RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 AEBP2Q6ZN18 517 aaPredicted RBP19.36■□□□□ 0.69
MDM2-226ENST00000540352 CHIC1Q5VXU3 224 aa18.9■□□□□ 0.62
MDM2-226ENST00000540352 PHF23Q9BUL5 403 aaPredicted RBP16.6■□□□□ 0.25
MDM2-226ENST00000540352 SENP3Q9H4L4 574 aaPredicted RBP16.47■□□□□ 0.23
MDM2-226ENST00000540352 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
MDM2-226ENST00000540352 FOXD1Q16676 465 aa15.37■□□□□ 0.05
MDM2-226ENST00000540352 POTEDQ86YR6 584 aa15.26■□□□□ 0.03
MDM2-226ENST00000540352 ADRA2BP18089 450 aa14.66□□□□□ -0.06
MDM2-226ENST00000540352 PPP6R1Q9UPN7 881 aa14.63□□□□□ -0.07
MDM2-226ENST00000540352 MSH5O43196 834 aa14.52□□□□□ -0.08
MDM2-226ENST00000540352 PIAS4Q8N2W9 510 aaPredicted RBP14.42□□□□□ -0.1
MDM2-226ENST00000540352 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
MDM2-226ENST00000540352 SCAF1Q9H7N4 1312 aaKnown RBP13.46□□□□□ -0.25
MDM2-226ENST00000540352 KCNA4P22459 653 aa13.29□□□□□ -0.28
MDM2-226ENST00000540352 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
MDM2-226ENST00000540352 NCBP3Q53F19 620 aaKnown RBP13.26□□□□□ -0.29
MDM2-226ENST00000540352 CNKSR2Q8WXI2 1034 aa13.17□□□□□ -0.3
MDM2-226ENST00000540352 DMRT2Q9Y5R5 561 aa13.12□□□□□ -0.31
MDM2-226ENST00000540352 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
MDM2-226ENST00000540352 RNF216Q9NWF9 866 aaPredicted RBP12.89□□□□□ -0.35
MDM2-226ENST00000540352 HOXD11P31277 338 aaPredicted RBP12.83□□□□□ -0.36
MDM2-226ENST00000540352 CACNB1Q02641 598 aaPredicted RBP12.79□□□□□ -0.36
MDM2-226ENST00000540352 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
MDM2-226ENST00000540352 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
MDM2-226ENST00000540352 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
MDM2-226ENST00000540352 EHMT2Q96KQ7 1210 aa12.41□□□□□ -0.42
MDM2-226ENST00000540352 RNF39Q9H2S5 420 aa12.41□□□□□ -0.42
MDM2-226ENST00000540352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.31□□□□□ -0.441e-8■■□□□ 11.6
MDM2-226ENST00000540352 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
MDM2-226ENST00000540352 FOXD4L1Q9NU39 408 aa12.24□□□□□ -0.45
MDM2-226ENST00000540352 ZBTB22O15209 634 aa12.18□□□□□ -0.46
MDM2-226ENST00000540352 CSRNP3Q8WYN3 585 aa12.14□□□□□ -0.47
MDM2-226ENST00000540352 C1QBPQ07021 282 aaKnown RBP12.13□□□□□ -0.47
MDM2-226ENST00000540352 MYCNP04198 464 aaPredicted RBP12.06□□□□□ -0.48
MDM2-226ENST00000540352 U3KPZ7 1027 aaPredicted RBP12.05□□□□□ -0.48
MDM2-226ENST00000540352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.95□□□□□ -0.5
MDM2-226ENST00000540352 HNRNPUL2Q1KMD3 747 aaKnown RBP11.95□□□□□ -0.5
MDM2-226ENST00000540352 SAMD1Q6SPF0 538 aaPredicted RBP11.9□□□□□ -0.5
MDM2-226ENST00000540352 APLP2Q06481 763 aa11.85□□□□□ -0.51
MDM2-226ENST00000540352 POTEHQ6S545 545 aa11.81□□□□□ -0.52
MDM2-226ENST00000540352 ATXN8OSP0DMR3 200 aa11.76□□□□□ -0.53
MDM2-226ENST00000540352 CAPN15O75808 1086 aa11.73□□□□□ -0.53
MDM2-226ENST00000540352 SPINK5Q9NQ38 1064 aaPredicted RBP11.71□□□□□ -0.53
MDM2-226ENST00000540352 TRHP20396 242 aaPredicted RBP11.68□□□□□ -0.54
MDM2-226ENST00000540352 ATF5Q9Y2D1 282 aaPredicted RBP11.68□□□□□ -0.54
MDM2-226ENST00000540352 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
MDM2-226ENST00000540352 ABCB7O75027 752 aa11.5□□□□□ -0.57
MDM2-226ENST00000540352 DSG3P32926 999 aa11.48□□□□□ -0.57
MDM2-226ENST00000540352 POLA2Q14181 598 aa11.45□□□□□ -0.58
MDM2-226ENST00000540352 FBLN2P98095 1184 aa11.29□□□□□ -0.6
MDM2-226ENST00000540352 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
MDM2-226ENST00000540352 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
MDM2-226ENST00000540352 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
MDM2-226ENST00000540352 FKBP8Q14318 412 aa11.07□□□□□ -0.64
MDM2-226ENST00000540352 SPDYE4A6NLX3 237 aa11□□□□□ -0.65
MDM2-226ENST00000540352 SPDYE2BA6NHP3 402 aa10.96□□□□□ -0.65
MDM2-226ENST00000540352 SPDYE6P0CI01 402 aa10.96□□□□□ -0.65
MDM2-226ENST00000540352 SPDYE2Q495Y8 402 aa10.96□□□□□ -0.65
MDM2-226ENST00000540352 RBM42Q9BTD8 480 aaKnown RBP10.96□□□□□ -0.65
MDM2-226ENST00000540352 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
MDM2-226ENST00000540352 CHRDL2Q6WN34 429 aa10.85□□□□□ -0.67
MDM2-226ENST00000540352 SSUH2Q9Y2M2 353 aa10.84□□□□□ -0.67
MDM2-226ENST00000540352 PABPN1Q86U42 306 aaKnown RBP eCLIP10.81□□□□□ -0.68
MDM2-226ENST00000540352 AKT1S1Q96B36 256 aa10.8□□□□□ -0.68
MDM2-226ENST00000540352 SP7Q8TDD2 431 aaPredicted RBP10.79□□□□□ -0.68
MDM2-226ENST00000540352 PROM2Q8N271 834 aa10.78□□□□□ -0.68
MDM2-226ENST00000540352 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
MDM2-226ENST00000540352 SPDYE1Q8NFV5 336 aaPredicted RBP10.65□□□□□ -0.7
MDM2-226ENST00000540352 FBXO3Q9UK99 471 aa10.65□□□□□ -0.7
MDM2-226ENST00000540352 CLEC11AQ9Y240 323 aa10.65□□□□□ -0.7
MDM2-226ENST00000540352 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
MDM2-226ENST00000540352 PITPNM1O00562 1244 aa10.58□□□□□ -0.72
MDM2-226ENST00000540352 PRR29P0C7W0 189 aa10.53□□□□□ -0.72
MDM2-226ENST00000540352 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
MDM2-226ENST00000540352 VASPP50552 380 aaPredicted RBP10.49□□□□□ -0.73
MDM2-226ENST00000540352 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
MDM2-226ENST00000540352 PLEKHG5O94827 1062 aa10.45□□□□□ -0.74
MDM2-226ENST00000540352 MIER1Q8N108 512 aa10.45□□□□□ -0.74
MDM2-226ENST00000540352 FXR2P51116 673 aaKnown RBP eCLIP10.39□□□□□ -0.75
MDM2-226ENST00000540352 KLHL34Q8N239 644 aa10.37□□□□□ -0.75
MDM2-226ENST00000540352 HAX1O00165 279 aa10.36□□□□□ -0.75
MDM2-226ENST00000540352 EVX2Q03828 476 aa10.35□□□□□ -0.75
MDM2-226ENST00000540352 CREBZFQ9NS37 354 aa10.34□□□□□ -0.75
MDM2-226ENST00000540352 PRKAR2AP13861 404 aaKnown RBP10.33□□□□□ -0.76
MDM2-226ENST00000540352 CHADLQ6NUI6 762 aa10.33□□□□□ -0.76
MDM2-226ENST00000540352 ZBTB47Q9UFB7 747 aaPredicted RBP10.33□□□□□ -0.76
MDM2-226ENST00000540352 IFNLR1Q8IU57 520 aaPredicted RBP10.32□□□□□ -0.76
MDM2-226ENST00000540352 SPOCK2Q92563 424 aa10.24□□□□□ -0.77
MDM2-226ENST00000540352 NPM1P06748 294 aaKnown RBP eCLIP10.23□□□□□ -0.77
MDM2-226ENST00000540352 FARP1Q9Y4F1 1045 aaPredicted RBP10.23□□□□□ -0.77
MDM2-226ENST00000540352 MNX1P50219 401 aaPredicted RBP10.22□□□□□ -0.77
MDM2-226ENST00000540352 AMER1Q5JTC6 1135 aaPredicted RBP10.13□□□□□ -0.79
MDM2-226ENST00000540352 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
MDM2-226ENST00000540352 FAM212AQ96EL1 285 aa10.11□□□□□ -0.79
MDM2-226ENST00000540352 NUBP1P53384 320 aa10.1□□□□□ -0.79
MDM2-226ENST00000540352 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
MDM2-226ENST00000540352 DCAF8Q5TAQ9 597 aa10.09□□□□□ -0.79
MDM2-226ENST00000540352 RASEFQ8IZ41 740 aa10.09□□□□□ -0.79
MDM2-226ENST00000540352 LHX8Q68G74 356 aa10.08□□□□□ -0.8
MDM2-226ENST00000540352 TSPYL2Q9H2G4 693 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms