RNA–Protein interactions for RNA: ENST00000350057.9

MDM2-206, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-206ENST00000350057 AEBP2Q6ZN18 517 aaPredicted RBP16.34■□□□□ 0.21
MDM2-206ENST00000350057 CHIC1Q5VXU3 224 aa15.67■□□□□ 0.1
MDM2-206ENST00000350057 SENP3Q9H4L4 574 aaPredicted RBP14.24□□□□□ -0.13
MDM2-206ENST00000350057 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
MDM2-206ENST00000350057 FOXD1Q16676 465 aa13.08□□□□□ -0.32
MDM2-206ENST00000350057 PLPPR3Q6T4P5 718 aa12.59□□□□□ -0.39
MDM2-206ENST00000350057 MSH5O43196 834 aa12.49□□□□□ -0.41
MDM2-206ENST00000350057 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
MDM2-206ENST00000350057 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
MDM2-206ENST00000350057 ADRA2BP18089 450 aa12.08□□□□□ -0.48
MDM2-206ENST00000350057 POTEDQ86YR6 584 aa12.05□□□□□ -0.48
MDM2-206ENST00000350057 SCAF1Q9H7N4 1312 aaKnown RBP11.4□□□□□ -0.58
MDM2-206ENST00000350057 DMRT2Q9Y5R5 561 aa11.22□□□□□ -0.61
MDM2-206ENST00000350057 MAPK8IP2Q13387 824 aaPredicted RBP11.05□□□□□ -0.64
MDM2-206ENST00000350057 PPP4R3CPQ6ZMV5 832 aa10.92□□□□□ -0.66
MDM2-206ENST00000350057 CNKSR2Q8WXI2 1034 aa10.84□□□□□ -0.67
MDM2-206ENST00000350057 HOXD11P31277 338 aaPredicted RBP10.81□□□□□ -0.68
MDM2-206ENST00000350057 RNF216Q9NWF9 866 aaPredicted RBP10.75□□□□□ -0.69
MDM2-206ENST00000350057 NCBP3Q53F19 620 aaKnown RBP10.68□□□□□ -0.7
MDM2-206ENST00000350057 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
MDM2-206ENST00000350057 DNAJC5BQ9UF47 199 aa10.65□□□□□ -0.7
MDM2-206ENST00000350057 CACNB1Q02641 598 aaPredicted RBP10.62□□□□□ -0.71
MDM2-206ENST00000350057 RNF39Q9H2S5 420 aa10.53□□□□□ -0.72
MDM2-206ENST00000350057 C1QBPQ07021 282 aaKnown RBP10.5□□□□□ -0.73
MDM2-206ENST00000350057 NPM3O75607 178 aaKnown RBP10.31□□□□□ -0.76
MDM2-206ENST00000350057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.28□□□□□ -0.761e-8■■□□□ 11.6
MDM2-206ENST00000350057 APLP2Q06481 763 aa10.05□□□□□ -0.8
MDM2-206ENST00000350057 KCNA4P22459 653 aa10□□□□□ -0.81
MDM2-206ENST00000350057 U3KPZ7 1027 aaPredicted RBP9.98□□□□□ -0.81
MDM2-206ENST00000350057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.97□□□□□ -0.81
MDM2-206ENST00000350057 HNRNPUL2Q1KMD3 747 aaKnown RBP9.97□□□□□ -0.81
MDM2-206ENST00000350057 CAPN15O75808 1086 aa9.88□□□□□ -0.83
MDM2-206ENST00000350057 SAMD1Q6SPF0 538 aaPredicted RBP9.83□□□□□ -0.84
MDM2-206ENST00000350057 ZNF219Q9P2Y4 722 aaPredicted RBP9.82□□□□□ -0.84
MDM2-206ENST00000350057 DSG3P32926 999 aa9.82□□□□□ -0.84
MDM2-206ENST00000350057 SLC4A2P04920 1241 aa9.8□□□□□ -0.84
MDM2-206ENST00000350057 SPINK5Q9NQ38 1064 aaPredicted RBP9.76□□□□□ -0.85
MDM2-206ENST00000350057 MYCNP04198 464 aaPredicted RBP9.67□□□□□ -0.86
MDM2-206ENST00000350057 TRHP20396 242 aaPredicted RBP9.66□□□□□ -0.86
MDM2-206ENST00000350057 RBM42Q9BTD8 480 aaKnown RBP9.58□□□□□ -0.88
MDM2-206ENST00000350057 SLC4A1APQ9BWU0 796 aaKnown RBP9.54□□□□□ -0.88
MDM2-206ENST00000350057 ABCB7O75027 752 aa9.52□□□□□ -0.89
MDM2-206ENST00000350057 FOXD4L1Q9NU39 408 aa9.5□□□□□ -0.89
MDM2-206ENST00000350057 POTEHQ6S545 545 aa9.48□□□□□ -0.89
MDM2-206ENST00000350057 ZBTB12Q9Y330 459 aaPredicted RBP9.48□□□□□ -0.89
MDM2-206ENST00000350057 POLA2Q14181 598 aa9.42□□□□□ -0.9
MDM2-206ENST00000350057 ATXN8OSP0DMR3 200 aa9.34□□□□□ -0.91
MDM2-206ENST00000350057 AKT1S1Q96B36 256 aa9.28□□□□□ -0.92
MDM2-206ENST00000350057 CHRDL2Q6WN34 429 aa9.22□□□□□ -0.93
MDM2-206ENST00000350057 ATF5Q9Y2D1 282 aaPredicted RBP9.17□□□□□ -0.94
MDM2-206ENST00000350057 FBLN2P98095 1184 aa9.14□□□□□ -0.95
MDM2-206ENST00000350057 ZBTB22O15209 634 aa9.1□□□□□ -0.95
MDM2-206ENST00000350057 SPDYE2BA6NHP3 402 aa9.08□□□□□ -0.96
MDM2-206ENST00000350057 SPDYE6P0CI01 402 aa9.08□□□□□ -0.96
MDM2-206ENST00000350057 SPDYE2Q495Y8 402 aa9.08□□□□□ -0.96
MDM2-206ENST00000350057 REM2Q8IYK8 340 aaPredicted RBP9.07□□□□□ -0.96
MDM2-206ENST00000350057 OSCARQ8IYS5 282 aa9.06□□□□□ -0.96
MDM2-206ENST00000350057 PITPNM1O00562 1244 aa8.94□□□□□ -0.98
MDM2-206ENST00000350057 FXR2P51116 673 aaKnown RBP eCLIP8.94□□□□□ -0.98
MDM2-206ENST00000350057 PIP4P2Q8N4L2 257 aa8.94□□□□□ -0.98
MDM2-206ENST00000350057 SPDYE1Q8NFV5 336 aaPredicted RBP8.94□□□□□ -0.98
MDM2-206ENST00000350057 SP7Q8TDD2 431 aaPredicted RBP8.9□□□□□ -0.98
MDM2-206ENST00000350057 ZNF692Q9BU19 519 aaPredicted RBP8.88□□□□□ -0.99
MDM2-206ENST00000350057 SSUH2Q9Y2M2 353 aa8.87□□□□□ -0.99
MDM2-206ENST00000350057 HAX1O00165 279 aa8.82□□□□□ -1
MDM2-206ENST00000350057 MKRN4PQ13434 485 aaPredicted RBP8.81□□□□□ -1
MDM2-206ENST00000350057 CLEC11AQ9Y240 323 aa8.78□□□□□ -1
MDM2-206ENST00000350057 PRKAR2AP13861 404 aaKnown RBP8.74□□□□□ -1.01
MDM2-206ENST00000350057 CSRNP3Q8WYN3 585 aa8.73□□□□□ -1.01
MDM2-206ENST00000350057 PRR29P0C7W0 189 aa8.71□□□□□ -1.01
MDM2-206ENST00000350057 PABPN1Q86U42 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
MDM2-206ENST00000350057 CLCN6P51797 869 aa8.69□□□□□ -1.02
MDM2-206ENST00000350057 STAG3Q9UJ98 1225 aa8.67□□□□□ -1.02
MDM2-206ENST00000350057 C19orf67A6NJJ6 358 aa8.64□□□□□ -1.03
MDM2-206ENST00000350057 EHMT2Q96KQ7 1210 aa8.54□□□□□ -1.04
MDM2-206ENST00000350057 FARP1Q9Y4F1 1045 aaPredicted RBP8.53□□□□□ -1.04
MDM2-206ENST00000350057 EVX2Q03828 476 aa8.52□□□□□ -1.05
MDM2-206ENST00000350057 SPDYE4A6NLX3 237 aa8.5□□□□□ -1.05
MDM2-206ENST00000350057 CHADLQ6NUI6 762 aa8.5□□□□□ -1.05
MDM2-206ENST00000350057 GABBR2O75899 941 aa8.48□□□□□ -1.05
MDM2-206ENST00000350057 CD44P16070 742 aaKnown RBP8.47□□□□□ -1.05
MDM2-206ENST00000350057 PAK3O75914 559 aaPredicted RBP8.44□□□□□ -1.06
MDM2-206ENST00000350057 NPM1P06748 294 aaKnown RBP eCLIP8.43□□□□□ -1.06
MDM2-206ENST00000350057 ZNF579Q8NAF0 562 aaKnown RBP8.39□□□□□ -1.07
MDM2-206ENST00000350057 CREBZFQ9NS37 354 aa8.38□□□□□ -1.07
MDM2-206ENST00000350057 DCBLD2Q96PD2 775 aa8.35□□□□□ -1.07
MDM2-206ENST00000350057 PLEKHG5O94827 1062 aa8.34□□□□□ -1.07
MDM2-206ENST00000350057 LHX8Q68G74 356 aa8.34□□□□□ -1.07
MDM2-206ENST00000350057 ZRANB1Q9UGI0 708 aa8.34□□□□□ -1.07
MDM2-206ENST00000350057 PROM2Q8N271 834 aa8.3□□□□□ -1.08
MDM2-206ENST00000350057 MNX1P50219 401 aaPredicted RBP8.21□□□□□ -1.09
MDM2-206ENST00000350057 ZBTB47Q9UFB7 747 aaPredicted RBP8.21□□□□□ -1.09
MDM2-206ENST00000350057 POTEIP0CG38 1075 aa8.2□□□□□ -1.1
MDM2-206ENST00000350057 GALR2O43603 387 aaPredicted RBP8.16□□□□□ -1.1
MDM2-206ENST00000350057 MIER1Q8N108 512 aa8.13□□□□□ -1.11
MDM2-206ENST00000350057 SLC39A7Q92504 469 aa8.12□□□□□ -1.11
MDM2-206ENST00000350057 PHF12Q96QT6 1004 aa8.12□□□□□ -1.11
MDM2-206ENST00000350057 C7P10643 843 aa8.11□□□□□ -1.11
MDM2-206ENST00000350057 ASTLQ6HA08 431 aaPredicted RBP8.1□□□□□ -1.11
MDM2-206ENST00000350057 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms