RNA–Protein interactions for RNA: ENST00000354050.8

PLTP-201, Transcript of phospholipid transfer protein, humanhuman

TSL 1 (best) BASIC

Gene PLTP, Length 1,731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLTP-201ENST00000354050 NISCHQ9Y2I1 1504 aa34.03■■■■□ 3.04
PLTP-201ENST00000354050 CCDC180Q9P1Z9 1646 aa29.74■■■□□ 2.35
PLTP-201ENST00000354050 ZCCHC6Q5VYS8 1495 aaKnown RBP28.62■■■□□ 2.17
PLTP-201ENST00000354050 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
PLTP-201ENST00000354050 DCAF8L2P0C7V8 631 aa27.99■■■□□ 2.07
PLTP-201ENST00000354050 ABCC9O60706 1549 aa27.96■■■□□ 2.07
PLTP-201ENST00000354050 MYO15BQ96JP2 1530 aa27.79■■■□□ 2.04
PLTP-201ENST00000354050 SHROOM4Q9ULL8 1493 aa27.77■■■□□ 2.04
PLTP-201ENST00000354050 NACADO15069 1562 aa27.62■■■□□ 2.01
PLTP-201ENST00000354050 RB1CC1Q8TDY2 1594 aa27.39■■□□□ 1.97
PLTP-201ENST00000354050 SCRIBQ14160 1630 aa27.31■■□□□ 1.96
PLTP-201ENST00000354050 UNC13AQ9UPW8 1703 aa26.89■■□□□ 1.9
PLTP-201ENST00000354050 SUPT5HO00267 1087 aaKnown RBP26.72■■□□□ 1.87
PLTP-201ENST00000354050 BICRAQ9NZM4 1560 aa26.53■■□□□ 1.84
PLTP-201ENST00000354050 CECR2Q9BXF3 1484 aa26.39■■□□□ 1.82
PLTP-201ENST00000354050 RSF1Q96T23 1441 aaPredicted RBP26.39■■□□□ 1.81
PLTP-201ENST00000354050 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
PLTP-201ENST00000354050 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
PLTP-201ENST00000354050 MROH2BQ7Z745 1585 aa26.29■■□□□ 1.8
PLTP-201ENST00000354050 SMARCA4P51532 1647 aa26.19■■□□□ 1.78
PLTP-201ENST00000354050 WIZO95785 1651 aa26.11■■□□□ 1.77
PLTP-201ENST00000354050 TOP2AP11388 1531 aaKnown RBP25.86■■□□□ 1.73
PLTP-201ENST00000354050 PEG3Q9GZU2 1588 aa25.85■■□□□ 1.73
PLTP-201ENST00000354050 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
PLTP-201ENST00000354050 SMARCA2P51531 1590 aa25.72■■□□□ 1.71
PLTP-201ENST00000354050 ATAD2BQ9ULI0 1458 aa25.68■■□□□ 1.7
PLTP-201ENST00000354050 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
PLTP-201ENST00000354050 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.68
PLTP-201ENST00000354050 CCDC88BA6NC98 1476 aa25.53■■□□□ 1.68
PLTP-201ENST00000354050 HMGXB3Q12766 1538 aa25.48■■□□□ 1.67
PLTP-201ENST00000354050 NCAPD3P42695 1498 aa25.44■■□□□ 1.66
PLTP-201ENST00000354050 CC2D2AQ9P2K1 1620 aa25.34■■□□□ 1.65
PLTP-201ENST00000354050 DNAJC5BQ9UF47 199 aa25.29■■□□□ 1.64
PLTP-201ENST00000354050 TRIM41Q8WV44 630 aa25.13■■□□□ 1.61
PLTP-201ENST00000354050 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
PLTP-201ENST00000354050 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
PLTP-201ENST00000354050 CFTRP13569 1480 aa24.9■■□□□ 1.58
PLTP-201ENST00000354050 WRNQ14191 1432 aaPredicted RBP eCLIP24.86■■□□□ 1.57
PLTP-201ENST00000354050 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
PLTP-201ENST00000354050 CADPSQ9ULU8 1353 aa24.78■■□□□ 1.56
PLTP-201ENST00000354050 TOP2BQ02880 1626 aa24.7■■□□□ 1.54
PLTP-201ENST00000354050 BIVM-ERCC5R4GMW8 1640 aa24.7■■□□□ 1.54
PLTP-201ENST00000354050 FAM9AQ8IZU1 332 aaPredicted RBP24.66■■□□□ 1.54
PLTP-201ENST00000354050 LAMC3Q9Y6N6 1575 aa24.63■■□□□ 1.53
PLTP-201ENST00000354050 LOC105371045A0A1W2PR82 267 aa24.6■■□□□ 1.53
PLTP-201ENST00000354050 CUX1P39880 1505 aa24.59■■□□□ 1.53
PLTP-201ENST00000354050 EEA1Q15075 1411 aa24.57■■□□□ 1.52
PLTP-201ENST00000354050 NESP48681 1621 aa24.56■■□□□ 1.52
PLTP-201ENST00000354050 FANCD2Q9BXW9 1451 aa24.55■■□□□ 1.52
PLTP-201ENST00000354050 SOGA1O94964 1423 aa24.54■■□□□ 1.52
PLTP-201ENST00000354050 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
PLTP-201ENST00000354050 CEP164Q9UPV0 1460 aa24.41■■□□□ 1.5
PLTP-201ENST00000354050 PDS5BQ9NTI5 1447 aa24.39■■□□□ 1.49
PLTP-201ENST00000354050 DNMBPQ6XZF7 1577 aa24.38■■□□□ 1.49
PLTP-201ENST00000354050 KIF21AQ7Z4S6 1674 aa24.36■■□□□ 1.49
PLTP-201ENST00000354050 CSRNP3Q8WYN3 585 aa24.35■■□□□ 1.49
PLTP-201ENST00000354050 FGD5Q6ZNL6 1462 aa24.31■■□□□ 1.48
PLTP-201ENST00000354050 EHMT2Q96KQ7 1210 aa24.3■■□□□ 1.48
PLTP-201ENST00000354050 TOPBP1Q92547 1522 aa24.29■■□□□ 1.48
PLTP-201ENST00000354050 KIF21BO75037 1637 aa24.28■■□□□ 1.48
PLTP-201ENST00000354050 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
PLTP-201ENST00000354050 URB2Q14146 1524 aaKnown RBP24.24■■□□□ 1.47
PLTP-201ENST00000354050 KIF27Q86VH2 1401 aa24.23■■□□□ 1.47
PLTP-201ENST00000354050 POLA1P09884 1462 aaPredicted RBP24.18■■□□□ 1.46
PLTP-201ENST00000354050 CUX2O14529 1486 aa24.16■■□□□ 1.46
PLTP-201ENST00000354050 TNIKQ9UKE5 1360 aa24.13■■□□□ 1.45
PLTP-201ENST00000354050 MRC2Q9UBG0 1479 aa24.1■■□□□ 1.45
PLTP-201ENST00000354050 ERICH3Q5RHP9 1530 aa24.09■■□□□ 1.45
PLTP-201ENST00000354050 ABCA10Q8WWZ4 1543 aa24.09■■□□□ 1.45
PLTP-201ENST00000354050 WDR97A6NE52 1622 aa24.09■■□□□ 1.45
PLTP-201ENST00000354050 PRXQ9BXM0 1461 aa24.07■■□□□ 1.44
PLTP-201ENST00000354050 RAD54L2Q9Y4B4 1467 aa24.07■■□□□ 1.44
PLTP-201ENST00000354050 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
PLTP-201ENST00000354050 UBTFP17480 764 aaKnown RBP24.06■■□□□ 1.44
PLTP-201ENST00000354050 CEP162Q5TB80 1403 aa24.03■■□□□ 1.44
PLTP-201ENST00000354050 ERCC6Q03468 1493 aa24■■□□□ 1.43
PLTP-201ENST00000354050 WDR62O43379 1518 aa23.98■■□□□ 1.43
PLTP-201ENST00000354050 TARBP1Q13395 1621 aaKnown RBP23.95■■□□□ 1.42
PLTP-201ENST00000354050 IGF1RP08069 1367 aa23.95■■□□□ 1.42
PLTP-201ENST00000354050 ABCA5Q8WWZ7 1642 aa23.94■■□□□ 1.42
PLTP-201ENST00000354050 THOC2Q8NI27 1593 aaKnown RBP23.92■■□□□ 1.42
PLTP-201ENST00000354050 CUL7Q14999 1698 aa23.9■■□□□ 1.42
PLTP-201ENST00000354050 CARMIL1Q5VZK9 1371 aa23.86■■□□□ 1.41
PLTP-201ENST00000354050 GAPVD1Q14C86 1478 aa23.83■■□□□ 1.41
PLTP-201ENST00000354050 CLIP1P30622 1438 aa23.82■■□□□ 1.4
PLTP-201ENST00000354050 IFT140Q96RY7 1462 aa23.81■■□□□ 1.4
PLTP-201ENST00000354050 TDRD9Q8NDG6 1382 aaKnown RBP23.8■■□□□ 1.4
PLTP-201ENST00000354050 PBRM1Q86U86 1689 aa23.8■■□□□ 1.4
PLTP-201ENST00000354050 CTTNBP2Q8WZ74 1663 aa23.68■■□□□ 1.38
PLTP-201ENST00000354050 AQRO60306 1485 aaKnown RBP eCLIP23.66■■□□□ 1.388e-7■■■■■ 28.7
PLTP-201ENST00000354050 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
PLTP-201ENST00000354050 GRIN2BQ13224 1484 aa23.65■■□□□ 1.38
PLTP-201ENST00000354050 ZNF608Q9ULD9 1512 aaPredicted RBP23.64■■□□□ 1.38
PLTP-201ENST00000354050 RANGAP1P46060 587 aaPredicted RBP23.64■■□□□ 1.37
PLTP-201ENST00000354050 VPS8Q8N3P4 1428 aa23.64■■□□□ 1.37
PLTP-201ENST00000354050 ADAMTS12P58397 1594 aa23.63■■□□□ 1.37
PLTP-201ENST00000354050 ARAP1Q96P48 1450 aa23.59■■□□□ 1.37
PLTP-201ENST00000354050 TRIM26Q12899 539 aaPredicted RBP23.58■■□□□ 1.37
PLTP-201ENST00000354050 FHAD1B1AJZ9 1412 aa23.58■■□□□ 1.36
PLTP-201ENST00000354050 PCGF6Q9BYE7 350 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms