RNA–Protein interactions for RNA: ENST00000305557.9

RTKN-203, Transcript of rhotekin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RTKN, Length 2,646 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-203ENST00000305557 NISCHQ9Y2I1 1504 aa35.56■■■■□ 3.28
RTKN-203ENST00000305557 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.56
RTKN-203ENST00000305557 SUPT5HO00267 1087 aaKnown RBP30.57■■■□□ 2.48
RTKN-203ENST00000305557 ZCCHC6Q5VYS8 1495 aaKnown RBP30.13■■■□□ 2.41
RTKN-203ENST00000305557 MYO15BQ96JP2 1530 aa29.85■■■□□ 2.37
RTKN-203ENST00000305557 CCDC180Q9P1Z9 1646 aa29.83■■■□□ 2.37
RTKN-203ENST00000305557 DCAF8L2P0C7V8 631 aa29.78■■■□□ 2.36
RTKN-203ENST00000305557 CHIC1Q5VXU3 224 aa29.78■■■□□ 2.36
RTKN-203ENST00000305557 HRCP23327 699 aa29.51■■■□□ 2.31
RTKN-203ENST00000305557 PCGF6Q9BYE7 350 aa29.38■■■□□ 2.29
RTKN-203ENST00000305557 PPARGC1BQ86YN6 1023 aaKnown RBP29.1■■■□□ 2.25
RTKN-203ENST00000305557 LOC105371045A0A1W2PR82 267 aa29.09■■■□□ 2.25
RTKN-203ENST00000305557 DCAF1Q9Y4B6 1507 aa28.96■■■□□ 2.23
RTKN-203ENST00000305557 TRIM26Q12899 539 aaPredicted RBP28.53■■■□□ 2.16
RTKN-203ENST00000305557 ABCC9O60706 1549 aa28.5■■■□□ 2.15
RTKN-203ENST00000305557 RSF1Q96T23 1441 aaPredicted RBP28.39■■■□□ 2.14
RTKN-203ENST00000305557 SCRIBQ14160 1630 aa28.37■■■□□ 2.13
RTKN-203ENST00000305557 FAM9AQ8IZU1 332 aaPredicted RBP28.3■■■□□ 2.12
RTKN-203ENST00000305557 TRIM41Q8WV44 630 aa28.29■■■□□ 2.12
RTKN-203ENST00000305557 EHMT2Q96KQ7 1210 aa28.22■■■□□ 2.11
RTKN-203ENST00000305557 RB1CC1Q8TDY2 1594 aa28.19■■■□□ 2.1
RTKN-203ENST00000305557 ZEB1P37275 1124 aaPredicted RBP27.92■■■□□ 2.06
RTKN-203ENST00000305557 CECR2Q9BXF3 1484 aa27.91■■■□□ 2.06
RTKN-203ENST00000305557 MROH2BQ7Z745 1585 aa27.79■■■□□ 2.04
RTKN-203ENST00000305557 WIZO95785 1651 aa27.66■■■□□ 2.02
RTKN-203ENST00000305557 SCAF1Q9H7N4 1312 aaKnown RBP27.56■■■□□ 2
RTKN-203ENST00000305557 NACADO15069 1562 aa27.55■■■□□ 2
RTKN-203ENST00000305557 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.52■■■□□ 2
RTKN-203ENST00000305557 TTBK1Q5TCY1 1321 aaPredicted RBP27.37■■□□□ 1.97
RTKN-203ENST00000305557 CCER1Q8TC90 406 aaPredicted RBP27.37■■□□□ 1.97
RTKN-203ENST00000305557 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
RTKN-203ENST00000305557 EIF4G1Q04637 1599 aaKnown RBP27.34■■□□□ 1.97
RTKN-203ENST00000305557 ABCC8Q09428 1581 aa27.27■■□□□ 1.96
RTKN-203ENST00000305557 CCDC88BA6NC98 1476 aa27.22■■□□□ 1.95
RTKN-203ENST00000305557 SOGA1O94964 1423 aa27.1■■□□□ 1.93
RTKN-203ENST00000305557 NEUROD1Q13562 356 aa27.1■■□□□ 1.93
RTKN-203ENST00000305557 PELP1Q8IZL8 1130 aaKnown RBP27.08■■□□□ 1.93
RTKN-203ENST00000305557 CEP162Q5TB80 1403 aa27.07■■□□□ 1.92
RTKN-203ENST00000305557 TOP2AP11388 1531 aaKnown RBP27.07■■□□□ 1.92
RTKN-203ENST00000305557 ACIN1Q9UKV3 1341 aaKnown RBP27.05■■□□□ 1.92
RTKN-203ENST00000305557 DIEXFQ68CQ4 756 aaKnown RBP27.03■■□□□ 1.92
RTKN-203ENST00000305557 WRNQ14191 1432 aaPredicted RBP eCLIP27.01■■□□□ 1.92
RTKN-203ENST00000305557 SMARCA2P51531 1590 aa27.01■■□□□ 1.91
RTKN-203ENST00000305557 RUSC2Q8N2Y8 1516 aa26.99■■□□□ 1.91
RTKN-203ENST00000305557 SMARCA4P51532 1647 aa26.99■■□□□ 1.91
RTKN-203ENST00000305557 UBTFP17480 764 aaKnown RBP26.93■■□□□ 1.9
RTKN-203ENST00000305557 TNIKQ9UKE5 1360 aa26.92■■□□□ 1.9
RTKN-203ENST00000305557 CSRNP3Q8WYN3 585 aa26.9■■□□□ 1.9
RTKN-203ENST00000305557 GTF3C3Q9Y5Q9 886 aa26.84■■□□□ 1.89
RTKN-203ENST00000305557 UNC13AQ9UPW8 1703 aa26.78■■□□□ 1.88
RTKN-203ENST00000305557 CENPBP07199 599 aaPredicted RBP26.72■■□□□ 1.87
RTKN-203ENST00000305557 PABPN1Q86U42 306 aaKnown RBP eCLIP26.72■■□□□ 1.876e-7■□□□□ 8.2
RTKN-203ENST00000305557 EEA1Q15075 1411 aa26.71■■□□□ 1.87
RTKN-203ENST00000305557 GOLGA3Q08378 1498 aa26.68■■□□□ 1.86
RTKN-203ENST00000305557 ZNF316A6NFI3 1004 aaPredicted RBP26.67■■□□□ 1.86
RTKN-203ENST00000305557 HNRNPUL2Q1KMD3 747 aaKnown RBP26.66■■□□□ 1.86
RTKN-203ENST00000305557 YTHDC1Q96MU7 727 aaKnown RBP26.59■■□□□ 1.85
RTKN-203ENST00000305557 RANGAP1P46060 587 aaPredicted RBP26.52■■□□□ 1.84
RTKN-203ENST00000305557 SYNJ1O43426 1573 aa26.52■■□□□ 1.84
RTKN-203ENST00000305557 MIER1Q8N108 512 aa26.48■■□□□ 1.83
RTKN-203ENST00000305557 CLIP1P30622 1438 aa26.47■■□□□ 1.83
RTKN-203ENST00000305557 CEP164Q9UPV0 1460 aa26.46■■□□□ 1.83
RTKN-203ENST00000305557 BICRAQ9NZM4 1560 aa26.45■■□□□ 1.82
RTKN-203ENST00000305557 KIF21BO75037 1637 aa26.38■■□□□ 1.81
RTKN-203ENST00000305557 RAPGEF2Q9Y4G8 1499 aa26.37■■□□□ 1.81
RTKN-203ENST00000305557 VPS8Q8N3P4 1428 aa26.35■■□□□ 1.81
RTKN-203ENST00000305557 PEG3Q9GZU2 1588 aa26.32■■□□□ 1.8
RTKN-203ENST00000305557 APLP2Q06481 763 aa26.3■■□□□ 1.8
RTKN-203ENST00000305557 ATAD2BQ9ULI0 1458 aa26.25■■□□□ 1.79
RTKN-203ENST00000305557 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
RTKN-203ENST00000305557 KANK4Q5T7N3 995 aaPredicted RBP26.08■■□□□ 1.77
RTKN-203ENST00000305557 DHX57Q6P158 1386 aaKnown RBP26.04■■□□□ 1.76
RTKN-203ENST00000305557 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
RTKN-203ENST00000305557 ARAP1Q96P48 1450 aa26■■□□□ 1.75
RTKN-203ENST00000305557 PRXQ9BXM0 1461 aa25.94■■□□□ 1.74
RTKN-203ENST00000305557 BIVM-ERCC5R4GMW8 1640 aa25.89■■□□□ 1.74
RTKN-203ENST00000305557 ERICH3Q5RHP9 1530 aa25.87■■□□□ 1.73
RTKN-203ENST00000305557 CLSPNQ9HAW4 1339 aa25.87■■□□□ 1.73
RTKN-203ENST00000305557 ITGAEP38570 1179 aa25.85■■□□□ 1.73
RTKN-203ENST00000305557 CUX1P39880 1505 aa25.81■■□□□ 1.72
RTKN-203ENST00000305557 RRBP1Q9P2E9 1410 aaKnown RBP25.78■■□□□ 1.72
RTKN-203ENST00000305557 KIF27Q86VH2 1401 aa25.72■■□□□ 1.71
RTKN-203ENST00000305557 SUPT16HQ9Y5B9 1047 aaKnown RBP25.72■■□□□ 1.71
RTKN-203ENST00000305557 CCNB3Q8WWL7 1395 aa25.71■■□□□ 1.71
RTKN-203ENST00000305557 ARHGAP35Q9NRY4 1499 aa25.71■■□□□ 1.71
RTKN-203ENST00000305557 MYT1Q01538 1121 aa25.69■■□□□ 1.7
RTKN-203ENST00000305557 KCNH8Q96L42 1107 aa25.67■■□□□ 1.7
RTKN-203ENST00000305557 CUX2O14529 1486 aa25.63■■□□□ 1.69
RTKN-203ENST00000305557 RAB3GAP2Q9H2M9 1393 aa25.6■■□□□ 1.69
RTKN-203ENST00000305557 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
RTKN-203ENST00000305557 HMGXB3Q12766 1538 aa25.53■■□□□ 1.68
RTKN-203ENST00000305557 CFTRP13569 1480 aa25.53■■□□□ 1.68
RTKN-203ENST00000305557 MAPKBP1O60336 1514 aa25.53■■□□□ 1.68
RTKN-203ENST00000305557 IGF1RP08069 1367 aa25.49■■□□□ 1.67
RTKN-203ENST00000305557 SIN3AQ96ST3 1273 aa25.49■■□□□ 1.67
RTKN-203ENST00000305557 P3H3Q8IVL6 736 aa25.44■■□□□ 1.66
RTKN-203ENST00000305557 PHLDB1Q86UU1 1377 aa25.43■■□□□ 1.66
RTKN-203ENST00000305557 TIAM1Q13009 1591 aa25.43■■□□□ 1.66
RTKN-203ENST00000305557 FAM50AQ14320 339 aaKnown RBP25.43■■□□□ 1.66
RTKN-203ENST00000305557 DDX10Q13206 875 aaKnown RBP25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms