RNA–Protein interactions for RNA: ENST00000481006.1

RPS7-208, Transcript of ribosomal protein S7, humanhuman

TSL 1 (best)

Gene RPS7, Length 5,429 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS7-208ENST00000481006 NISCHQ9Y2I1 1504 aa28.55■■■□□ 2.16
RPS7-208ENST00000481006 DCAF8L2P0C7V8 631 aa26.52■■□□□ 1.84
RPS7-208ENST00000481006 PELP1Q8IZL8 1130 aaKnown RBP25.11■■□□□ 1.61
RPS7-208ENST00000481006 FAM9AQ8IZU1 332 aaPredicted RBP25.03■■□□□ 1.6
RPS7-208ENST00000481006 SHROOM4Q9ULL8 1493 aa24.82■■□□□ 1.56
RPS7-208ENST00000481006 APLP2Q06481 763 aa24.64■■□□□ 1.53
RPS7-208ENST00000481006 SUPT5HO00267 1087 aaKnown RBP24.6■■□□□ 1.53
RPS7-208ENST00000481006 ABCC9O60706 1549 aa24.39■■□□□ 1.5
RPS7-208ENST00000481006 CCDC180Q9P1Z9 1646 aa24.38■■□□□ 1.49
RPS7-208ENST00000481006 CCER1Q8TC90 406 aaPredicted RBP24■■□□□ 1.43
RPS7-208ENST00000481006 EHMT2Q96KQ7 1210 aa23.83■■□□□ 1.41
RPS7-208ENST00000481006 ZCCHC6Q5VYS8 1495 aaKnown RBP23.76■■□□□ 1.39
RPS7-208ENST00000481006 ERICH6Q7L0X2 663 aa23.74■■□□□ 1.39
RPS7-208ENST00000481006 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
RPS7-208ENST00000481006 CENPBP07199 599 aaPredicted RBP23.42■■□□□ 1.34
RPS7-208ENST00000481006 ATP1B4Q9UN42 357 aaPredicted RBP23.39■■□□□ 1.33
RPS7-208ENST00000481006 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.32
RPS7-208ENST00000481006 ZEB1P37275 1124 aaPredicted RBP23.31■■□□□ 1.32
RPS7-208ENST00000481006 NEFLP07196 543 aa23.28■■□□□ 1.32
RPS7-208ENST00000481006 NACADO15069 1562 aa23.28■■□□□ 1.32
RPS7-208ENST00000481006 SCRIBQ14160 1630 aa23.25■■□□□ 1.31
RPS7-208ENST00000481006 DCAF1Q9Y4B6 1507 aa23.15■■□□□ 1.3
RPS7-208ENST00000481006 PCGF6Q9BYE7 350 aa23.11■■□□□ 1.29
RPS7-208ENST00000481006 RANGAP1P46060 587 aaPredicted RBP23.09■■□□□ 1.29
RPS7-208ENST00000481006 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.29
RPS7-208ENST00000481006 MYT1LQ9UL68 1186 aa23.03■■□□□ 1.28
RPS7-208ENST00000481006 UBTFP17480 764 aaKnown RBP23.03■■□□□ 1.28
RPS7-208ENST00000481006 TRIM41Q8WV44 630 aa23.03■■□□□ 1.28
RPS7-208ENST00000481006 DAXXQ9UER7 740 aaPredicted RBP22.93■■□□□ 1.26
RPS7-208ENST00000481006 MYO15BQ96JP2 1530 aa22.82■■□□□ 1.24
RPS7-208ENST00000481006 MYT1Q01538 1121 aa22.75■■□□□ 1.23
RPS7-208ENST00000481006 YTHDC1Q96MU7 727 aaKnown RBP22.74■■□□□ 1.23
RPS7-208ENST00000481006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.73■■□□□ 1.23
RPS7-208ENST00000481006 HNRNPUL2Q1KMD3 747 aaKnown RBP22.73■■□□□ 1.23
RPS7-208ENST00000481006 HRCP23327 699 aa22.72■■□□□ 1.23
RPS7-208ENST00000481006 POLR3GLQ9BT43 218 aa22.44■■□□□ 1.18
RPS7-208ENST00000481006 CHIC1Q5VXU3 224 aa22.38■■□□□ 1.17
RPS7-208ENST00000481006 SLC4A1APQ9BWU0 796 aaKnown RBP22.38■■□□□ 1.17
RPS7-208ENST00000481006 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
RPS7-208ENST00000481006 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
RPS7-208ENST00000481006 CECR2Q9BXF3 1484 aa22.26■■□□□ 1.15
RPS7-208ENST00000481006 CLSPNQ9HAW4 1339 aa22.24■■□□□ 1.15
RPS7-208ENST00000481006 ZNF316A6NFI3 1004 aaPredicted RBP22.19■■□□□ 1.14
RPS7-208ENST00000481006 ZBTB47Q9UFB7 747 aaPredicted RBP22.19■■□□□ 1.14
RPS7-208ENST00000481006 ITGAEP38570 1179 aa22.16■■□□□ 1.14
RPS7-208ENST00000481006 BAZ1BQ9UIG0 1483 aaKnown RBP22.15■■□□□ 1.14
RPS7-208ENST00000481006 PPARGC1BQ86YN6 1023 aaKnown RBP22.12■■□□□ 1.13
RPS7-208ENST00000481006 RTL5Q5HYW3 569 aaPredicted RBP22.06■■□□□ 1.12
RPS7-208ENST00000481006 MROH2BQ7Z745 1585 aa22.03■■□□□ 1.12
RPS7-208ENST00000481006 TRIM26Q12899 539 aaPredicted RBP22■■□□□ 1.11
RPS7-208ENST00000481006 NEFMP07197 916 aa21.99■■□□□ 1.11
RPS7-208ENST00000481006 SMARCA2P51531 1590 aa21.94■■□□□ 1.1
RPS7-208ENST00000481006 CNGB1Q14028 1251 aaPredicted RBP21.86■■□□□ 1.09
RPS7-208ENST00000481006 LOC105371045A0A1W2PR82 267 aa21.84■■□□□ 1.09
RPS7-208ENST00000481006 TRIM52Q96A61 297 aa21.81■■□□□ 1.08
RPS7-208ENST00000481006 SMARCA4P51532 1647 aa21.81■■□□□ 1.08
RPS7-208ENST00000481006 BCANQ96GW7 911 aa21.76■■□□□ 1.07
RPS7-208ENST00000481006 ATAD2BQ9ULI0 1458 aa21.75■■□□□ 1.07
RPS7-208ENST00000481006 WIZO95785 1651 aa21.73■■□□□ 1.07
RPS7-208ENST00000481006 ESF1Q9H501 851 aaKnown RBP21.73■■□□□ 1.07
RPS7-208ENST00000481006 SLC24A1O60721 1099 aa21.72■■□□□ 1.07
RPS7-208ENST00000481006 FAM50AQ14320 339 aaKnown RBP21.7■■□□□ 1.06
RPS7-208ENST00000481006 TOP2AP11388 1531 aaKnown RBP21.69■■□□□ 1.06
RPS7-208ENST00000481006 CSRNP3Q8WYN3 585 aa21.67■■□□□ 1.06
RPS7-208ENST00000481006 CCDC88BA6NC98 1476 aa21.66■■□□□ 1.06
RPS7-208ENST00000481006 CANXP27824 592 aaKnown RBP21.62■■□□□ 1.05
RPS7-208ENST00000481006 FBLN2P98095 1184 aa21.62■■□□□ 1.05
RPS7-208ENST00000481006 EIF4G1Q04637 1599 aaKnown RBP21.61■■□□□ 1.05
RPS7-208ENST00000481006 BICRAQ9NZM4 1560 aa21.59■■□□□ 1.05
RPS7-208ENST00000481006 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.048e-7■■□□□ 13.9
RPS7-208ENST00000481006 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
RPS7-208ENST00000481006 ANP32CO43423 234 aa21.49■■□□□ 1.03
RPS7-208ENST00000481006 NCAPD3P42695 1498 aa21.49■■□□□ 1.03
RPS7-208ENST00000481006 CDK11AQ9UQ88 783 aaPredicted RBP21.47■■□□□ 1.03
RPS7-208ENST00000481006 ZNF326Q5BKZ1 582 aaKnown RBP21.45■■□□□ 1.02
RPS7-208ENST00000481006 PDS5BQ9NTI5 1447 aa21.44■■□□□ 1.02
RPS7-208ENST00000481006 CADPSQ9ULU8 1353 aa21.44■■□□□ 1.02
RPS7-208ENST00000481006 SCAF1Q9H7N4 1312 aaKnown RBP21.43■■□□□ 1.02
RPS7-208ENST00000481006 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
RPS7-208ENST00000481006 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
RPS7-208ENST00000481006 STAG3Q9UJ98 1225 aa21.38■■□□□ 1.01
RPS7-208ENST00000481006 ANP32BQ92688 251 aaKnown RBP21.36■■□□□ 1.01
RPS7-208ENST00000481006 NEUROD1Q13562 356 aa21.34■■□□□ 1.01
RPS7-208ENST00000481006 EEA1Q15075 1411 aa21.33■■□□□ 1
RPS7-208ENST00000481006 CC2D2AQ9P2K1 1620 aa21.33■■□□□ 1
RPS7-208ENST00000481006 KIF27Q86VH2 1401 aa21.28■■□□□ 1
RPS7-208ENST00000481006 DIEXFQ68CQ4 756 aaKnown RBP21.28■■□□□ 1
RPS7-208ENST00000481006 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
RPS7-208ENST00000481006 NPM2Q86SE8 214 aaKnown RBP21.23■□□□□ 0.99
RPS7-208ENST00000481006 CDK11BP21127 795 aaKnown RBP21.23■□□□□ 0.99
RPS7-208ENST00000481006 HMGXB3Q12766 1538 aa21.23■□□□□ 0.99
RPS7-208ENST00000481006 P3H3Q8IVL6 736 aa21.23■□□□□ 0.99
RPS7-208ENST00000481006 ACIN1Q9UKV3 1341 aaKnown RBP21.22■□□□□ 0.99
RPS7-208ENST00000481006 BCL11AQ9H165 835 aa21.2■□□□□ 0.98
RPS7-208ENST00000481006 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
RPS7-208ENST00000481006 GTF3C3Q9Y5Q9 886 aa21.19■□□□□ 0.98
RPS7-208ENST00000481006 UPF2Q9HAU5 1272 aaKnown RBP21.19■□□□□ 0.98
RPS7-208ENST00000481006 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
RPS7-208ENST00000481006 HSP90AA1P07900 732 aaKnown RBP21.16■□□□□ 0.98
RPS7-208ENST00000481006 FANCD2Q9BXW9 1451 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms