RNA–Protein interactions for RNA: ENST00000299252.8

MDM2-203, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene MDM2, Length 966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-203ENST00000299252 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
MDM2-203ENST00000299252 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
MDM2-203ENST00000299252 SENP3Q9H4L4 574 aaPredicted RBP17.14■□□□□ 0.33
MDM2-203ENST00000299252 PHF23Q9BUL5 403 aaPredicted RBP16.96■□□□□ 0.31
MDM2-203ENST00000299252 PLPPR3Q6T4P5 718 aa15.85■□□□□ 0.13
MDM2-203ENST00000299252 FOXD1Q16676 465 aa15.76■□□□□ 0.11
MDM2-203ENST00000299252 ADRA2BP18089 450 aa15.02■□□□□ -0
MDM2-203ENST00000299252 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
MDM2-203ENST00000299252 PIAS4Q8N2W9 510 aaPredicted RBP14.93□□□□□ -0.02
MDM2-203ENST00000299252 MSH5O43196 834 aa14.78□□□□□ -0.04
MDM2-203ENST00000299252 SCAF1Q9H7N4 1312 aaKnown RBP14.04□□□□□ -0.16
MDM2-203ENST00000299252 KCNA4P22459 653 aa14.01□□□□□ -0.17
MDM2-203ENST00000299252 PPP4R3CPQ6ZMV5 832 aa13.88□□□□□ -0.19
MDM2-203ENST00000299252 EHMT2Q96KQ7 1210 aa13.72□□□□□ -0.21
MDM2-203ENST00000299252 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
MDM2-203ENST00000299252 MAPK8IP2Q13387 824 aaPredicted RBP13.62□□□□□ -0.23
MDM2-203ENST00000299252 DMRT2Q9Y5R5 561 aa13.59□□□□□ -0.23
MDM2-203ENST00000299252 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
MDM2-203ENST00000299252 POTEDQ86YR6 584 aa13.49□□□□□ -0.25
MDM2-203ENST00000299252 SLC4A1APQ9BWU0 796 aaKnown RBP13.46□□□□□ -0.25
MDM2-203ENST00000299252 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
MDM2-203ENST00000299252 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
MDM2-203ENST00000299252 HOXD11P31277 338 aaPredicted RBP13.26□□□□□ -0.29
MDM2-203ENST00000299252 CSRNP3Q8WYN3 585 aa13.22□□□□□ -0.29
MDM2-203ENST00000299252 DCAF8L1A6NGE4 600 aa13.07□□□□□ -0.32
MDM2-203ENST00000299252 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
MDM2-203ENST00000299252 ZBTB22O15209 634 aa12.86□□□□□ -0.35
MDM2-203ENST00000299252 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
MDM2-203ENST00000299252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.72□□□□□ -0.371e-8■■□□□ 11.6
MDM2-203ENST00000299252 RNF39Q9H2S5 420 aa12.52□□□□□ -0.41
MDM2-203ENST00000299252 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
MDM2-203ENST00000299252 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
MDM2-203ENST00000299252 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
MDM2-203ENST00000299252 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
MDM2-203ENST00000299252 APLP2Q06481 763 aa12.4□□□□□ -0.42
MDM2-203ENST00000299252 CACNB1Q02641 598 aaPredicted RBP12.37□□□□□ -0.43
MDM2-203ENST00000299252 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
MDM2-203ENST00000299252 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
MDM2-203ENST00000299252 SAMD1Q6SPF0 538 aaPredicted RBP12.32□□□□□ -0.44
MDM2-203ENST00000299252 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
MDM2-203ENST00000299252 CAPN15O75808 1086 aa12.12□□□□□ -0.47
MDM2-203ENST00000299252 ZNF219Q9P2Y4 722 aaPredicted RBP12.1□□□□□ -0.47
MDM2-203ENST00000299252 SPINK5Q9NQ38 1064 aaPredicted RBP12.02□□□□□ -0.49
MDM2-203ENST00000299252 TRHP20396 242 aaPredicted RBP12.01□□□□□ -0.49
MDM2-203ENST00000299252 FKBP8Q14318 412 aa12□□□□□ -0.49
MDM2-203ENST00000299252 ATF5Q9Y2D1 282 aaPredicted RBP11.93□□□□□ -0.5
MDM2-203ENST00000299252 DSG3P32926 999 aa11.86□□□□□ -0.51
MDM2-203ENST00000299252 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
MDM2-203ENST00000299252 ABCB7O75027 752 aa11.79□□□□□ -0.52
MDM2-203ENST00000299252 POLA2Q14181 598 aa11.77□□□□□ -0.53
MDM2-203ENST00000299252 RTN4Q9NQC3 1192 aaKnown RBP11.77□□□□□ -0.53
MDM2-203ENST00000299252 ZBTB12Q9Y330 459 aaPredicted RBP11.76□□□□□ -0.53
MDM2-203ENST00000299252 FBLN2P98095 1184 aa11.62□□□□□ -0.55
MDM2-203ENST00000299252 RBM42Q9BTD8 480 aaKnown RBP11.51□□□□□ -0.57
MDM2-203ENST00000299252 SLC24A1O60721 1099 aa11.5□□□□□ -0.57
MDM2-203ENST00000299252 SPDYE4A6NLX3 237 aa11.47□□□□□ -0.57
MDM2-203ENST00000299252 MKRN4PQ13434 485 aaPredicted RBP11.42□□□□□ -0.58
MDM2-203ENST00000299252 FBXO3Q9UK99 471 aa11.41□□□□□ -0.58
MDM2-203ENST00000299252 OSCARQ8IYS5 282 aa11.34□□□□□ -0.59
MDM2-203ENST00000299252 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
MDM2-203ENST00000299252 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
MDM2-203ENST00000299252 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
MDM2-203ENST00000299252 PROM2Q8N271 834 aa11.26□□□□□ -0.61
MDM2-203ENST00000299252 AKT1S1Q96B36 256 aa11.26□□□□□ -0.61
MDM2-203ENST00000299252 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
MDM2-203ENST00000299252 VASPP50552 380 aaPredicted RBP11.23□□□□□ -0.61
MDM2-203ENST00000299252 SSUH2Q9Y2M2 353 aa11.14□□□□□ -0.63
MDM2-203ENST00000299252 IFNLR1Q8IU57 520 aaPredicted RBP11.09□□□□□ -0.63
MDM2-203ENST00000299252 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
MDM2-203ENST00000299252 DCAF8L2P0C7V8 631 aa11.05□□□□□ -0.64
MDM2-203ENST00000299252 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
MDM2-203ENST00000299252 SPDYE1Q8NFV5 336 aaPredicted RBP11.05□□□□□ -0.64
MDM2-203ENST00000299252 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
MDM2-203ENST00000299252 KLHL34Q8N239 644 aa10.99□□□□□ -0.65
MDM2-203ENST00000299252 CHRDL2Q6WN34 429 aa10.94□□□□□ -0.66
MDM2-203ENST00000299252 CLEC11AQ9Y240 323 aa10.94□□□□□ -0.66
MDM2-203ENST00000299252 PITPNM1O00562 1244 aa10.92□□□□□ -0.66
MDM2-203ENST00000299252 PLCD3Q8N3E9 789 aa10.92□□□□□ -0.66
MDM2-203ENST00000299252 SPOCK2Q92563 424 aa10.91□□□□□ -0.66
MDM2-203ENST00000299252 PKD2Q13563 968 aa10.9□□□□□ -0.66
MDM2-203ENST00000299252 PLCB2Q00722 1185 aa10.88□□□□□ -0.67
MDM2-203ENST00000299252 PRR29P0C7W0 189 aa10.87□□□□□ -0.67
MDM2-203ENST00000299252 MIER1Q8N108 512 aa10.85□□□□□ -0.67
MDM2-203ENST00000299252 ECM2O94769 699 aaPredicted RBP10.82□□□□□ -0.68
MDM2-203ENST00000299252 PLEKHG5O94827 1062 aa10.81□□□□□ -0.68
MDM2-203ENST00000299252 HAP1P54257 671 aaPredicted RBP10.81□□□□□ -0.68
MDM2-203ENST00000299252 FXR2P51116 673 aaKnown RBP eCLIP10.76□□□□□ -0.69
MDM2-203ENST00000299252 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
MDM2-203ENST00000299252 PIP4P2Q8N4L2 257 aa10.73□□□□□ -0.69
MDM2-203ENST00000299252 POTEHQ6S545 545 aa10.71□□□□□ -0.69
MDM2-203ENST00000299252 CIZ1Q9ULV3 898 aaPredicted RBP10.71□□□□□ -0.69
MDM2-203ENST00000299252 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.7□□□□□ -0.7
MDM2-203ENST00000299252 PRKAR2AP13861 404 aaKnown RBP10.69□□□□□ -0.7
MDM2-203ENST00000299252 RGL2O15211 777 aa10.66□□□□□ -0.7
MDM2-203ENST00000299252 BBXQ8WY36 941 aaPredicted RBP10.65□□□□□ -0.7
MDM2-203ENST00000299252 NPM1P06748 294 aaKnown RBP eCLIP10.61□□□□□ -0.71
MDM2-203ENST00000299252 PAXIP1Q6ZW49 1069 aaPredicted RBP10.61□□□□□ -0.71
MDM2-203ENST00000299252 CFAP44Q96MT7 982 aa10.61□□□□□ -0.71
MDM2-203ENST00000299252 CHADLQ6NUI6 762 aa10.58□□□□□ -0.72
MDM2-203ENST00000299252 CREBZFQ9NS37 354 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms