RNA–Protein interactions for RNA: ENST00000587488.5

FARSA-205, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

TSL 3

Gene FARSA, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-205ENST00000587488 NISCHQ9Y2I1 1504 aa33.75■■■□□ 2.99
FARSA-205ENST00000587488 CCDC180Q9P1Z9 1646 aa29.93■■■□□ 2.38
FARSA-205ENST00000587488 ABCC9O60706 1549 aa29.32■■■□□ 2.28
FARSA-205ENST00000587488 DCAF8L2P0C7V8 631 aa28.19■■■□□ 2.1
FARSA-205ENST00000587488 RB1CC1Q8TDY2 1594 aa28.17■■■□□ 2.1
FARSA-205ENST00000587488 NACADO15069 1562 aa28.16■■■□□ 2.1
FARSA-205ENST00000587488 ZCCHC6Q5VYS8 1495 aaKnown RBP28.13■■■□□ 2.09
FARSA-205ENST00000587488 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
FARSA-205ENST00000587488 DCAF1Q9Y4B6 1507 aa27.91■■■□□ 2.06
FARSA-205ENST00000587488 UNC13AQ9UPW8 1703 aa27.53■■■□□ 2
FARSA-205ENST00000587488 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
FARSA-205ENST00000587488 BICRAQ9NZM4 1560 aa27.36■■□□□ 1.97
FARSA-205ENST00000587488 SCRIBQ14160 1630 aa27.36■■□□□ 1.97
FARSA-205ENST00000587488 SHROOM4Q9ULL8 1493 aa27.03■■□□□ 1.92
FARSA-205ENST00000587488 DNAJC5BQ9UF47 199 aa26.92■■□□□ 1.9
FARSA-205ENST00000587488 EIF4G1Q04637 1599 aaKnown RBP26.62■■□□□ 1.85
FARSA-205ENST00000587488 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
FARSA-205ENST00000587488 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.81
FARSA-205ENST00000587488 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
FARSA-205ENST00000587488 BAZ1AQ9NRL2 1556 aaPredicted RBP26.13■■□□□ 1.77
FARSA-205ENST00000587488 ATAD2BQ9ULI0 1458 aa26.04■■□□□ 1.76
FARSA-205ENST00000587488 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
FARSA-205ENST00000587488 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
FARSA-205ENST00000587488 SMARCA2P51531 1590 aa25.98■■□□□ 1.75
FARSA-205ENST00000587488 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
FARSA-205ENST00000587488 HMGXB3Q12766 1538 aa25.86■■□□□ 1.73
FARSA-205ENST00000587488 BAZ1BQ9UIG0 1483 aaKnown RBP25.8■■□□□ 1.72
FARSA-205ENST00000587488 RSF1Q96T23 1441 aaPredicted RBP25.76■■□□□ 1.71
FARSA-205ENST00000587488 WIZO95785 1651 aa25.73■■□□□ 1.71
FARSA-205ENST00000587488 TOP2AP11388 1531 aaKnown RBP25.46■■□□□ 1.67
FARSA-205ENST00000587488 NESP48681 1621 aa25.39■■□□□ 1.66
FARSA-205ENST00000587488 LAMC3Q9Y6N6 1575 aa25.28■■□□□ 1.64
FARSA-205ENST00000587488 CADPSQ9ULU8 1353 aa25.26■■□□□ 1.63
FARSA-205ENST00000587488 ERCC6Q03468 1493 aa25.24■■□□□ 1.63
FARSA-205ENST00000587488 CCDC88BA6NC98 1476 aa25.18■■□□□ 1.62
FARSA-205ENST00000587488 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
FARSA-205ENST00000587488 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
FARSA-205ENST00000587488 CFTRP13569 1480 aa25.12■■□□□ 1.61
FARSA-205ENST00000587488 KIF21AQ7Z4S6 1674 aa25.04■■□□□ 1.6
FARSA-205ENST00000587488 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
FARSA-205ENST00000587488 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
FARSA-205ENST00000587488 CUX2O14529 1486 aa24.96■■□□□ 1.59
FARSA-205ENST00000587488 CEP164Q9UPV0 1460 aa24.91■■□□□ 1.58
FARSA-205ENST00000587488 MRC2Q9UBG0 1479 aa24.88■■□□□ 1.57
FARSA-205ENST00000587488 PRDM2Q13029 1718 aa24.85■■□□□ 1.57
FARSA-205ENST00000587488 WDR62O43379 1518 aa24.79■■□□□ 1.56
FARSA-205ENST00000587488 URB2Q14146 1524 aaKnown RBP24.73■■□□□ 1.55
FARSA-205ENST00000587488 TOPBP1Q92547 1522 aa24.57■■□□□ 1.52
FARSA-205ENST00000587488 ABCC8Q09428 1581 aa24.54■■□□□ 1.52
FARSA-205ENST00000587488 DNMBPQ6XZF7 1577 aa24.53■■□□□ 1.52
FARSA-205ENST00000587488 CUX1P39880 1505 aa24.41■■□□□ 1.5
FARSA-205ENST00000587488 IFT140Q96RY7 1462 aa24.4■■□□□ 1.5
FARSA-205ENST00000587488 POLA1P09884 1462 aaPredicted RBP24.38■■□□□ 1.49
FARSA-205ENST00000587488 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
FARSA-205ENST00000587488 ZNF608Q9ULD9 1512 aaPredicted RBP24.31■■□□□ 1.48
FARSA-205ENST00000587488 TARBP1Q13395 1621 aaKnown RBP24.29■■□□□ 1.48
FARSA-205ENST00000587488 RAD54L2Q9Y4B4 1467 aa24.28■■□□□ 1.48
FARSA-205ENST00000587488 SOGA1O94964 1423 aa24.27■■□□□ 1.48
FARSA-205ENST00000587488 WRNQ14191 1432 aaPredicted RBP eCLIP24.26■■□□□ 1.47
FARSA-205ENST00000587488 SYNJ1O43426 1573 aa24.2■■□□□ 1.47
FARSA-205ENST00000587488 TOP2BQ02880 1626 aa24.18■■□□□ 1.46
FARSA-205ENST00000587488 EIF4G3O43432 1585 aaKnown RBP24.18■■□□□ 1.46
FARSA-205ENST00000587488 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.466e-7■■■■■ 27.8
FARSA-205ENST00000587488 BIVM-ERCC5R4GMW8 1640 aa24.17■■□□□ 1.46
FARSA-205ENST00000587488 DNAJC5Q9H3Z4 198 aa24.17■■□□□ 1.46
FARSA-205ENST00000587488 TDRD9Q8NDG6 1382 aaKnown RBP24.15■■□□□ 1.46
FARSA-205ENST00000587488 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
FARSA-205ENST00000587488 ABCA10Q8WWZ4 1543 aa24.08■■□□□ 1.45
FARSA-205ENST00000587488 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
FARSA-205ENST00000587488 GRIN2BQ13224 1484 aa23.97■■□□□ 1.43
FARSA-205ENST00000587488 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
FARSA-205ENST00000587488 SNAPC4Q5SXM2 1469 aa23.94■■□□□ 1.42
FARSA-205ENST00000587488 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
FARSA-205ENST00000587488 MAGI1Q96QZ7 1491 aaPredicted RBP23.89■■□□□ 1.42
FARSA-205ENST00000587488 PBRM1Q86U86 1689 aa23.89■■□□□ 1.41
FARSA-205ENST00000587488 FBLN2P98095 1184 aa23.87■■□□□ 1.41
FARSA-205ENST00000587488 CHD1O14646 1710 aa23.85■■□□□ 1.41
FARSA-205ENST00000587488 CHMP7Q8WUX9 453 aaPredicted RBP23.81■■□□□ 1.4
FARSA-205ENST00000587488 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
FARSA-205ENST00000587488 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
FARSA-205ENST00000587488 KIF27Q86VH2 1401 aa23.74■■□□□ 1.39
FARSA-205ENST00000587488 ADAMTS12P58397 1594 aa23.74■■□□□ 1.39
FARSA-205ENST00000587488 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
FARSA-205ENST00000587488 TRIM41Q8WV44 630 aa23.71■■□□□ 1.39
FARSA-205ENST00000587488 IGF1RP08069 1367 aa23.67■■□□□ 1.38
FARSA-205ENST00000587488 GRIN2AQ12879 1464 aa23.66■■□□□ 1.38
FARSA-205ENST00000587488 CLASP1Q7Z460 1538 aa23.63■■□□□ 1.37
FARSA-205ENST00000587488 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
FARSA-205ENST00000587488 NUP160Q12769 1436 aa23.58■■□□□ 1.36
FARSA-205ENST00000587488 ARHGEF11O15085 1522 aa23.55■■□□□ 1.36
FARSA-205ENST00000587488 CEP170Q5SW79 1584 aa23.55■■□□□ 1.36
FARSA-205ENST00000587488 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
FARSA-205ENST00000587488 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
FARSA-205ENST00000587488 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
FARSA-205ENST00000587488 CUL7Q14999 1698 aa23.54■■□□□ 1.36
FARSA-205ENST00000587488 CARMIL1Q5VZK9 1371 aa23.52■■□□□ 1.36
FARSA-205ENST00000587488 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
FARSA-205ENST00000587488 ARAP1Q96P48 1450 aa23.39■■□□□ 1.34
FARSA-205ENST00000587488 RAPGEF2Q9Y4G8 1499 aa23.36■■□□□ 1.33
FARSA-205ENST00000587488 SHROOM2Q13796 1616 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms