 aa		9.32	□□□□□ -0.92
MDM2-233	ENST00000545204	PLCD3	Q8N3E9	789 aa		9.31	□□□□□ -0.92
MDM2-233	ENST00000545204	PLEKHG5	O94827	1062 aa		9.28	□□□□□ -0.92
MDM2-233	ENST00000545204	MNX1	P50219	401 aa	Predicted RBP	9.27	□□□□□ -0.93
MDM2-233	ENST00000545204	FARP1	Q9Y4F1	1045 aa	Predicted RBP	9.26	□□□□□ -0.93
MDM2-233	ENST00000545204	IFNLR1	Q8IU57	520 aa	Predicted RBP	9.22	□□□□□ -0.93
MDM2-233	ENST00000545204	ZBTB47	Q9UFB7	747 aa	Predicted RBP	9.22	□□□□□ -0.93
MDM2-233	ENST00000545204	SP7	Q8TDD2	431 aa	Predicted RBP	9.2	□□□□□ -0.94
MDM2-233	ENST00000545204	NPM1	P06748	294 aa	Known RBP eCLIP	9.19	□□□□□ -0.94
MDM2-233	ENST00000545204	KLHL34	Q8N239	644 aa		9.17	□□□□□ -0.94
MDM2-233	ENST00000545204	C19orf67	A6NJJ6	358 aa		9.12	□□□□□ -0.95
MDM2-233	ENST00000545204	HAX1	O00165	279 aa		9.12	□□□□□ -0.95
MDM2-233	ENST00000545204	NUBP1	P53384	320 aa		9.12	□□□□□ -0.95
MDM2-233	ENST00000545204	SPOCK2	Q92563	424 aa		9.11	□□□□□ -0.95
MDM2-233	ENST00000545204	CD44	P16070	742 aa	Known RBP	9.09	□□□□□ -0.95
MDM2-233	ENST00000545204	RASEF	Q8IZ41	740 aa		9.09	□□□□□ -0.95
MDM2-233	ENST00000545204	EVX2	Q03828	476 aa		9.06	□□□□□ -0.96
MDM2-233	ENST00000545204	PAK3	O75914	559 aa	Predicted RBP	9.04	□□□□□ -0.96
MDM2-233	ENST00000545204	FAM212A	Q96EL1	285 aa		9.04	□□□□□ -0.96
MDM2-233	ENST00000545204	TSPYL2	Q9H2G4	693 aa	Predicted RBP	9.03	□□□□□ -0.96
MDM2-233	ENST00000545204	ZRANB1	Q9UGI0	708 aa		9.03	□□□□□ -0.96
MDM2-233	ENST00000545204	CCDC61	Q9Y6R9	512 aa		9	□□□□□ -0.97

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