RNA–Protein interactions for RNA: ENST00000588025.5

FARSA-207, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

TSL 5 BASIC

Gene FARSA, Length 2,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-207ENST00000588025 NISCHQ9Y2I1 1504 aa43.76■■■■■ 4.6
FARSA-207ENST00000588025 CCDC180Q9P1Z9 1646 aa38.06■■■■□ 3.68
FARSA-207ENST00000588025 ZCCHC6Q5VYS8 1495 aaKnown RBP36.8■■■■□ 3.48
FARSA-207ENST00000588025 DCAF8L2P0C7V8 631 aa36.16■■■■□ 3.38
FARSA-207ENST00000588025 DCAF1Q9Y4B6 1507 aa36.07■■■■□ 3.37
FARSA-207ENST00000588025 ABCC9O60706 1549 aa36.05■■■■□ 3.36
FARSA-207ENST00000588025 SHROOM4Q9ULL8 1493 aa35.94■■■■□ 3.34
FARSA-207ENST00000588025 MYO15BQ96JP2 1530 aa35.58■■■■□ 3.29
FARSA-207ENST00000588025 NACADO15069 1562 aa35.39■■■■□ 3.26
FARSA-207ENST00000588025 SCRIBQ14160 1630 aa35.18■■■■□ 3.22
FARSA-207ENST00000588025 RB1CC1Q8TDY2 1594 aa35.1■■■■□ 3.21
FARSA-207ENST00000588025 UNC13AQ9UPW8 1703 aa34.57■■■■□ 3.12
FARSA-207ENST00000588025 SUPT5HO00267 1087 aaKnown RBP34.54■■■■□ 3.12
FARSA-207ENST00000588025 BICRAQ9NZM4 1560 aa34.16■■■■□ 3.06
FARSA-207ENST00000588025 CECR2Q9BXF3 1484 aa34.1■■■■□ 3.05
FARSA-207ENST00000588025 PABPN1Q86U42 306 aaKnown RBP eCLIP34.03■■■■□ 3.04
FARSA-207ENST00000588025 RSF1Q96T23 1441 aaPredicted RBP34.01■■■■□ 3.04
FARSA-207ENST00000588025 MROH2BQ7Z745 1585 aa33.89■■■■□ 3.02
FARSA-207ENST00000588025 BAZ1AQ9NRL2 1556 aaPredicted RBP33.74■■■□□ 2.99
FARSA-207ENST00000588025 SMARCA4P51532 1647 aa33.65■■■□□ 2.98
FARSA-207ENST00000588025 WIZO95785 1651 aa33.65■■■□□ 2.98
FARSA-207ENST00000588025 TOP2AP11388 1531 aaKnown RBP33.2■■■□□ 2.91
FARSA-207ENST00000588025 PEG3Q9GZU2 1588 aa33.17■■■□□ 2.9
FARSA-207ENST00000588025 EIF4G1Q04637 1599 aaKnown RBP33.09■■■□□ 2.89
FARSA-207ENST00000588025 CHIC1Q5VXU3 224 aa33.07■■■□□ 2.88
FARSA-207ENST00000588025 ATAD2BQ9ULI0 1458 aa33.05■■■□□ 2.88
FARSA-207ENST00000588025 SMARCA2P51531 1590 aa32.96■■■□□ 2.87
FARSA-207ENST00000588025 CCDC88BA6NC98 1476 aa32.89■■■□□ 2.86
FARSA-207ENST00000588025 BAZ1BQ9UIG0 1483 aaKnown RBP32.86■■■□□ 2.85
FARSA-207ENST00000588025 NCAPD3P42695 1498 aa32.68■■■□□ 2.82
FARSA-207ENST00000588025 HMGXB3Q12766 1538 aa32.67■■■□□ 2.82
FARSA-207ENST00000588025 CC2D2AQ9P2K1 1620 aa32.6■■■□□ 2.81
FARSA-207ENST00000588025 TRIM41Q8WV44 630 aa32.37■■■□□ 2.77
FARSA-207ENST00000588025 ABCC8Q09428 1581 aa32.34■■■□□ 2.77
FARSA-207ENST00000588025 CFTRP13569 1480 aa32.02■■■□□ 2.72
FARSA-207ENST00000588025 WRNQ14191 1432 aaPredicted RBP eCLIP31.99■■■□□ 2.71
FARSA-207ENST00000588025 SYNJ1O43426 1573 aa31.95■■■□□ 2.71
FARSA-207ENST00000588025 FAM9AQ8IZU1 332 aaPredicted RBP31.92■■■□□ 2.7
FARSA-207ENST00000588025 DNAJC5BQ9UF47 199 aa31.9■■■□□ 2.7
FARSA-207ENST00000588025 PRDM2Q13029 1718 aa31.89■■■□□ 2.7
FARSA-207ENST00000588025 LOC105371045A0A1W2PR82 267 aa31.89■■■□□ 2.7
FARSA-207ENST00000588025 CADPSQ9ULU8 1353 aa31.87■■■□□ 2.69
FARSA-207ENST00000588025 NESP48681 1621 aa31.72■■■□□ 2.67
FARSA-207ENST00000588025 TOP2BQ02880 1626 aa31.72■■■□□ 2.67
FARSA-207ENST00000588025 SOGA1O94964 1423 aa31.71■■■□□ 2.67
FARSA-207ENST00000588025 BIVM-ERCC5R4GMW8 1640 aa31.7■■■□□ 2.67
FARSA-207ENST00000588025 CUX1P39880 1505 aa31.68■■■□□ 2.66
FARSA-207ENST00000588025 RUSC2Q8N2Y8 1516 aa31.63■■■□□ 2.65
FARSA-207ENST00000588025 FANCD2Q9BXW9 1451 aa31.57■■■□□ 2.64
FARSA-207ENST00000588025 EHMT2Q96KQ7 1210 aa31.57■■■□□ 2.64
FARSA-207ENST00000588025 LAMC3Q9Y6N6 1575 aa31.57■■■□□ 2.64
FARSA-207ENST00000588025 EEA1Q15075 1411 aa31.45■■■□□ 2.63
FARSA-207ENST00000588025 CSRNP3Q8WYN3 585 aa31.35■■■□□ 2.61
FARSA-207ENST00000588025 CEP164Q9UPV0 1460 aa31.34■■■□□ 2.61
FARSA-207ENST00000588025 KIF21AQ7Z4S6 1674 aa31.32■■■□□ 2.6
FARSA-207ENST00000588025 FGD5Q6ZNL6 1462 aa31.29■■■□□ 2.6
FARSA-207ENST00000588025 DNMBPQ6XZF7 1577 aa31.29■■■□□ 2.6
FARSA-207ENST00000588025 PDS5BQ9NTI5 1447 aa31.28■■■□□ 2.6
FARSA-207ENST00000588025 TOPBP1Q92547 1522 aa31.26■■■□□ 2.59
FARSA-207ENST00000588025 URB2Q14146 1524 aaKnown RBP31.22■■■□□ 2.59
FARSA-207ENST00000588025 KIF21BO75037 1637 aa31.16■■■□□ 2.58
FARSA-207ENST00000588025 POLA1P09884 1462 aaPredicted RBP31.13■■■□□ 2.57
FARSA-207ENST00000588025 GOLGA3Q08378 1498 aa31.13■■■□□ 2.57
FARSA-207ENST00000588025 KIF27Q86VH2 1401 aa31.12■■■□□ 2.57
FARSA-207ENST00000588025 CUX2O14529 1486 aa31.09■■■□□ 2.57
FARSA-207ENST00000588025 RAD54L2Q9Y4B4 1467 aa31.07■■■□□ 2.56
FARSA-207ENST00000588025 RAPGEF2Q9Y4G8 1499 aa31.05■■■□□ 2.56
FARSA-207ENST00000588025 TNIKQ9UKE5 1360 aa31.02■■■□□ 2.56
FARSA-207ENST00000588025 UBTFP17480 764 aaKnown RBP30.99■■■□□ 2.55
FARSA-207ENST00000588025 PRXQ9BXM0 1461 aa30.98■■■□□ 2.55
FARSA-207ENST00000588025 ABCA10Q8WWZ4 1543 aa30.96■■■□□ 2.55
FARSA-207ENST00000588025 CEP162Q5TB80 1403 aa30.95■■■□□ 2.54
FARSA-207ENST00000588025 MRC2Q9UBG0 1479 aa30.94■■■□□ 2.54
FARSA-207ENST00000588025 WDR97A6NE52 1622 aa30.93■■■□□ 2.54
FARSA-207ENST00000588025 ERICH3Q5RHP9 1530 aa30.9■■■□□ 2.54
FARSA-207ENST00000588025 IGF1RP08069 1367 aa30.87■■■□□ 2.53
FARSA-207ENST00000588025 ERCC6Q03468 1493 aa30.82■■■□□ 2.52
FARSA-207ENST00000588025 TARBP1Q13395 1621 aaKnown RBP30.8■■■□□ 2.52
FARSA-207ENST00000588025 WDR62O43379 1518 aa30.79■■■□□ 2.52
FARSA-207ENST00000588025 ABCA5Q8WWZ7 1642 aa30.76■■■□□ 2.51
FARSA-207ENST00000588025 THOC2Q8NI27 1593 aaKnown RBP30.75■■■□□ 2.51
FARSA-207ENST00000588025 TDRD9Q8NDG6 1382 aaKnown RBP30.73■■■□□ 2.51
FARSA-207ENST00000588025 CARMIL1Q5VZK9 1371 aa30.7■■■□□ 2.51
FARSA-207ENST00000588025 CLIP1P30622 1438 aa30.66■■■□□ 2.5
FARSA-207ENST00000588025 GAPVD1Q14C86 1478 aa30.64■■■□□ 2.5
FARSA-207ENST00000588025 CUL7Q14999 1698 aa30.61■■■□□ 2.49
FARSA-207ENST00000588025 RANGAP1P46060 587 aaPredicted RBP30.61■■■□□ 2.49
FARSA-207ENST00000588025 IFT140Q96RY7 1462 aa30.54■■■□□ 2.48
FARSA-207ENST00000588025 AQRO60306 1485 aaKnown RBP eCLIP30.53■■■□□ 2.484e-7■■■■□ 21.2
FARSA-207ENST00000588025 PBRM1Q86U86 1689 aa30.53■■■□□ 2.48
FARSA-207ENST00000588025 ZNF608Q9ULD9 1512 aaPredicted RBP30.53■■■□□ 2.48
FARSA-207ENST00000588025 PCGF6Q9BYE7 350 aa30.48■■■□□ 2.47
FARSA-207ENST00000588025 PPARGC1BQ86YN6 1023 aaKnown RBP30.46■■■□□ 2.47
FARSA-207ENST00000588025 ARAP1Q96P48 1450 aa30.41■■■□□ 2.46
FARSA-207ENST00000588025 EIF4G3O43432 1585 aaKnown RBP30.4■■■□□ 2.46
FARSA-207ENST00000588025 VPS8Q8N3P4 1428 aa30.39■■■□□ 2.46
FARSA-207ENST00000588025 ARHGAP35Q9NRY4 1499 aa30.37■■■□□ 2.45
FARSA-207ENST00000588025 GRIN2BQ13224 1484 aa30.36■■■□□ 2.45
FARSA-207ENST00000588025 ADAMTS12P58397 1594 aa30.35■■■□□ 2.45
FARSA-207ENST00000588025 CTTNBP2Q8WZ74 1663 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms