RNA–Protein interactions for RNA: ENST00000586146.5

FARSA-203, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

TSL 5

Gene FARSA, Length 1,707 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-203ENST00000586146 NISCHQ9Y2I1 1504 aa52.27■■■■■ 5.96
FARSA-203ENST00000586146 CCDC180Q9P1Z9 1646 aa46.05■■■■■ 4.96
FARSA-203ENST00000586146 ABCC9O60706 1549 aa44.69■■■■■ 4.74
FARSA-203ENST00000586146 ZCCHC6Q5VYS8 1495 aaKnown RBP43.66■■■■■ 4.58
FARSA-203ENST00000586146 DCAF8L2P0C7V8 631 aa43.58■■■■■ 4.57
FARSA-203ENST00000586146 NACADO15069 1562 aa43.21■■■■■ 4.51
FARSA-203ENST00000586146 DCAF1Q9Y4B6 1507 aa43.2■■■■■ 4.51
FARSA-203ENST00000586146 MYO15BQ96JP2 1530 aa43.13■■■■■ 4.49
FARSA-203ENST00000586146 RB1CC1Q8TDY2 1594 aa43.11■■■■■ 4.49
FARSA-203ENST00000586146 SCRIBQ14160 1630 aa42.22■■■■■ 4.35
FARSA-203ENST00000586146 UNC13AQ9UPW8 1703 aa42.13■■■■■ 4.34
FARSA-203ENST00000586146 PABPN1Q86U42 306 aaKnown RBP eCLIP41.96■■■■■ 4.31
FARSA-203ENST00000586146 BICRAQ9NZM4 1560 aa41.87■■■■■ 4.29
FARSA-203ENST00000586146 SHROOM4Q9ULL8 1493 aa41.83■■■■■ 4.29
FARSA-203ENST00000586146 CECR2Q9BXF3 1484 aa40.74■■■■■ 4.11
FARSA-203ENST00000586146 EIF4G1Q04637 1599 aaKnown RBP40.69■■■■■ 4.1
FARSA-203ENST00000586146 DNAJC5BQ9UF47 199 aa40.59■■■■■ 4.09
FARSA-203ENST00000586146 BAZ1AQ9NRL2 1556 aaPredicted RBP40.42■■■■■ 4.06
FARSA-203ENST00000586146 SMARCA4P51532 1647 aa40.39■■■■■ 4.06
FARSA-203ENST00000586146 CC2D2AQ9P2K1 1620 aa40.37■■■■■ 4.05
FARSA-203ENST00000586146 MROH2BQ7Z745 1585 aa40.35■■■■■ 4.05
FARSA-203ENST00000586146 RSF1Q96T23 1441 aaPredicted RBP40.12■■■■■ 4.01
FARSA-203ENST00000586146 ATAD2BQ9ULI0 1458 aa40.08■■■■■ 4.01
FARSA-203ENST00000586146 SMARCA2P51531 1590 aa39.97■■■■□ 3.99
FARSA-203ENST00000586146 PEG3Q9GZU2 1588 aa39.96■■■■□ 3.99
FARSA-203ENST00000586146 NCAPD3P42695 1498 aa39.94■■■■□ 3.98
FARSA-203ENST00000586146 WIZO95785 1651 aa39.91■■■■□ 3.98
FARSA-203ENST00000586146 BAZ1BQ9UIG0 1483 aaKnown RBP39.75■■■■□ 3.95
FARSA-203ENST00000586146 HMGXB3Q12766 1538 aa39.73■■■■□ 3.95
FARSA-203ENST00000586146 SUPT5HO00267 1087 aaKnown RBP39.66■■■■□ 3.94
FARSA-203ENST00000586146 TOP2AP11388 1531 aaKnown RBP39.47■■■■□ 3.91
FARSA-203ENST00000586146 CCDC88BA6NC98 1476 aa39.09■■■■□ 3.85
FARSA-203ENST00000586146 NESP48681 1621 aa38.87■■■■□ 3.81
FARSA-203ENST00000586146 CADPSQ9ULU8 1353 aa38.83■■■■□ 3.81
FARSA-203ENST00000586146 CFTRP13569 1480 aa38.72■■■■□ 3.79
FARSA-203ENST00000586146 LAMC3Q9Y6N6 1575 aa38.71■■■■□ 3.79
FARSA-203ENST00000586146 PDS5BQ9NTI5 1447 aa38.49■■■■□ 3.75
FARSA-203ENST00000586146 ERCC6Q03468 1493 aa38.41■■■■□ 3.74
FARSA-203ENST00000586146 FANCD2Q9BXW9 1451 aa38.38■■■■□ 3.73
FARSA-203ENST00000586146 KIF21AQ7Z4S6 1674 aa38.31■■■■□ 3.72
FARSA-203ENST00000586146 PRDM2Q13029 1718 aa38.29■■■■□ 3.72
FARSA-203ENST00000586146 CEP164Q9UPV0 1460 aa38.24■■■■□ 3.71
FARSA-203ENST00000586146 MRC2Q9UBG0 1479 aa38.05■■■■□ 3.68
FARSA-203ENST00000586146 THOC2Q8NI27 1593 aaKnown RBP38.03■■■■□ 3.68
FARSA-203ENST00000586146 URB2Q14146 1524 aaKnown RBP37.98■■■■□ 3.67
FARSA-203ENST00000586146 WDR62O43379 1518 aa37.89■■■■□ 3.66
FARSA-203ENST00000586146 ABCC8Q09428 1581 aa37.86■■■■□ 3.65
FARSA-203ENST00000586146 TOPBP1Q92547 1522 aa37.83■■■■□ 3.65
FARSA-203ENST00000586146 CUX1P39880 1505 aa37.79■■■■□ 3.64
FARSA-203ENST00000586146 DNMBPQ6XZF7 1577 aa37.79■■■■□ 3.64
FARSA-203ENST00000586146 WRNQ14191 1432 aaPredicted RBP eCLIP37.78■■■■□ 3.64
FARSA-203ENST00000586146 CUX2O14529 1486 aa37.71■■■■□ 3.63
FARSA-203ENST00000586146 SYNJ1O43426 1573 aa37.65■■■■□ 3.62
FARSA-203ENST00000586146 TOP2BQ02880 1626 aa37.57■■■■□ 3.6
FARSA-203ENST00000586146 POLA1P09884 1462 aaPredicted RBP37.57■■■■□ 3.6
FARSA-203ENST00000586146 FGD5Q6ZNL6 1462 aa37.56■■■■□ 3.6
FARSA-203ENST00000586146 BIVM-ERCC5R4GMW8 1640 aa37.52■■■■□ 3.6
FARSA-203ENST00000586146 RAD54L2Q9Y4B4 1467 aa37.45■■■■□ 3.59
FARSA-203ENST00000586146 SOGA1O94964 1423 aa37.43■■■■□ 3.58
FARSA-203ENST00000586146 IFT140Q96RY7 1462 aa37.4■■■■□ 3.58
FARSA-203ENST00000586146 TRIM41Q8WV44 630 aa37.37■■■■□ 3.57
FARSA-203ENST00000586146 CHIC1Q5VXU3 224 aa37.36■■■■□ 3.57
FARSA-203ENST00000586146 TARBP1Q13395 1621 aaKnown RBP37.35■■■■□ 3.57
FARSA-203ENST00000586146 ZNF608Q9ULD9 1512 aaPredicted RBP37.28■■■■□ 3.56
FARSA-203ENST00000586146 TDRD9Q8NDG6 1382 aaKnown RBP37.21■■■■□ 3.55
FARSA-203ENST00000586146 ABCA10Q8WWZ4 1543 aa37.2■■■■□ 3.54
FARSA-203ENST00000586146 AQRO60306 1485 aaKnown RBP eCLIP37.17■■■■□ 3.544e-7■■■■□ 21.2
FARSA-203ENST00000586146 WDR97A6NE52 1622 aa37.12■■■■□ 3.53
FARSA-203ENST00000586146 EIF4G3O43432 1585 aaKnown RBP37.06■■■■□ 3.52
FARSA-203ENST00000586146 GAPVD1Q14C86 1478 aa36.99■■■■□ 3.51
FARSA-203ENST00000586146 ABCA5Q8WWZ7 1642 aa36.96■■■■□ 3.51
FARSA-203ENST00000586146 KIF27Q86VH2 1401 aa36.92■■■■□ 3.5
FARSA-203ENST00000586146 RUSC2Q8N2Y8 1516 aa36.89■■■■□ 3.5
FARSA-203ENST00000586146 GRIN2BQ13224 1484 aa36.88■■■■□ 3.49
FARSA-203ENST00000586146 SNAPC4Q5SXM2 1469 aa36.78■■■■□ 3.48
FARSA-203ENST00000586146 PBRM1Q86U86 1689 aa36.77■■■■□ 3.48
FARSA-203ENST00000586146 IGF1RP08069 1367 aa36.76■■■■□ 3.48
FARSA-203ENST00000586146 ERICH3Q5RHP9 1530 aa36.73■■■■□ 3.47
FARSA-203ENST00000586146 MAGI1Q96QZ7 1491 aaPredicted RBP36.69■■■■□ 3.46
FARSA-203ENST00000586146 FAM9AQ8IZU1 332 aaPredicted RBP36.67■■■■□ 3.46
FARSA-203ENST00000586146 FBLN2P98095 1184 aa36.62■■■■□ 3.45
FARSA-203ENST00000586146 ADAMTS12P58397 1594 aa36.57■■■■□ 3.44
FARSA-203ENST00000586146 FHAD1B1AJZ9 1412 aa36.56■■■■□ 3.44
FARSA-203ENST00000586146 SYNJ2O15056 1496 aa36.56■■■■□ 3.44
FARSA-203ENST00000586146 CHMP7Q8WUX9 453 aaPredicted RBP36.56■■■■□ 3.44
FARSA-203ENST00000586146 EEA1Q15075 1411 aa36.56■■■■□ 3.44
FARSA-203ENST00000586146 CSRNP3Q8WYN3 585 aa36.55■■■■□ 3.44
FARSA-203ENST00000586146 CARMIL1Q5VZK9 1371 aa36.53■■■■□ 3.44
FARSA-203ENST00000586146 CUL7Q14999 1698 aa36.46■■■■□ 3.43
FARSA-203ENST00000586146 CHD1O14646 1710 aa36.44■■■■□ 3.42
FARSA-203ENST00000586146 GRIN2AQ12879 1464 aa36.42■■■■□ 3.42
FARSA-203ENST00000586146 PRXQ9BXM0 1461 aa36.39■■■■□ 3.42
FARSA-203ENST00000586146 OSCARQ8IYS5 282 aa36.37■■■■□ 3.41
FARSA-203ENST00000586146 RAPGEF2Q9Y4G8 1499 aa36.34■■■■□ 3.41
FARSA-203ENST00000586146 NUP160Q12769 1436 aa36.23■■■■□ 3.39
FARSA-203ENST00000586146 CEP170Q5SW79 1584 aa36.22■■■■□ 3.39
FARSA-203ENST00000586146 EHMT2Q96KQ7 1210 aa36.2■■■■□ 3.39
FARSA-203ENST00000586146 KIF21BO75037 1637 aa36.14■■■■□ 3.38
FARSA-203ENST00000586146 CLASP1Q7Z460 1538 aa36.1■■■■□ 3.37
FARSA-203ENST00000586146 KIAA0586Q9BVV6 1533 aa36.03■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms