RNA–Protein interactions for RNA: ENST00000490903.5

CKAP2-207, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CKAP2, Length 3,395 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-207ENST00000490903 NISCHQ9Y2I1 1504 aa13.14□□□□□ -0.31
CKAP2-207ENST00000490903 ABCC9O60706 1549 aa11.85□□□□□ -0.51
CKAP2-207ENST00000490903 AEBP2Q6ZN18 517 aaPredicted RBP11.7□□□□□ -0.54
CKAP2-207ENST00000490903 CCDC180Q9P1Z9 1646 aa11.64□□□□□ -0.55
CKAP2-207ENST00000490903 DCAF8L2P0C7V8 631 aa11.43□□□□□ -0.58
CKAP2-207ENST00000490903 CHIC1Q5VXU3 224 aa11.29□□□□□ -0.6
CKAP2-207ENST00000490903 RB1CC1Q8TDY2 1594 aa11.16□□□□□ -0.62
CKAP2-207ENST00000490903 PABPN1Q86U42 306 aaKnown RBP eCLIP11.14□□□□□ -0.63
CKAP2-207ENST00000490903 DNAJC5BQ9UF47 199 aa11.1□□□□□ -0.63
CKAP2-207ENST00000490903 NACADO15069 1562 aa11.07□□□□□ -0.64
CKAP2-207ENST00000490903 ZCCHC6Q5VYS8 1495 aaKnown RBP10.86□□□□□ -0.67
CKAP2-207ENST00000490903 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
CKAP2-207ENST00000490903 MYO15BQ96JP2 1530 aa10.84□□□□□ -0.67
CKAP2-207ENST00000490903 BICRAQ9NZM4 1560 aa10.8□□□□□ -0.68
CKAP2-207ENST00000490903 SCRIBQ14160 1630 aa10.79□□□□□ -0.68
CKAP2-207ENST00000490903 DCAF1Q9Y4B6 1507 aa10.74□□□□□ -0.69
CKAP2-207ENST00000490903 CECR2Q9BXF3 1484 aa10.62□□□□□ -0.71
CKAP2-207ENST00000490903 CC2D2AQ9P2K1 1620 aa10.6□□□□□ -0.71
CKAP2-207ENST00000490903 EIF4G1Q04637 1599 aaKnown RBP10.58□□□□□ -0.72
CKAP2-207ENST00000490903 SHROOM4Q9ULL8 1493 aa10.57□□□□□ -0.72
CKAP2-207ENST00000490903 ATAD2BQ9ULI0 1458 aa10.26□□□□□ -0.77
CKAP2-207ENST00000490903 NCAPD3P42695 1498 aa10.25□□□□□ -0.77
CKAP2-207ENST00000490903 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
CKAP2-207ENST00000490903 SMARCA4P51532 1647 aa10.21□□□□□ -0.77
CKAP2-207ENST00000490903 SMARCA2P51531 1590 aa10.19□□□□□ -0.78
CKAP2-207ENST00000490903 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
CKAP2-207ENST00000490903 BAZ1AQ9NRL2 1556 aaPredicted RBP10.18□□□□□ -0.78
CKAP2-207ENST00000490903 NESP48681 1621 aa10.17□□□□□ -0.78
CKAP2-207ENST00000490903 MROH2BQ7Z745 1585 aa10.16□□□□□ -0.78
CKAP2-207ENST00000490903 SENP3Q9H4L4 574 aaPredicted RBP10.14□□□□□ -0.79
CKAP2-207ENST00000490903 DNAJC5Q9H3Z4 198 aa10.13□□□□□ -0.79
CKAP2-207ENST00000490903 HMGXB3Q12766 1538 aa10.12□□□□□ -0.79
CKAP2-207ENST00000490903 CUX2O14529 1486 aa10.05□□□□□ -0.8
CKAP2-207ENST00000490903 WIZO95785 1651 aa10.04□□□□□ -0.8
CKAP2-207ENST00000490903 PEG3Q9GZU2 1588 aa10.03□□□□□ -0.8
CKAP2-207ENST00000490903 PDS5BQ9NTI5 1447 aa10.02□□□□□ -0.81
CKAP2-207ENST00000490903 CADPSQ9ULU8 1353 aa10.01□□□□□ -0.81
CKAP2-207ENST00000490903 LAMC3Q9Y6N6 1575 aa9.98□□□□□ -0.81
CKAP2-207ENST00000490903 RSF1Q96T23 1441 aaPredicted RBP9.98□□□□□ -0.81
CKAP2-207ENST00000490903 KIF21AQ7Z4S6 1674 aa9.94□□□□□ -0.82
CKAP2-207ENST00000490903 THOC2Q8NI27 1593 aaKnown RBP9.91□□□□□ -0.82
CKAP2-207ENST00000490903 MRC2Q9UBG0 1479 aa9.89□□□□□ -0.83
CKAP2-207ENST00000490903 FANCD2Q9BXW9 1451 aa9.89□□□□□ -0.83
CKAP2-207ENST00000490903 CEP164Q9UPV0 1460 aa9.88□□□□□ -0.83
CKAP2-207ENST00000490903 TRIM41Q8WV44 630 aa9.87□□□□□ -0.83
CKAP2-207ENST00000490903 PHF23Q9BUL5 403 aaPredicted RBP9.87□□□□□ -0.83
CKAP2-207ENST00000490903 TOP2AP11388 1531 aaKnown RBP9.86□□□□□ -0.83
CKAP2-207ENST00000490903 CFTRP13569 1480 aa9.85□□□□□ -0.83
CKAP2-207ENST00000490903 CCDC88BA6NC98 1476 aa9.83□□□□□ -0.84
CKAP2-207ENST00000490903 SUPT5HO00267 1087 aaKnown RBP9.83□□□□□ -0.84
CKAP2-207ENST00000490903 WDR62O43379 1518 aa9.8□□□□□ -0.84
CKAP2-207ENST00000490903 OSCARQ8IYS5 282 aa9.78□□□□□ -0.84
CKAP2-207ENST00000490903 URB2Q14146 1524 aaKnown RBP9.78□□□□□ -0.84
CKAP2-207ENST00000490903 FBLN2P98095 1184 aa9.74□□□□□ -0.85
CKAP2-207ENST00000490903 ZNF608Q9ULD9 1512 aaPredicted RBP9.7□□□□□ -0.86
CKAP2-207ENST00000490903 TOPBP1Q92547 1522 aa9.68□□□□□ -0.86
CKAP2-207ENST00000490903 IFT140Q96RY7 1462 aa9.66□□□□□ -0.86
CKAP2-207ENST00000490903 AQRO60306 1485 aaKnown RBP eCLIP9.66□□□□□ -0.862e-11■■■■■ 34.2
CKAP2-207ENST00000490903 TDRD9Q8NDG6 1382 aaKnown RBP9.64□□□□□ -0.87
CKAP2-207ENST00000490903 ABCC8Q09428 1581 aa9.63□□□□□ -0.87
CKAP2-207ENST00000490903 RAD54L2Q9Y4B4 1467 aa9.62□□□□□ -0.87
CKAP2-207ENST00000490903 PRDM2Q13029 1718 aa9.62□□□□□ -0.87
CKAP2-207ENST00000490903 CYB5RLQ6IPT4 315 aa9.62□□□□□ -0.87
CKAP2-207ENST00000490903 SOGA1O94964 1423 aa9.62□□□□□ -0.87
CKAP2-207ENST00000490903 DNMBPQ6XZF7 1577 aa9.61□□□□□ -0.87
CKAP2-207ENST00000490903 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-207ENST00000490903 CHMP7Q8WUX9 453 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-207ENST00000490903 EIF4G3O43432 1585 aaKnown RBP9.56□□□□□ -0.88
CKAP2-207ENST00000490903 FGD5Q6ZNL6 1462 aa9.56□□□□□ -0.88
CKAP2-207ENST00000490903 TRHP20396 242 aaPredicted RBP9.54□□□□□ -0.88
CKAP2-207ENST00000490903 CUX1P39880 1505 aa9.53□□□□□ -0.88
CKAP2-207ENST00000490903 TARBP1Q13395 1621 aaKnown RBP9.53□□□□□ -0.88
CKAP2-207ENST00000490903 RIMBP3CA6NJZ7 1639 aa9.51□□□□□ -0.89
CKAP2-207ENST00000490903 RIMBP3BA6NNM3 1639 aa9.51□□□□□ -0.89
CKAP2-207ENST00000490903 RIMBP3Q9UFD9 1639 aa9.51□□□□□ -0.89
CKAP2-207ENST00000490903 ARHGEF11O15085 1522 aa9.51□□□□□ -0.89
CKAP2-207ENST00000490903 SNAPC4Q5SXM2 1469 aa9.51□□□□□ -0.89
CKAP2-207ENST00000490903 CHD1O14646 1710 aa9.48□□□□□ -0.89
CKAP2-207ENST00000490903 GRIN2BQ13224 1484 aa9.47□□□□□ -0.89
CKAP2-207ENST00000490903 GAPVD1Q14C86 1478 aa9.46□□□□□ -0.89
CKAP2-207ENST00000490903 WRNQ14191 1432 aaPredicted RBP eCLIP9.44□□□□□ -0.9
CKAP2-207ENST00000490903 MAGI1Q96QZ7 1491 aaPredicted RBP9.42□□□□□ -0.9
CKAP2-207ENST00000490903 ARAP1Q96P48 1450 aa9.42□□□□□ -0.9
CKAP2-207ENST00000490903 SYNJ2O15056 1496 aa9.41□□□□□ -0.9
CKAP2-207ENST00000490903 ABCA10Q8WWZ4 1543 aa9.4□□□□□ -0.9
CKAP2-207ENST00000490903 SYNJ1O43426 1573 aa9.39□□□□□ -0.91
CKAP2-207ENST00000490903 TTBK1Q5TCY1 1321 aaPredicted RBP9.37□□□□□ -0.91
CKAP2-207ENST00000490903 PBRM1Q86U86 1689 aa9.35□□□□□ -0.91
CKAP2-207ENST00000490903 WDR97A6NE52 1622 aa9.35□□□□□ -0.91
CKAP2-207ENST00000490903 TOP2BQ02880 1626 aa9.35□□□□□ -0.91
CKAP2-207ENST00000490903 CLASP1Q7Z460 1538 aa9.34□□□□□ -0.91
CKAP2-207ENST00000490903 GRIN2AQ12879 1464 aa9.34□□□□□ -0.91
CKAP2-207ENST00000490903 ABCA5Q8WWZ7 1642 aa9.33□□□□□ -0.92
CKAP2-207ENST00000490903 JPH4Q96JJ6 628 aa9.33□□□□□ -0.92
CKAP2-207ENST00000490903 FHAD1B1AJZ9 1412 aa9.33□□□□□ -0.92
CKAP2-207ENST00000490903 FOXD1Q16676 465 aa9.32□□□□□ -0.92
CKAP2-207ENST00000490903 BIVM-ERCC5R4GMW8 1640 aa9.3□□□□□ -0.92
CKAP2-207ENST00000490903 ERCC6L2Q5T890 1561 aa9.29□□□□□ -0.92
CKAP2-207ENST00000490903 ADAMTS12P58397 1594 aa9.28□□□□□ -0.92
CKAP2-207ENST00000490903 PRG4Q92954 1404 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms