RNA–Protein interactions for RNA: ENST00000423140.6

FARSA-202, Transcript of phenylalanyl-tRNA synthetase subunit alpha, humanhuman

TSL 2 BASIC

Gene FARSA, Length 1,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARSA-202ENST00000423140 NISCHQ9Y2I1 1504 aa42.87■■■■■ 4.45
FARSA-202ENST00000423140 CCDC180Q9P1Z9 1646 aa38.04■■■■□ 3.68
FARSA-202ENST00000423140 ABCC9O60706 1549 aa37.04■■■■□ 3.52
FARSA-202ENST00000423140 ZCCHC6Q5VYS8 1495 aaKnown RBP35.75■■■■□ 3.31
FARSA-202ENST00000423140 DCAF8L2P0C7V8 631 aa35.74■■■■□ 3.31
FARSA-202ENST00000423140 RB1CC1Q8TDY2 1594 aa35.69■■■■□ 3.3
FARSA-202ENST00000423140 NACADO15069 1562 aa35.69■■■■□ 3.3
FARSA-202ENST00000423140 MYO15BQ96JP2 1530 aa35.51■■■■□ 3.28
FARSA-202ENST00000423140 DCAF1Q9Y4B6 1507 aa35.45■■■■□ 3.27
FARSA-202ENST00000423140 UNC13AQ9UPW8 1703 aa35■■■■□ 3.19
FARSA-202ENST00000423140 SCRIBQ14160 1630 aa34.76■■■■□ 3.15
FARSA-202ENST00000423140 BICRAQ9NZM4 1560 aa34.65■■■■□ 3.14
FARSA-202ENST00000423140 PABPN1Q86U42 306 aaKnown RBP eCLIP34.64■■■■□ 3.14
FARSA-202ENST00000423140 SHROOM4Q9ULL8 1493 aa34.56■■■■□ 3.12
FARSA-202ENST00000423140 DNAJC5BQ9UF47 199 aa33.83■■■■□ 3.01
FARSA-202ENST00000423140 EIF4G1Q04637 1599 aaKnown RBP33.7■■■□□ 2.99
FARSA-202ENST00000423140 CC2D2AQ9P2K1 1620 aa33.53■■■□□ 2.96
FARSA-202ENST00000423140 CECR2Q9BXF3 1484 aa33.4■■■□□ 2.94
FARSA-202ENST00000423140 SMARCA4P51532 1647 aa33.25■■■□□ 2.91
FARSA-202ENST00000423140 SUPT5HO00267 1087 aaKnown RBP33.25■■■□□ 2.91
FARSA-202ENST00000423140 BAZ1AQ9NRL2 1556 aaPredicted RBP33.2■■■□□ 2.91
FARSA-202ENST00000423140 MROH2BQ7Z745 1585 aa33.06■■■□□ 2.88
FARSA-202ENST00000423140 ATAD2BQ9ULI0 1458 aa32.99■■■□□ 2.87
FARSA-202ENST00000423140 SMARCA2P51531 1590 aa32.94■■■□□ 2.86
FARSA-202ENST00000423140 NCAPD3P42695 1498 aa32.92■■■□□ 2.86
FARSA-202ENST00000423140 PEG3Q9GZU2 1588 aa32.9■■■□□ 2.86
FARSA-202ENST00000423140 RSF1Q96T23 1441 aaPredicted RBP32.85■■■□□ 2.85
FARSA-202ENST00000423140 HMGXB3Q12766 1538 aa32.8■■■□□ 2.84
FARSA-202ENST00000423140 WIZO95785 1651 aa32.76■■■□□ 2.83
FARSA-202ENST00000423140 BAZ1BQ9UIG0 1483 aaKnown RBP32.72■■■□□ 2.83
FARSA-202ENST00000423140 TOP2AP11388 1531 aaKnown RBP32.36■■■□□ 2.77
FARSA-202ENST00000423140 NESP48681 1621 aa32.13■■■□□ 2.73
FARSA-202ENST00000423140 LAMC3Q9Y6N6 1575 aa32.04■■■□□ 2.72
FARSA-202ENST00000423140 CCDC88BA6NC98 1476 aa31.99■■■□□ 2.71
FARSA-202ENST00000423140 CADPSQ9ULU8 1353 aa31.97■■■□□ 2.71
FARSA-202ENST00000423140 ERCC6Q03468 1493 aa31.89■■■□□ 2.7
FARSA-202ENST00000423140 CFTRP13569 1480 aa31.84■■■□□ 2.69
FARSA-202ENST00000423140 CHIC1Q5VXU3 224 aa31.83■■■□□ 2.69
FARSA-202ENST00000423140 KIF21AQ7Z4S6 1674 aa31.79■■■□□ 2.68
FARSA-202ENST00000423140 PDS5BQ9NTI5 1447 aa31.79■■■□□ 2.68
FARSA-202ENST00000423140 PRDM2Q13029 1718 aa31.7■■■□□ 2.66
FARSA-202ENST00000423140 FANCD2Q9BXW9 1451 aa31.63■■■□□ 2.65
FARSA-202ENST00000423140 THOC2Q8NI27 1593 aaKnown RBP31.6■■■□□ 2.65
FARSA-202ENST00000423140 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
FARSA-202ENST00000423140 MRC2Q9UBG0 1479 aa31.47■■■□□ 2.63
FARSA-202ENST00000423140 CUX2O14529 1486 aa31.46■■■□□ 2.63
FARSA-202ENST00000423140 WDR62O43379 1518 aa31.38■■■□□ 2.61
FARSA-202ENST00000423140 URB2Q14146 1524 aaKnown RBP31.32■■■□□ 2.6
FARSA-202ENST00000423140 TRIM41Q8WV44 630 aa31.24■■■□□ 2.59
FARSA-202ENST00000423140 TOPBP1Q92547 1522 aa31.15■■■□□ 2.58
FARSA-202ENST00000423140 ABCC8Q09428 1581 aa31.13■■■□□ 2.57
FARSA-202ENST00000423140 DNMBPQ6XZF7 1577 aa31.13■■■□□ 2.57
FARSA-202ENST00000423140 CUX1P39880 1505 aa31.01■■■□□ 2.55
FARSA-202ENST00000423140 WRNQ14191 1432 aaPredicted RBP eCLIP30.95■■■□□ 2.55
FARSA-202ENST00000423140 POLA1P09884 1462 aaPredicted RBP30.9■■■□□ 2.54
FARSA-202ENST00000423140 IFT140Q96RY7 1462 aa30.88■■■□□ 2.53
FARSA-202ENST00000423140 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
FARSA-202ENST00000423140 SYNJ1O43426 1573 aa30.82■■■□□ 2.52
FARSA-202ENST00000423140 TARBP1Q13395 1621 aaKnown RBP30.82■■■□□ 2.52
FARSA-202ENST00000423140 BIVM-ERCC5R4GMW8 1640 aa30.79■■■□□ 2.52
FARSA-202ENST00000423140 TOP2BQ02880 1626 aa30.79■■■□□ 2.52
FARSA-202ENST00000423140 RAD54L2Q9Y4B4 1467 aa30.78■■■□□ 2.52
FARSA-202ENST00000423140 ZNF608Q9ULD9 1512 aaPredicted RBP30.77■■■□□ 2.52
FARSA-202ENST00000423140 SOGA1O94964 1423 aa30.76■■■□□ 2.51
FARSA-202ENST00000423140 FAM9AQ8IZU1 332 aaPredicted RBP30.7■■■□□ 2.5
FARSA-202ENST00000423140 EIF4G3O43432 1585 aaKnown RBP30.67■■■□□ 2.5
FARSA-202ENST00000423140 WDR97A6NE52 1622 aa30.64■■■□□ 2.5
FARSA-202ENST00000423140 LOC105371045A0A1W2PR82 267 aa30.62■■■□□ 2.49
FARSA-202ENST00000423140 AQRO60306 1485 aaKnown RBP eCLIP30.62■■■□□ 2.494e-7■■■■□ 21.2
FARSA-202ENST00000423140 TDRD9Q8NDG6 1382 aaKnown RBP30.58■■■□□ 2.49
FARSA-202ENST00000423140 ABCA10Q8WWZ4 1543 aa30.56■■■□□ 2.48
FARSA-202ENST00000423140 EEA1Q15075 1411 aa30.46■■■□□ 2.47
FARSA-202ENST00000423140 ABCA5Q8WWZ7 1642 aa30.45■■■□□ 2.46
FARSA-202ENST00000423140 RUSC2Q8N2Y8 1516 aa30.43■■■□□ 2.46
FARSA-202ENST00000423140 GAPVD1Q14C86 1478 aa30.42■■■□□ 2.46
FARSA-202ENST00000423140 PBRM1Q86U86 1689 aa30.4■■■□□ 2.46
FARSA-202ENST00000423140 GRIN2BQ13224 1484 aa30.37■■■□□ 2.45
FARSA-202ENST00000423140 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
FARSA-202ENST00000423140 CSRNP3Q8WYN3 585 aa30.3■■■□□ 2.44
FARSA-202ENST00000423140 CHD1O14646 1710 aa30.28■■■□□ 2.44
FARSA-202ENST00000423140 EHMT2Q96KQ7 1210 aa30.27■■■□□ 2.44
FARSA-202ENST00000423140 MAGI1Q96QZ7 1491 aaPredicted RBP30.27■■■□□ 2.44
FARSA-202ENST00000423140 DNAJC5Q9H3Z4 198 aa30.27■■■□□ 2.44
FARSA-202ENST00000423140 KIF27Q86VH2 1401 aa30.2■■■□□ 2.42
FARSA-202ENST00000423140 ERICH3Q5RHP9 1530 aa30.19■■■□□ 2.42
FARSA-202ENST00000423140 FBLN2P98095 1184 aa30.19■■■□□ 2.42
FARSA-202ENST00000423140 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
FARSA-202ENST00000423140 SYNJ2O15056 1496 aa30.16■■■□□ 2.42
FARSA-202ENST00000423140 ADAMTS12P58397 1594 aa30.13■■■□□ 2.41
FARSA-202ENST00000423140 CHMP7Q8WUX9 453 aaPredicted RBP30.12■■■□□ 2.41
FARSA-202ENST00000423140 KIF21BO75037 1637 aa30.09■■■□□ 2.41
FARSA-202ENST00000423140 GOLGA3Q08378 1498 aa30.06■■■□□ 2.4
FARSA-202ENST00000423140 FHAD1B1AJZ9 1412 aa30.05■■■□□ 2.4
FARSA-202ENST00000423140 IGF1RP08069 1367 aa30.05■■■□□ 2.4
FARSA-202ENST00000423140 GRIN2AQ12879 1464 aa30■■■□□ 2.39
FARSA-202ENST00000423140 CUL7Q14999 1698 aa29.98■■■□□ 2.39
FARSA-202ENST00000423140 TNIKQ9UKE5 1360 aa29.96■■■□□ 2.39
FARSA-202ENST00000423140 UBTFP17480 764 aaKnown RBP29.93■■■□□ 2.38
FARSA-202ENST00000423140 PRXQ9BXM0 1461 aa29.93■■■□□ 2.38
FARSA-202ENST00000423140 RAPGEF2Q9Y4G8 1499 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms