RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 NISCHQ9Y2I1 1504 aa44.61■■■■■ 4.73
OTUB1-210ENST00000541478 CCDC180Q9P1Z9 1646 aa38.71■■■■□ 3.79
OTUB1-210ENST00000541478 ZCCHC6Q5VYS8 1495 aaKnown RBP37.57■■■■□ 3.61
OTUB1-210ENST00000541478 DCAF1Q9Y4B6 1507 aa36.91■■■■□ 3.5
OTUB1-210ENST00000541478 DCAF8L2P0C7V8 631 aa36.73■■■■□ 3.47
OTUB1-210ENST00000541478 SHROOM4Q9ULL8 1493 aa36.69■■■■□ 3.46
OTUB1-210ENST00000541478 ABCC9O60706 1549 aa36.46■■■■□ 3.43
OTUB1-210ENST00000541478 MYO15BQ96JP2 1530 aa36.32■■■■□ 3.4
OTUB1-210ENST00000541478 NACADO15069 1562 aa35.97■■■■□ 3.35
OTUB1-210ENST00000541478 SCRIBQ14160 1630 aa35.66■■■■□ 3.3
OTUB1-210ENST00000541478 RB1CC1Q8TDY2 1594 aa35.57■■■■□ 3.28
OTUB1-210ENST00000541478 SUPT5HO00267 1087 aaKnown RBP35.53■■■■□ 3.28
OTUB1-210ENST00000541478 UNC13AQ9UPW8 1703 aa34.79■■■■□ 3.16
OTUB1-210ENST00000541478 RSF1Q96T23 1441 aaPredicted RBP34.76■■■■□ 3.16
OTUB1-210ENST00000541478 CECR2Q9BXF3 1484 aa34.59■■■■□ 3.13
OTUB1-210ENST00000541478 MROH2BQ7Z745 1585 aa34.46■■■■□ 3.11
OTUB1-210ENST00000541478 BAZ1AQ9NRL2 1556 aaPredicted RBP34.45■■■■□ 3.11
OTUB1-210ENST00000541478 BICRAQ9NZM4 1560 aa34.41■■■■□ 3.1
OTUB1-210ENST00000541478 PABPN1Q86U42 306 aaKnown RBP eCLIP34.22■■■■□ 3.078e-7■■■■□ 25.6
OTUB1-210ENST00000541478 SMARCA4P51532 1647 aa34.2■■■■□ 3.07
OTUB1-210ENST00000541478 CHIC1Q5VXU3 224 aa34.2■■■■□ 3.07
OTUB1-210ENST00000541478 WIZO95785 1651 aa34.2■■■■□ 3.07
OTUB1-210ENST00000541478 TOP2AP11388 1531 aaKnown RBP33.9■■■■□ 3.02
OTUB1-210ENST00000541478 PEG3Q9GZU2 1588 aa33.78■■■■□ 3
OTUB1-210ENST00000541478 SMARCA2P51531 1590 aa33.57■■■□□ 2.96
OTUB1-210ENST00000541478 ATAD2BQ9ULI0 1458 aa33.54■■■□□ 2.96
OTUB1-210ENST00000541478 CCDC88BA6NC98 1476 aa33.53■■■□□ 2.96
OTUB1-210ENST00000541478 EIF4G1Q04637 1599 aaKnown RBP33.45■■■□□ 2.94
OTUB1-210ENST00000541478 BAZ1BQ9UIG0 1483 aaKnown RBP33.41■■■□□ 2.94
OTUB1-210ENST00000541478 TRIM41Q8WV44 630 aa33.4■■■□□ 2.94
OTUB1-210ENST00000541478 HMGXB3Q12766 1538 aa33.19■■■□□ 2.9
OTUB1-210ENST00000541478 NCAPD3P42695 1498 aa33.18■■■□□ 2.9
OTUB1-210ENST00000541478 CC2D2AQ9P2K1 1620 aa33■■■□□ 2.87
OTUB1-210ENST00000541478 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
OTUB1-210ENST00000541478 ABCC8Q09428 1581 aa32.96■■■□□ 2.87
OTUB1-210ENST00000541478 LOC105371045A0A1W2PR82 267 aa32.89■■■□□ 2.86
OTUB1-210ENST00000541478 FAM9AQ8IZU1 332 aaPredicted RBP32.76■■■□□ 2.83
OTUB1-210ENST00000541478 WRNQ14191 1432 aaPredicted RBP eCLIP32.75■■■□□ 2.83
OTUB1-210ENST00000541478 CFTRP13569 1480 aa32.57■■■□□ 2.8
OTUB1-210ENST00000541478 EEA1Q15075 1411 aa32.55■■■□□ 2.8
OTUB1-210ENST00000541478 SYNJ1O43426 1573 aa32.55■■■□□ 2.8
OTUB1-210ENST00000541478 SOGA1O94964 1423 aa32.43■■■□□ 2.78
OTUB1-210ENST00000541478 PRDM2Q13029 1718 aa32.43■■■□□ 2.78
OTUB1-210ENST00000541478 TOP2BQ02880 1626 aa32.41■■■□□ 2.78
OTUB1-210ENST00000541478 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
OTUB1-210ENST00000541478 BIVM-ERCC5R4GMW8 1640 aa32.36■■■□□ 2.77
OTUB1-210ENST00000541478 CSRNP3Q8WYN3 585 aa32.27■■■□□ 2.76
OTUB1-210ENST00000541478 EHMT2Q96KQ7 1210 aa32.27■■■□□ 2.76
OTUB1-210ENST00000541478 RUSC2Q8N2Y8 1516 aa32.25■■■□□ 2.75
OTUB1-210ENST00000541478 CUX1P39880 1505 aa32.2■■■□□ 2.75
OTUB1-210ENST00000541478 GOLGA3Q08378 1498 aa32.1■■■□□ 2.73
OTUB1-210ENST00000541478 CEP164Q9UPV0 1460 aa32.06■■■□□ 2.72
OTUB1-210ENST00000541478 KIF21BO75037 1637 aa32.06■■■□□ 2.72
OTUB1-210ENST00000541478 TNIKQ9UKE5 1360 aa32.05■■■□□ 2.72
OTUB1-210ENST00000541478 FANCD2Q9BXW9 1451 aa32.02■■■□□ 2.72
OTUB1-210ENST00000541478 LAMC3Q9Y6N6 1575 aa32■■■□□ 2.71
OTUB1-210ENST00000541478 UBTFP17480 764 aaKnown RBP31.92■■■□□ 2.7
OTUB1-210ENST00000541478 CEP162Q5TB80 1403 aa31.92■■■□□ 2.7
OTUB1-210ENST00000541478 KIF27Q86VH2 1401 aa31.9■■■□□ 2.7
OTUB1-210ENST00000541478 NESP48681 1621 aa31.9■■■□□ 2.7
OTUB1-210ENST00000541478 PCGF6Q9BYE7 350 aa31.89■■■□□ 2.7
OTUB1-210ENST00000541478 TRIM26Q12899 539 aaPredicted RBP31.82■■■□□ 2.68
OTUB1-210ENST00000541478 DNMBPQ6XZF7 1577 aa31.81■■■□□ 2.68
OTUB1-210ENST00000541478 FGD5Q6ZNL6 1462 aa31.8■■■□□ 2.68
OTUB1-210ENST00000541478 ERICH3Q5RHP9 1530 aa31.78■■■□□ 2.68
OTUB1-210ENST00000541478 RAPGEF2Q9Y4G8 1499 aa31.77■■■□□ 2.68
OTUB1-210ENST00000541478 PDS5BQ9NTI5 1447 aa31.77■■■□□ 2.68
OTUB1-210ENST00000541478 PRXQ9BXM0 1461 aa31.75■■■□□ 2.67
OTUB1-210ENST00000541478 TOPBP1Q92547 1522 aa31.71■■■□□ 2.67
OTUB1-210ENST00000541478 CUX2O14529 1486 aa31.69■■■□□ 2.66
OTUB1-210ENST00000541478 POLA1P09884 1462 aaPredicted RBP31.6■■■□□ 2.65
OTUB1-210ENST00000541478 CLIP1P30622 1438 aa31.58■■■□□ 2.65
OTUB1-210ENST00000541478 URB2Q14146 1524 aaKnown RBP31.56■■■□□ 2.64
OTUB1-210ENST00000541478 ABCA10Q8WWZ4 1543 aa31.55■■■□□ 2.64
OTUB1-210ENST00000541478 KIF21AQ7Z4S6 1674 aa31.53■■■□□ 2.64
OTUB1-210ENST00000541478 IGF1RP08069 1367 aa31.52■■■□□ 2.64
OTUB1-210ENST00000541478 RAD54L2Q9Y4B4 1467 aa31.46■■■□□ 2.63
OTUB1-210ENST00000541478 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
OTUB1-210ENST00000541478 VPS8Q8N3P4 1428 aa31.37■■■□□ 2.61
OTUB1-210ENST00000541478 WDR97A6NE52 1622 aa31.37■■■□□ 2.61
OTUB1-210ENST00000541478 ERCC6Q03468 1493 aa31.35■■■□□ 2.61
OTUB1-210ENST00000541478 HRCP23327 699 aa31.33■■■□□ 2.61
OTUB1-210ENST00000541478 PPARGC1BQ86YN6 1023 aaKnown RBP31.31■■■□□ 2.6
OTUB1-210ENST00000541478 MRC2Q9UBG0 1479 aa31.31■■■□□ 2.6
OTUB1-210ENST00000541478 CUL7Q14999 1698 aa31.29■■■□□ 2.6
OTUB1-210ENST00000541478 ABCA5Q8WWZ7 1642 aa31.24■■■□□ 2.59
OTUB1-210ENST00000541478 RANGAP1P46060 587 aaPredicted RBP31.24■■■□□ 2.59
OTUB1-210ENST00000541478 ARAP1Q96P48 1450 aa31.18■■■□□ 2.58
OTUB1-210ENST00000541478 TARBP1Q13395 1621 aaKnown RBP31.18■■■□□ 2.58
OTUB1-210ENST00000541478 GAPVD1Q14C86 1478 aa31.17■■■□□ 2.58
OTUB1-210ENST00000541478 TDRD9Q8NDG6 1382 aaKnown RBP31.13■■■□□ 2.57
OTUB1-210ENST00000541478 APLP2Q06481 763 aa31.13■■■□□ 2.57
OTUB1-210ENST00000541478 WDR62O43379 1518 aa31.12■■■□□ 2.57
OTUB1-210ENST00000541478 ARHGAP35Q9NRY4 1499 aa31.11■■■□□ 2.57
OTUB1-210ENST00000541478 THOC2Q8NI27 1593 aaKnown RBP31.09■■■□□ 2.57
OTUB1-210ENST00000541478 TTBK1Q5TCY1 1321 aaPredicted RBP31.02■■■□□ 2.56
OTUB1-210ENST00000541478 IFT140Q96RY7 1462 aa31■■■□□ 2.55
OTUB1-210ENST00000541478 CTTNBP2Q8WZ74 1663 aa30.98■■■□□ 2.55
OTUB1-210ENST00000541478 PBRM1Q86U86 1689 aa30.95■■■□□ 2.54
OTUB1-210ENST00000541478 EFCAB5A4FU69 1503 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms