RNA–Protein interactions for RNA: ENST00000393417.7

MDM2-213, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 1,683 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-213ENST00000393417 NISCHQ9Y2I1 1504 aa19.17■□□□□ 0.66
MDM2-213ENST00000393417 ABCC9O60706 1549 aa17.32■□□□□ 0.36
MDM2-213ENST00000393417 CCDC180Q9P1Z9 1646 aa17.27■□□□□ 0.36
MDM2-213ENST00000393417 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
MDM2-213ENST00000393417 NACADO15069 1562 aa16.26■□□□□ 0.19
MDM2-213ENST00000393417 UNC13AQ9UPW8 1703 aa16.24■□□□□ 0.19
MDM2-213ENST00000393417 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
MDM2-213ENST00000393417 DCAF8L2P0C7V8 631 aa16.2■□□□□ 0.18
MDM2-213ENST00000393417 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
MDM2-213ENST00000393417 BICRAQ9NZM4 1560 aa16■□□□□ 0.15
MDM2-213ENST00000393417 MYO15BQ96JP2 1530 aa15.95■□□□□ 0.14
MDM2-213ENST00000393417 ZCCHC6Q5VYS8 1495 aaKnown RBP15.9■□□□□ 0.14
MDM2-213ENST00000393417 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
MDM2-213ENST00000393417 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.12
MDM2-213ENST00000393417 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
MDM2-213ENST00000393417 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
MDM2-213ENST00000393417 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.09
MDM2-213ENST00000393417 CECR2Q9BXF3 1484 aa15.55■□□□□ 0.08
MDM2-213ENST00000393417 AEBP2Q6ZN18 517 aaPredicted RBP15.05■□□□□ -0
MDM2-213ENST00000393417 SMARCA4P51532 1647 aa15.02■□□□□ -0
MDM2-213ENST00000393417 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
MDM2-213ENST00000393417 ATAD2BQ9ULI0 1458 aa14.97□□□□□ -0.01
MDM2-213ENST00000393417 SMARCA2P51531 1590 aa14.93□□□□□ -0.02
MDM2-213ENST00000393417 HMGXB3Q12766 1538 aa14.92□□□□□ -0.02
MDM2-213ENST00000393417 ERCC6Q03468 1493 aa14.92□□□□□ -0.02
MDM2-213ENST00000393417 NESP48681 1621 aa14.89□□□□□ -0.03
MDM2-213ENST00000393417 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
MDM2-213ENST00000393417 BAZ1BQ9UIG0 1483 aaKnown RBP14.85□□□□□ -0.03
MDM2-213ENST00000393417 CUX2O14529 1486 aa14.84□□□□□ -0.03
MDM2-213ENST00000393417 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
MDM2-213ENST00000393417 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
MDM2-213ENST00000393417 PEG3Q9GZU2 1588 aa14.81□□□□□ -0.04
MDM2-213ENST00000393417 KIF21AQ7Z4S6 1674 aa14.78□□□□□ -0.04
MDM2-213ENST00000393417 THOC2Q8NI27 1593 aaKnown RBP14.76□□□□□ -0.05
MDM2-213ENST00000393417 WIZO95785 1651 aa14.71□□□□□ -0.05
MDM2-213ENST00000393417 LAMC3Q9Y6N6 1575 aa14.71□□□□□ -0.05
MDM2-213ENST00000393417 CHIC1Q5VXU3 224 aa14.58□□□□□ -0.08
MDM2-213ENST00000393417 PDS5BQ9NTI5 1447 aa14.55□□□□□ -0.08
MDM2-213ENST00000393417 CADPSQ9ULU8 1353 aa14.52□□□□□ -0.09
MDM2-213ENST00000393417 MRC2Q9UBG0 1479 aa14.5□□□□□ -0.09
MDM2-213ENST00000393417 WDR62O43379 1518 aa14.48□□□□□ -0.09
MDM2-213ENST00000393417 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
MDM2-213ENST00000393417 RSF1Q96T23 1441 aaPredicted RBP14.44□□□□□ -0.1
MDM2-213ENST00000393417 CEP164Q9UPV0 1460 aa14.44□□□□□ -0.1
MDM2-213ENST00000393417 FANCD2Q9BXW9 1451 aa14.42□□□□□ -0.1
MDM2-213ENST00000393417 PRDM2Q13029 1718 aa14.41□□□□□ -0.1
MDM2-213ENST00000393417 CFTRP13569 1480 aa14.37□□□□□ -0.11
MDM2-213ENST00000393417 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
MDM2-213ENST00000393417 TRIM41Q8WV44 630 aa14.28□□□□□ -0.12
MDM2-213ENST00000393417 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
MDM2-213ENST00000393417 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
MDM2-213ENST00000393417 TOPBP1Q92547 1522 aa14.16□□□□□ -0.14
MDM2-213ENST00000393417 EIF4G3O43432 1585 aaKnown RBP14.14□□□□□ -0.15
MDM2-213ENST00000393417 IFT140Q96RY7 1462 aa14.11□□□□□ -0.15
MDM2-213ENST00000393417 DNMBPQ6XZF7 1577 aa14.11□□□□□ -0.15
MDM2-213ENST00000393417 RIMBP3CA6NJZ7 1639 aa14.11□□□□□ -0.15
MDM2-213ENST00000393417 RIMBP3BA6NNM3 1639 aa14.11□□□□□ -0.15
MDM2-213ENST00000393417 RIMBP3Q9UFD9 1639 aa14.11□□□□□ -0.15
MDM2-213ENST00000393417 CHD1O14646 1710 aa14.1□□□□□ -0.15
MDM2-213ENST00000393417 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
MDM2-213ENST00000393417 TARBP1Q13395 1621 aaKnown RBP14.07□□□□□ -0.16
MDM2-213ENST00000393417 ABCC8Q09428 1581 aa14.02□□□□□ -0.17
MDM2-213ENST00000393417 AQRO60306 1485 aaKnown RBP eCLIP14.02□□□□□ -0.179e-7■■■■□ 20
MDM2-213ENST00000393417 POLA1P09884 1462 aaPredicted RBP14.01□□□□□ -0.17
MDM2-213ENST00000393417 ARHGEF11O15085 1522 aa14.01□□□□□ -0.17
MDM2-213ENST00000393417 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
MDM2-213ENST00000393417 CUX1P39880 1505 aa13.93□□□□□ -0.18
MDM2-213ENST00000393417 FGD5Q6ZNL6 1462 aa13.93□□□□□ -0.18
MDM2-213ENST00000393417 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
MDM2-213ENST00000393417 FBLN2P98095 1184 aa13.91□□□□□ -0.18
MDM2-213ENST00000393417 TDRD9Q8NDG6 1382 aaKnown RBP13.9□□□□□ -0.18
MDM2-213ENST00000393417 PBRM1Q86U86 1689 aa13.9□□□□□ -0.18
MDM2-213ENST00000393417 SOGA1O94964 1423 aa13.89□□□□□ -0.19
MDM2-213ENST00000393417 SNAPC4Q5SXM2 1469 aa13.89□□□□□ -0.19
MDM2-213ENST00000393417 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
MDM2-213ENST00000393417 CYB5RLQ6IPT4 315 aa13.85□□□□□ -0.19
MDM2-213ENST00000393417 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
MDM2-213ENST00000393417 SUPT5HO00267 1087 aaKnown RBP13.81□□□□□ -0.2
MDM2-213ENST00000393417 SYNJ1O43426 1573 aa13.8□□□□□ -0.2
MDM2-213ENST00000393417 GRIN2BQ13224 1484 aa13.78□□□□□ -0.2
MDM2-213ENST00000393417 MAGI1Q96QZ7 1491 aaPredicted RBP13.78□□□□□ -0.2
MDM2-213ENST00000393417 ABCA5Q8WWZ7 1642 aa13.78□□□□□ -0.2
MDM2-213ENST00000393417 SYNJ2O15056 1496 aa13.75□□□□□ -0.21
MDM2-213ENST00000393417 CHMP7Q8WUX9 453 aaPredicted RBP13.75□□□□□ -0.21
MDM2-213ENST00000393417 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
MDM2-213ENST00000393417 ABCA10Q8WWZ4 1543 aa13.72□□□□□ -0.21
MDM2-213ENST00000393417 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
MDM2-213ENST00000393417 TRHP20396 242 aaPredicted RBP13.72□□□□□ -0.21
MDM2-213ENST00000393417 ADAMTS12P58397 1594 aa13.69□□□□□ -0.22
MDM2-213ENST00000393417 TOP2BQ02880 1626 aa13.68□□□□□ -0.22
MDM2-213ENST00000393417 ERCC6L2Q5T890 1561 aa13.68□□□□□ -0.22
MDM2-213ENST00000393417 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
MDM2-213ENST00000393417 GRIN2AQ12879 1464 aa13.64□□□□□ -0.23
MDM2-213ENST00000393417 WRNQ14191 1432 aaPredicted RBP eCLIP13.63□□□□□ -0.23
MDM2-213ENST00000393417 SHROOM2Q13796 1616 aa13.58□□□□□ -0.24
MDM2-213ENST00000393417 NUP160Q12769 1436 aa13.56□□□□□ -0.24
MDM2-213ENST00000393417 ERICH3Q5RHP9 1530 aa13.55□□□□□ -0.24
MDM2-213ENST00000393417 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
MDM2-213ENST00000393417 KIF13AQ9H1H9 1805 aa13.51□□□□□ -0.25
MDM2-213ENST00000393417 RUSC2Q8N2Y8 1516 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms